RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W ETP1P38748 585 aaKnown RBP3.94□□□□□ -1.78
DPB3YBR278W SSZ1P38788 538 aaKnown RBP3.94□□□□□ -1.78
DPB3YBR278W RRP8P38961 392 aaKnown RBP3.94□□□□□ -1.78
DPB3YBR278W UBP5P39944 805 aa3.94□□□□□ -1.78
DPB3YBR278W SSY5P47002 699 aa3.94□□□□□ -1.78
DPB3YBR278W RNR4P49723 345 aaKnown RBP3.94□□□□□ -1.78
DPB3YBR278W SPC105P53148 917 aa3.94□□□□□ -1.78
DPB3YBR278W ATG16Q03818 150 aa3.94□□□□□ -1.78
DPB3YBR278W WHI4Q07655 649 aaKnown RBP3.94□□□□□ -1.78
DPB3YBR278W ADY3Q07732 790 aa3.94□□□□□ -1.78
DPB3YBR278W TPO1Q07824 586 aa3.94□□□□□ -1.78
DPB3YBR278W BUD21Q08492 214 aaPredicted RBP3.94□□□□□ -1.78
DPB3YBR278W GPR1Q12361 961 aa3.94□□□□□ -1.78
DPB3YBR278W GAL1P04385 528 aa3.93□□□□□ -1.78
DPB3YBR278W RPP2AP05319 106 aaKnown RBP3.93□□□□□ -1.78
DPB3YBR278W SWI6P09959 803 aa3.93□□□□□ -1.78
DPB3YBR278W HCA4P20448 770 aaKnown RBP3.93□□□□□ -1.78
DPB3YBR278W RNQ1P25367 405 aa3.93□□□□□ -1.78
DPB3YBR278W SEC65P29478 273 aa3.93□□□□□ -1.78
DPB3YBR278W FAT1P38225 669 aa3.93□□□□□ -1.78
DPB3YBR278W MIP6P38760 659 aaKnown RBP3.93□□□□□ -1.78
DPB3YBR278W IES5P40060 125 aa3.93□□□□□ -1.78
DPB3YBR278W URM1P40554 99 aaPredicted RBP3.93□□□□□ -1.78
DPB3YBR278W BFA1P47113 574 aa3.93□□□□□ -1.78
DPB3YBR278W SLD3P53135 668 aa3.93□□□□□ -1.78
DPB3YBR278W BRE5P53741 515 aaKnown RBP3.93□□□□□ -1.78
DPB3YBR278W ECM38Q05902 660 aaPredicted RBP3.93□□□□□ -1.78
DPB3YBR278W MLC2Q06580 163 aa3.93□□□□□ -1.78
DPB3YBR278W YDL177CQ12257 170 aa3.93□□□□□ -1.78
DPB3YBR278W KCC4P25389 1037 aa3.92□□□□□ -1.78
DPB3YBR278W DPB3P27344 201 aa3.92□□□□□ -1.78
DPB3YBR278W PTP2P29461 750 aa3.92□□□□□ -1.78
DPB3YBR278W SEG2P34250 1132 aa3.92□□□□□ -1.78
DPB3YBR278W LRG1P35688 1017 aa3.92□□□□□ -1.78
DPB3YBR278W YKL133CP36066 463 aa3.92□□□□□ -1.78
DPB3YBR278W YKR075CP36155 307 aa3.92□□□□□ -1.78
DPB3YBR278W BEM4P39011 633 aa3.92□□□□□ -1.78
DPB3YBR278W PFA3P42836 336 aa3.92□□□□□ -1.78
DPB3YBR278W ECL1P48235 211 aa3.92□□□□□ -1.78
DPB3YBR278W MTR3P48240 250 aaPredicted RBP3.92□□□□□ -1.78
DPB3YBR278W TAN1P53072 289 aaPredicted RBP3.92□□□□□ -1.78
DPB3YBR278W GTF1P53260 183 aaPredicted RBP3.92□□□□□ -1.78
DPB3YBR278W ASM4Q05166 528 aa3.92□□□□□ -1.78
DPB3YBR278W UPC2Q12151 913 aa3.92□□□□□ -1.78
DPB3YBR278W TRX2P22803 104 aaKnown RBP3.91□□□□□ -1.78
DPB3YBR278W SED4P25365 1065 aa3.91□□□□□ -1.78
DPB3YBR278W STE14P32584 239 aa3.91□□□□□ -1.78
DPB3YBR278W YKU70P32807 602 aa3.91□□□□□ -1.78
DPB3YBR278W RIM4P38741 713 aa3.91□□□□□ -1.78
DPB3YBR278W SAK1P38990 1142 aa3.91□□□□□ -1.78
DPB3YBR278W MET12P46151 657 aa3.91□□□□□ -1.78
DPB3YBR278W PRP43P53131 767 aaKnown RBP3.91□□□□□ -1.78
DPB3YBR278W ASI2P53895 289 aa3.91□□□□□ -1.78
DPB3YBR278W NOP15P53927 220 aaPredicted RBP3.91□□□□□ -1.78
DPB3YBR278W GPD1Q00055 391 aaKnown RBP3.91□□□□□ -1.78
DPB3YBR278W LEE1Q02799 301 aaKnown RBP3.91□□□□□ -1.78
DPB3YBR278W PLB2Q03674 706 aa3.91□□□□□ -1.78
DPB3YBR278W SGD1Q06132 899 aa3.91□□□□□ -1.78
DPB3YBR278W HMI1Q12039 706 aa3.91□□□□□ -1.78
DPB3YBR278W RRP6Q12149 733 aaKnown RBP3.91□□□□□ -1.78
DPB3YBR278W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
DPB3YBR278W DFG16Q99234 619 aa3.91□□□□□ -1.78
DPB3YBR278W GLN4P13188 809 aaKnown RBP3.9□□□□□ -1.79
DPB3YBR278W ATP12P22135 325 aa3.9□□□□□ -1.79
DPB3YBR278W SIC1P38634 284 aa3.9□□□□□ -1.79
DPB3YBR278W PZF1P39933 429 aa3.9□□□□□ -1.79
DPB3YBR278W VID28P40547 921 aa3.9□□□□□ -1.79
DPB3YBR278W GCV2P49095 1034 aa3.9□□□□□ -1.79
DPB3YBR278W SNO2P53823 222 aa3.9□□□□□ -1.79
DPB3YBR278W ORC4P54791 529 aa3.9□□□□□ -1.79
DPB3YBR278W VPS72Q03388 795 aa3.9□□□□□ -1.79
DPB3YBR278W ROT1Q03691 256 aa3.9□□□□□ -1.79
DPB3YBR278W MUS81Q04149 632 aaPredicted RBP3.9□□□□□ -1.79
DPB3YBR278W ECM16Q04217 1267 aaKnown RBP3.9□□□□□ -1.79
DPB3YBR278W YLR407WQ06070 228 aa3.9□□□□□ -1.79
DPB3YBR278W OMS1Q06668 471 aa3.9□□□□□ -1.79
DPB3YBR278W RPS17AP02407 136 aaKnown RBP3.89□□□□□ -1.79
DPB3YBR278W HIS5P07172 385 aa3.89□□□□□ -1.79
DPB3YBR278W CDC6P09119 513 aa3.89□□□□□ -1.79
DPB3YBR278W TUB3P09734 445 aaKnown RBP3.89□□□□□ -1.79
DPB3YBR278W RPS17BP14127 136 aaKnown RBP3.89□□□□□ -1.79
DPB3YBR278W CDC26P14724 124 aa3.89□□□□□ -1.79
DPB3YBR278W EMC1P25574 760 aa3.89□□□□□ -1.79
DPB3YBR278W IMG2P25642 146 aaPredicted RBP3.89□□□□□ -1.79
DPB3YBR278W SEC21P32074 935 aaKnown RBP3.89□□□□□ -1.79
DPB3YBR278W AKL1P38080 1108 aaKnown RBP3.89□□□□□ -1.79
DPB3YBR278W APN2P38207 520 aa3.89□□□□□ -1.79
DPB3YBR278W YHR202WP38887 602 aa3.89□□□□□ -1.79
DPB3YBR278W SET2P46995 733 aaKnown RBP3.89□□□□□ -1.79
DPB3YBR278W YGR021WP53212 290 aa3.89□□□□□ -1.79
DPB3YBR278W VPS62P53285 467 aa3.89□□□□□ -1.79
DPB3YBR278W CNM67P53865 581 aaKnown RBP3.89□□□□□ -1.79
DPB3YBR278W YDL121CQ07541 149 aa3.89□□□□□ -1.79
DPB3YBR278W YOR352WQ08816 343 aa3.89□□□□□ -1.79
DPB3YBR278W PRP4P20053 465 aaKnown RBP3.88□□□□□ -1.79
DPB3YBR278W HXT4P32467 576 aa3.88□□□□□ -1.79
DPB3YBR278W MRS6P32864 603 aaKnown RBP3.88□□□□□ -1.79
DPB3YBR278W YKL222CP35995 705 aa3.88□□□□□ -1.79
DPB3YBR278W YHL041WP38730 149 aa3.88□□□□□ -1.79
DPB3YBR278W LAM1P38851 1228 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms