RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 KLK14Q9P0G3 267 aa5.69□□□□□ -1.5
PRPF38B-205ENST00000485810 FRRS1LQ9P0K9 344 aa5.69□□□□□ -1.5
PRPF38B-205ENST00000485810 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
PRPF38B-205ENST00000485810 DLL1O00548 723 aa5.68□□□□□ -1.5
PRPF38B-205ENST00000485810 TXKP42681 527 aa5.68□□□□□ -1.5
PRPF38B-205ENST00000485810 IGF2-ASQ6U949 168 aa5.68□□□□□ -1.5
PRPF38B-205ENST00000485810 PRR23CQ6ZRP0 262 aa5.68□□□□□ -1.5
PRPF38B-205ENST00000485810 DHX32Q7L7V1 743 aaKnown RBP5.68□□□□□ -1.5
PRPF38B-205ENST00000485810 KRT25Q7Z3Z0 450 aa5.68□□□□□ -1.5
PRPF38B-205ENST00000485810 PNMA5Q96PV4 448 aa5.68□□□□□ -1.5
PRPF38B-205ENST00000485810 GOLGA3Q08378 1498 aa5.68□□□□□ -1.5
PRPF38B-205ENST00000485810 FAM196BA6NMK8 535 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 PAX4O43316 350 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 KIF21BO75037 1637 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 SOGA1O94964 1423 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 IDH3AP50213 366 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 HIF1AQ16665 826 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 DZIP1LQ8IYY4 767 aaKnown RBP5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 RGS22Q8NE09 1264 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 USP35Q9P2H5 1018 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 BAZ1BQ9UIG0 1483 aaKnown RBP5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 ARID3CA6NKF2 412 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 OPLAHO14841 1288 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 SASH3O75995 380 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 ALX3O95076 343 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 GPLD1P80108 840 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 TMCO4Q5TGY1 634 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 C1orf115Q9H7X2 142 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 QTRT2Q9H974 415 aaKnown RBP5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 MTMR7Q9Y216 660 aa5.67□□□□□ -1.5
PRPF38B-205ENST00000485810 ATAD2BQ9ULI0 1458 aa5.66□□□□□ -1.5
PRPF38B-205ENST00000485810 CEP164Q9UPV0 1460 aa5.66□□□□□ -1.5
PRPF38B-205ENST00000485810 E9PSI1 815 aa5.66□□□□□ -1.5
PRPF38B-205ENST00000485810 IGFBP4P22692 258 aa5.66□□□□□ -1.5
PRPF38B-205ENST00000485810 MCTP1Q6DN14 999 aa5.66□□□□□ -1.5
PRPF38B-205ENST00000485810 HFE2Q6ZVN8 426 aa5.66□□□□□ -1.5
PRPF38B-205ENST00000485810 WFDC8Q8IUA0 241 aa5.66□□□□□ -1.5
PRPF38B-205ENST00000485810 FAM200AQ8TCP9 573 aa5.66□□□□□ -1.5
PRPF38B-205ENST00000485810 SMG9Q9H0W8 520 aaKnown RBP5.66□□□□□ -1.5
PRPF38B-205ENST00000485810 USP20Q9Y2K6 914 aa5.66□□□□□ -1.5
PRPF38B-205ENST00000485810 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.65□□□□□ -1.51
PRPF38B-205ENST00000485810 COBLO75128 1261 aa5.65□□□□□ -1.51
PRPF38B-205ENST00000485810 MICAL2O94851 1124 aa5.65□□□□□ -1.51
PRPF38B-205ENST00000485810 CLSTN1O94985 981 aa5.65□□□□□ -1.51
PRPF38B-205ENST00000485810 MED26O95402 600 aa5.65□□□□□ -1.51
PRPF38B-205ENST00000485810 YBX3P16989 372 aaKnown RBP eCLIP5.65□□□□□ -1.511e-6■■■■□ 22.5
PRPF38B-205ENST00000485810 ELMSAN1Q6PJG2 1045 aa5.65□□□□□ -1.51
PRPF38B-205ENST00000485810 PRIMPOLQ96LW4 560 aa5.65□□□□□ -1.51
PRPF38B-205ENST00000485810 NOVA2Q9UNW9 492 aaKnown RBP5.65□□□□□ -1.51
PRPF38B-205ENST00000485810 F8W735 103 aaPredicted RBP5.64□□□□□ -1.51
PRPF38B-205ENST00000485810 FSTP19883 344 aa5.64□□□□□ -1.51
PRPF38B-205ENST00000485810 DGKZQ13574 1117 aa5.64□□□□□ -1.51
PRPF38B-205ENST00000485810 PCSK7Q16549 785 aa5.64□□□□□ -1.51
PRPF38B-205ENST00000485810 COL17A1Q9UMD9 1497 aaPredicted RBP5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 J3QW42 95 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 PRMT3O60678 531 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 EGFRP00533 1210 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 WEE1P30291 646 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 ARSDP51689 593 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 NRLP54845 237 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 Q6ZS46 218 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 TMEM130Q8N3G9 435 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 STK32AQ8WU08 396 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 PKNOX2Q96KN3 472 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 PSMD1Q99460 953 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 AKTIPQ9H8T0 292 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 C11orf16Q9NQ32 467 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 TLR7Q9NYK1 1049 aaKnown RBP5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 LRFN2Q9ULH4 789 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 RUSC2Q8N2Y8 1516 aa5.63□□□□□ -1.51
PRPF38B-205ENST00000485810 SYNJ1O43426 1573 aa5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 ARID4BQ4LE39 1312 aaPredicted RBP5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 RARAP10276 462 aa5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 SSTR4P31391 388 aa5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 CD97P48960 835 aa5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 SETDB1Q15047 1291 aa5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 TICAM2Q86XR7 235 aa5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 AEBP1Q8IUX7 1158 aa5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 MYO19Q96H55 970 aa5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 TRAIPQ9BWF2 469 aa5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 ZMIZ1Q9ULJ6 1067 aa5.62□□□□□ -1.51
PRPF38B-205ENST00000485810 TM4SF5O14894 197 aa5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 EPB42P16452 691 aa5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 MFAP1P55081 439 aaKnown RBP5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 SRPK2P78362 688 aaKnown RBP5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 C11orf91Q3C1V1 193 aa5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 CAPN12Q6ZSI9 719 aa5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 FOXD4L4Q8WXT5 416 aaPredicted RBP5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 PLD4Q96BZ4 506 aa5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 UBL7Q96S82 380 aaPredicted RBP5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 RTCBQ9Y3I0 505 aaKnown RBP5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 KCNMB2Q9Y691 235 aa5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 TOP2BQ02880 1626 aa5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 VPS8Q8N3P4 1428 aa5.61□□□□□ -1.51
PRPF38B-205ENST00000485810 NCAPD3P42695 1498 aa5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 LOC102724428A0A0B4J2F2 783 aa5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 PPM1GO15355 546 aaPredicted RBP5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 MMP20O60882 483 aa5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 ADAMTS4O75173 837 aa5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 SIK1P57059 783 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms