RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C ERV25P54837 211 aaKnown RBP6.26□□□□□ -1.41
SEC18YBR080C NFI1Q12216 726 aa6.26□□□□□ -1.41
SEC18YBR080C STE13P33894 931 aa6.25□□□□□ -1.41
SEC18YBR080C SHM1P37292 490 aaPredicted RBP6.25□□□□□ -1.41
SEC18YBR080C ENV11P53246 860 aa6.25□□□□□ -1.41
SEC18YBR080C PTA1Q01329 785 aaPredicted RBP6.25□□□□□ -1.41
SEC18YBR080C NSI1Q12457 570 aa6.25□□□□□ -1.41
SEC18YBR080C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
SEC18YBR080C NIP100P33420 868 aa6.25□□□□□ -1.41
SEC18YBR080C YHR202WP38887 602 aa6.25□□□□□ -1.41
SEC18YBR080C PRO2P54885 456 aaKnown RBP6.25□□□□□ -1.41
SEC18YBR080C TY1A-LR4P0C2I8 440 aaKnown RBP6.24□□□□□ -1.41
SEC18YBR080C TY1A-DR6P0CX70 440 aa6.24□□□□□ -1.41
SEC18YBR080C TY1A-ER1P0CX71 440 aa6.24□□□□□ -1.41
SEC18YBR080C TY1A-LR2P0CX72 440 aa6.24□□□□□ -1.41
SEC18YBR080C TY1A-PLP0CX73 440 aa6.24□□□□□ -1.41
SEC18YBR080C TY1A-JR1P0CX74 440 aa6.24□□□□□ -1.41
SEC18YBR080C TY1A-LR3P0CX75 440 aa6.24□□□□□ -1.41
SEC18YBR080C TY1A-ML2P0CX76 440 aa6.24□□□□□ -1.41
SEC18YBR080C ENA1P13587 1091 aa6.24□□□□□ -1.41
SEC18YBR080C APE1P14904 514 aa6.24□□□□□ -1.41
SEC18YBR080C UBC1P21734 215 aaKnown RBP6.24□□□□□ -1.41
SEC18YBR080C SED4P25365 1065 aa6.24□□□□□ -1.41
SEC18YBR080C SGF29P25554 259 aa6.24□□□□□ -1.41
SEC18YBR080C KAP122P32767 1081 aa6.24□□□□□ -1.41
SEC18YBR080C EAF5P39995 279 aa6.24□□□□□ -1.41
SEC18YBR080C CIR1P42940 261 aa6.24□□□□□ -1.41
SEC18YBR080C FYV8P46949 817 aaKnown RBP6.24□□□□□ -1.41
SEC18YBR080C YJR039WP47107 1121 aa6.24□□□□□ -1.41
SEC18YBR080C ENA2Q01896 1091 aa6.24□□□□□ -1.41
SEC18YBR080C TY1A-GR1Q12085 440 aa6.24□□□□□ -1.41
SEC18YBR080C ENA5Q12691 1091 aa6.24□□□□□ -1.41
SEC18YBR080C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.24□□□□□ -1.41
SEC18YBR080C TY1A-OLQ92392 440 aaKnown RBP6.24□□□□□ -1.41
SEC18YBR080C YMR084WA2P2R3 262 aa6.24□□□□□ -1.41
SEC18YBR080C HSL7P38274 827 aa6.24□□□□□ -1.41
SEC18YBR080C HSM3P38348 480 aa6.24□□□□□ -1.41
SEC18YBR080C GND1P38720 489 aaKnown RBP6.24□□□□□ -1.41
SEC18YBR080C VTC4P47075 721 aa6.24□□□□□ -1.41
SEC18YBR080C NOP9P47077 666 aaKnown RBP6.24□□□□□ -1.41
SEC18YBR080C VTC3Q02725 835 aa6.24□□□□□ -1.41
SEC18YBR080C FRK1Q03002 865 aaPredicted RBP6.24□□□□□ -1.41
SEC18YBR080C SPP382Q06411 708 aaPredicted RBP6.24□□□□□ -1.41
SEC18YBR080C ARV1Q06541 321 aa6.24□□□□□ -1.41
SEC18YBR080C PAR32Q12515 295 aaKnown RBP6.24□□□□□ -1.41
SEC18YBR080C DBP2P24783 546 aaKnown RBP6.23□□□□□ -1.41
SEC18YBR080C SLC1P33333 303 aa6.23□□□□□ -1.41
SEC18YBR080C MEF2P39677 819 aa6.23□□□□□ -1.41
SEC18YBR080C ZIP2P53061 704 aa6.23□□□□□ -1.41
SEC18YBR080C SRC1Q03707 834 aa6.23□□□□□ -1.41
SEC18YBR080C LCD1Q04377 747 aa6.23□□□□□ -1.41
SEC18YBR080C CIR2Q08822 631 aa6.23□□□□□ -1.41
SEC18YBR080C YPR015CQ12531 247 aa6.23□□□□□ -1.41
SEC18YBR080C DED1P06634 604 aaKnown RBP6.23□□□□□ -1.41
SEC18YBR080C ADH4P10127 382 aa6.23□□□□□ -1.41
SEC18YBR080C MNE1P24720 663 aa6.23□□□□□ -1.41
SEC18YBR080C APM3P38153 483 aa6.23□□□□□ -1.41
SEC18YBR080C RFC1P38630 861 aaKnown RBP6.23□□□□□ -1.41
SEC18YBR080C CBK1P53894 756 aa6.23□□□□□ -1.41
SEC18YBR080C NUR1Q12066 484 aa6.23□□□□□ -1.41
SEC18YBR080C SES1P07284 462 aaKnown RBP6.22□□□□□ -1.41
SEC18YBR080C SWI6P09959 803 aa6.22□□□□□ -1.41
SEC18YBR080C CDC26P14724 124 aa6.22□□□□□ -1.41
SEC18YBR080C GPI10P30777 616 aa6.22□□□□□ -1.41
SEC18YBR080C MDL1P33310 695 aa6.22□□□□□ -1.41
SEC18YBR080C SET3P36124 751 aa6.22□□□□□ -1.41
SEC18YBR080C VRP1P37370 817 aa6.22□□□□□ -1.41
SEC18YBR080C CTF18P49956 741 aa6.22□□□□□ -1.41
SEC18YBR080C SHE10P53075 577 aa6.22□□□□□ -1.41
SEC18YBR080C YPL107WQ02873 248 aa6.22□□□□□ -1.41
SEC18YBR080C MET7Q08645 548 aa6.22□□□□□ -1.41
SEC18YBR080C DCS2Q12123 353 aa6.22□□□□□ -1.41
SEC18YBR080C RTN2Q12443 393 aa6.22□□□□□ -1.41
SEC18YBR080C LEU2P04173 364 aaPredicted RBP6.22□□□□□ -1.41
SEC18YBR080C FUM1P08417 488 aaKnown RBP6.22□□□□□ -1.41
SEC18YBR080C AAR2P32357 355 aaPredicted RBP6.22□□□□□ -1.41
SEC18YBR080C UIP5P36137 443 aa6.22□□□□□ -1.41
SEC18YBR080C YIL092WP40497 633 aa6.22□□□□□ -1.41
SEC18YBR080C FOL2P51601 243 aaKnown RBP6.22□□□□□ -1.41
SEC18YBR080C YNR068CP53754 272 aa6.22□□□□□ -1.41
SEC18YBR080C SEC5P89102 971 aa6.22□□□□□ -1.41
SEC18YBR080C MRPL13Q02204 264 aa6.22□□□□□ -1.41
SEC18YBR080C JIP4Q03361 876 aa6.22□□□□□ -1.41
SEC18YBR080C EST2Q06163 884 aa6.22□□□□□ -1.41
SEC18YBR080C ENV7Q12003 364 aa6.22□□□□□ -1.41
SEC18YBR080C YOL159C-AQ3E769 90 aa6.22□□□□□ -1.41
SEC18YBR080C ISN1Q99312 450 aa6.22□□□□□ -1.41
SEC18YBR080C STF1P01098 86 aa6.21□□□□□ -1.42
SEC18YBR080C ARG3P05150 338 aa6.21□□□□□ -1.42
SEC18YBR080C PER1P25625 357 aa6.21□□□□□ -1.42
SEC18YBR080C DBF4P32325 704 aa6.21□□□□□ -1.42
SEC18YBR080C PUP2P32379 260 aa6.21□□□□□ -1.42
SEC18YBR080C ATG19P35193 415 aa6.21□□□□□ -1.42
SEC18YBR080C FTH1P38310 465 aa6.21□□□□□ -1.42
SEC18YBR080C SEC28P40509 296 aaKnown RBP6.21□□□□□ -1.42
SEC18YBR080C LYS14P40971 790 aa6.21□□□□□ -1.42
SEC18YBR080C SIP4P46954 829 aa6.21□□□□□ -1.42
SEC18YBR080C UBC9P50623 157 aaPredicted RBP6.21□□□□□ -1.42
SEC18YBR080C SGF73P53165 657 aa6.21□□□□□ -1.42
SEC18YBR080C MDM38Q08179 573 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 88.9 ms