RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C YKL222CP35995 705 aa5.16□□□□□ -1.58
SHE3YBR130C ABZ1P37254 787 aaPredicted RBP5.16□□□□□ -1.58
SHE3YBR130C PCL10P53124 433 aa5.16□□□□□ -1.58
SHE3YBR130C DUS1P53759 423 aaKnown RBP5.16□□□□□ -1.58
SHE3YBR130C ORC4P54791 529 aa5.16□□□□□ -1.58
SHE3YBR130C HFI1Q12060 488 aa5.16□□□□□ -1.58
SHE3YBR130C HAL9Q12180 1030 aa5.16□□□□□ -1.58
SHE3YBR130C GAL1P04385 528 aa5.15□□□□□ -1.59
SHE3YBR130C GAS1P22146 559 aaKnown RBP5.15□□□□□ -1.59
SHE3YBR130C KCC4P25389 1037 aa5.15□□□□□ -1.59
SHE3YBR130C RPD3P32561 433 aa5.15□□□□□ -1.59
SHE3YBR130C YKU70P32807 602 aa5.15□□□□□ -1.59
SHE3YBR130C ETP1P38748 585 aaKnown RBP5.15□□□□□ -1.59
SHE3YBR130C MTR3P48240 250 aaPredicted RBP5.15□□□□□ -1.59
SHE3YBR130C HOL1P53389 586 aa5.15□□□□□ -1.59
SHE3YBR130C CDA1Q06702 301 aa5.15□□□□□ -1.59
SHE3YBR130C PSR2Q07949 397 aa5.15□□□□□ -1.59
SHE3YBR130C RIB2Q12362 591 aaKnown RBP5.15□□□□□ -1.59
SHE3YBR130C CMP2P14747 604 aa5.14□□□□□ -1.59
SHE3YBR130C PFK1P16861 987 aaKnown RBP5.14□□□□□ -1.59
SHE3YBR130C PHO81P17442 1178 aa5.14□□□□□ -1.59
SHE3YBR130C SEC65P29478 273 aa5.14□□□□□ -1.59
SHE3YBR130C NGG1P32494 702 aa5.14□□□□□ -1.59
SHE3YBR130C OAF3P36023 863 aa5.14□□□□□ -1.59
SHE3YBR130C SNO2P53823 222 aa5.14□□□□□ -1.59
SHE3YBR130C YDL121CQ07541 149 aa5.14□□□□□ -1.59
SHE3YBR130C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
SHE3YBR130C YLR149CQ99296 730 aa5.14□□□□□ -1.59
SHE3YBR130C CYC1P00044 109 aaPredicted RBP5.13□□□□□ -1.59
SHE3YBR130C SPE1P08432 466 aa5.13□□□□□ -1.59
SHE3YBR130C DAL3P32459 195 aa5.13□□□□□ -1.59
SHE3YBR130C MNN4P36044 1178 aa5.13□□□□□ -1.59
SHE3YBR130C HXT6P39003 570 aaKnown RBP5.13□□□□□ -1.59
SHE3YBR130C HXT7P39004 570 aa5.13□□□□□ -1.59
SHE3YBR130C PZF1P39933 429 aa5.13□□□□□ -1.59
SHE3YBR130C MND2P40577 368 aa5.13□□□□□ -1.59
SHE3YBR130C RSC8P43609 557 aaKnown RBP5.13□□□□□ -1.59
SHE3YBR130C SSY5P47002 699 aa5.13□□□□□ -1.59
SHE3YBR130C YJR039WP47107 1121 aa5.13□□□□□ -1.59
SHE3YBR130C YBP2P53169 641 aa5.13□□□□□ -1.59
SHE3YBR130C SSL1Q04673 461 aaPredicted RBP5.13□□□□□ -1.59
SHE3YBR130C ESC8Q08119 714 aa5.13□□□□□ -1.59
SHE3YBR130C NKP1Q12493 238 aa5.13□□□□□ -1.59
SHE3YBR130C YHR078WP38799 552 aa5.12□□□□□ -1.59
SHE3YBR130C SDP1P40479 209 aa5.12□□□□□ -1.59
SHE3YBR130C ENP2P48234 707 aaKnown RBP5.12□□□□□ -1.59
SHE3YBR130C TMA64Q04600 565 aaKnown RBP5.12□□□□□ -1.59
SHE3YBR130C CDA2Q06703 312 aa5.12□□□□□ -1.59
SHE3YBR130C YDL177CQ12257 170 aa5.12□□□□□ -1.59
SHE3YBR130C Q0142Q9ZZW4 58 aa5.12□□□□□ -1.59
SHE3YBR130C FBP1P09201 348 aa5.11□□□□□ -1.59
SHE3YBR130C SED4P25365 1065 aa5.11□□□□□ -1.59
SHE3YBR130C TSA1P34760 196 aaKnown RBP5.11□□□□□ -1.59
SHE3YBR130C MIP6P38760 659 aaKnown RBP5.11□□□□□ -1.59
SHE3YBR130C SSZ1P38788 538 aaKnown RBP5.11□□□□□ -1.59
SHE3YBR130C CTF8P38877 133 aa5.11□□□□□ -1.59
SHE3YBR130C HIS6P40545 261 aa5.11□□□□□ -1.59
SHE3YBR130C SGD1Q06132 899 aa5.11□□□□□ -1.59
SHE3YBR130C DCS2Q12123 353 aa5.11□□□□□ -1.59
SHE3YBR130C GAL10P04397 699 aa5.1□□□□□ -1.59
SHE3YBR130C PIF1P07271 859 aa5.1□□□□□ -1.59
SHE3YBR130C RPS21AP0C0V8 87 aaKnown RBP5.1□□□□□ -1.59
SHE3YBR130C APN2P38207 520 aa5.1□□□□□ -1.59
SHE3YBR130C SAW1P39735 261 aa5.1□□□□□ -1.59
SHE3YBR130C IES5P40060 125 aa5.1□□□□□ -1.59
SHE3YBR130C VPS27P40343 622 aaKnown RBP5.1□□□□□ -1.59
SHE3YBR130C CNM67P53865 581 aaKnown RBP5.1□□□□□ -1.59
SHE3YBR130C MRPL22P53881 309 aa5.1□□□□□ -1.59
SHE3YBR130C YMR210WQ03649 449 aa5.1□□□□□ -1.59
SHE3YBR130C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SHE3YBR130C RPS21BQ3E754 87 aaKnown RBP5.1□□□□□ -1.59
SHE3YBR130C SWI6P09959 803 aa5.09□□□□□ -1.59
SHE3YBR130C SDS22P36047 338 aa5.09□□□□□ -1.59
SHE3YBR130C APT2P36973 181 aa5.09□□□□□ -1.59
SHE3YBR130C SAK1P38990 1142 aa5.09□□□□□ -1.59
SHE3YBR130C SWM1Q12379 170 aa5.09□□□□□ -1.59
SHE3YBR130C DGR2P32330 852 aa5.08□□□□□ -1.6
SHE3YBR130C SRP68P38687 599 aaKnown RBP5.08□□□□□ -1.6
SHE3YBR130C YHL041WP38730 149 aa5.08□□□□□ -1.6
SHE3YBR130C YHR202WP38887 602 aa5.08□□□□□ -1.6
SHE3YBR130C DUN1P39009 513 aa5.08□□□□□ -1.6
SHE3YBR130C SAP185P40856 1058 aa5.08□□□□□ -1.6
SHE3YBR130C SET2P46995 733 aaKnown RBP5.08□□□□□ -1.6
SHE3YBR130C TPO1Q07824 586 aa5.08□□□□□ -1.6
SHE3YBR130C SSH4P32343 579 aa5.07□□□□□ -1.6
SHE3YBR130C TAF5P38129 798 aa5.07□□□□□ -1.6
SHE3YBR130C LAM1P38851 1228 aa5.07□□□□□ -1.6
SHE3YBR130C RRP8P38961 392 aaKnown RBP5.07□□□□□ -1.6
SHE3YBR130C BEM4P39011 633 aa5.07□□□□□ -1.6
SHE3YBR130C URM1P40554 99 aaPredicted RBP5.07□□□□□ -1.6
SHE3YBR130C MET12P46151 657 aa5.07□□□□□ -1.6
SHE3YBR130C ASK10P48361 1146 aa5.07□□□□□ -1.6
SHE3YBR130C NOP15P53927 220 aaPredicted RBP5.07□□□□□ -1.6
SHE3YBR130C PKH1Q03407 766 aa5.07□□□□□ -1.6
SHE3YBR130C ECM38Q05902 660 aaPredicted RBP5.07□□□□□ -1.6
SHE3YBR130C KCS1Q12494 1050 aa5.07□□□□□ -1.6
SHE3YBR130C PRP6P19735 899 aaPredicted RBP5.06□□□□□ -1.6
SHE3YBR130C HOP1P20050 605 aa5.06□□□□□ -1.6
SHE3YBR130C SER1P33330 395 aaKnown RBP5.06□□□□□ -1.6
SHE3YBR130C AKL1P38080 1108 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms