RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	YEL020C	P39994	560 aa		2.27	□□□□□ -2.05
LRE1	YCL051W	CCT7	P42943	550 aa	Known RBP	2.27	□□□□□ -2.05
LRE1	YCL051W	SNU71	P53207	620 aa	Known RBP	2.27	□□□□□ -2.05
LRE1	YCL051W	CIR2	Q08822	631 aa		2.27	□□□□□ -2.05
LRE1	YCL051W	IML1	P47170	1584 aa		2.27	□□□□□ -2.05
LRE1	YCL051W	NUP188	P52593	1655 aa	Known RBP	2.26	□□□□□ -2.05
LRE1	YCL051W	HOM2	P13663	365 aa	Known RBP	2.26	□□□□□ -2.05
LRE1	YCL051W	ATE1	P16639	503 aa		2.26	□□□□□ -2.05
LRE1	YCL051W	CDC48	P25694	835 aa	Known RBP	2.26	□□□□□ -2.05
LRE1	YCL051W	SPC110	P32380	944 aa		2.26	□□□□□ -2.05
LRE1	YCL051W	SWE1	P32944	819 aa		2.26	□□□□□ -2.05
LRE1	YCL051W	GGA2	P38817	585 aa	Known RBP	2.26	□□□□□ -2.05
LRE1	YCL051W	YJL206C	P39529	758 aa		2.26	□□□□□ -2.05
LRE1	YCL051W	SNF7	P39929	240 aa	Known RBP	2.26	□□□□□ -2.05
LRE1	YCL051W	FYV10	P40492	516 aa		2.26	□□□□□ -2.05
LRE1	YCL051W	MPS1	P54199	764 aa		2.26	□□□□□ -2.05
LRE1	YCL051W	SMX3	P54999	86 aa	Predicted RBP	2.26	□□□□□ -2.05
LRE1	YCL051W	SSL2	Q00578	843 aa		2.26	□□□□□ -2.05
LRE1	YCL051W	SEC7	P11075	2009 aa	Known RBP	2.26	□□□□□ -2.05
LRE1	YCL051W	TY1B-NL2	Q99337	1749 aa	Known RBP	2.26	□□□□□ -2.05
LRE1	YCL051W	NMD2	P38798	1089 aa	Known RBP	2.26	□□□□□ -2.05
LRE1	YCL051W	YIL108W	P40483	696 aa	Known RBP	2.26	□□□□□ -2.05
LRE1	YCL051W	MAK10	Q02197	733 aa		2.26	□□□□□ -2.05
LRE1	YCL051W	HSP82	P02829	709 aa	Known RBP	2.25	□□□□□ -2.05
LRE1	YCL051W	CDC34	P14682	295 aa		2.25	□□□□□ -2.05
LRE1	YCL051W	PTP1	P25044	335 aa		2.25	□□□□□ -2.05
LRE1	YCL051W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.25	□□□□□ -2.05	not detected
LRE1	YCL051W	YAP3	P38749	330 aa		2.25	□□□□□ -2.05
LRE1	YCL051W	RRP15	Q06511	250 aa	Predicted RBP	2.25	□□□□□ -2.05
LRE1	YCL051W	ETT1	Q08421	412 aa	Known RBP	2.25	□□□□□ -2.05
LRE1	YCL051W	OSW1	Q08692	278 aa		2.25	□□□□□ -2.05
LRE1	YCL051W	RPN13	O13563	156 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	TOP1	P04786	769 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	VPS34	P22543	875 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	PRS1	P32895	427 aa	Known RBP	2.24	□□□□□ -2.05
LRE1	YCL051W	OPY1	P38271	328 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	FMP52	P40008	231 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	NET1	P47035	1189 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	TEL2	P53038	688 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	MDG1	P53885	366 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	DOS2	P54858	310 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	SPO20	Q04359	397 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	ESC2	Q06340	456 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	PLP2	Q12017	286 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	CAT8	P39113	1433 aa		2.24	□□□□□ -2.05
LRE1	YCL051W	HAP1	P0CE41	1502 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	STE4	P18851	423 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	NPP1	P25353	742 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	HEM3	P28789	327 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	LTP1	P40347	161 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	RAD26	P40352	1085 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	VHR1	P40522	640 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	YIR042C	P40586	236 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	MEP2	P41948	499 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	EAF7	P53911	425 aa	Known RBP	2.23	□□□□□ -2.05
LRE1	YCL051W	VPS30	Q02948	557 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	DUS3	Q06053	668 aa	Known RBP	2.23	□□□□□ -2.05
LRE1	YCL051W	VMR1	P38735	1592 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	PET112	P33893	541 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	MNR2	P35724	969 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	YHR078W	P38799	552 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	PAC2	P39937	518 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	VPS4	P52917	437 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	PIL1	P53252	339 aa	Known RBP	2.23	□□□□□ -2.05
LRE1	YCL051W	ASI2	P53895	289 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	ASM4	Q05166	528 aa		2.23	□□□□□ -2.05
LRE1	YCL051W	GEA1	P47102	1408 aa	Predicted RBP	2.22	□□□□□ -2.05
LRE1	YCL051W	ASF1	P32447	279 aa		2.22	□□□□□ -2.05
LRE1	YCL051W	TYE7	P33122	291 aa	Predicted RBP	2.22	□□□□□ -2.05
LRE1	YCL051W	AFR1	P33304	620 aa		2.22	□□□□□ -2.05
LRE1	YCL051W	PAF1	P38351	445 aa		2.22	□□□□□ -2.05
LRE1	YCL051W	BCD1	P38772	366 aa		2.22	□□□□□ -2.05
LRE1	YCL051W	HSV2	P50079	448 aa	Predicted RBP	2.22	□□□□□ -2.05
LRE1	YCL051W	NNF2	P53253	936 aa		2.22	□□□□□ -2.05
LRE1	YCL051W	ORC1	P54784	914 aa	Predicted RBP	2.22	□□□□□ -2.05
LRE1	YCL051W	CFT1	Q06632	1357 aa	Known RBP	2.22	□□□□□ -2.05
LRE1	YCL051W	LAT1	P12695	482 aa	Known RBP	2.21	□□□□□ -2.06
LRE1	YCL051W	TOA1	P32773	286 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	RPS0A	P32905	252 aa	Known RBP	2.21	□□□□□ -2.06
LRE1	YCL051W	HIS7	P33734	552 aa	Known RBP	2.21	□□□□□ -2.06
LRE1	YCL051W	UBS1	P38290	277 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	SIC1	P38634	284 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	MBP1	P39678	833 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	YKR011C	Q02209	353 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	ECM16	Q04217	1267 aa	Known RBP	2.21	□□□□□ -2.06
LRE1	YCL051W	YLR149C	Q99296	730 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	MPH2	P0CD99	609 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	NDC80	P40460	691 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	HOS4	P40480	1083 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.21	□□□□□ -2.06	not detected
LRE1	YCL051W	HDA1	P53973	706 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	SUB1	P54000	292 aa	Known RBP	2.21	□□□□□ -2.06
LRE1	YCL051W	TLG1	Q03322	224 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	YSH1	Q06224	779 aa	Predicted RBP	2.21	□□□□□ -2.06
LRE1	YCL051W	GEP3	Q08622	556 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	HIF1	Q12373	385 aa		2.21	□□□□□ -2.06
LRE1	YCL051W	ABD1	P32783	436 aa	Predicted RBP	2.2	□□□□□ -2.06
LRE1	YCL051W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.2	□□□□□ -2.06	not detected
LRE1	YCL051W	YRF1-2	P40105	1681 aa		2.2	□□□□□ -2.06
LRE1	YCL051W	XBP1	P40489	647 aa		2.2	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms