RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 TXNDC2Q86VQ3 553 aa7.19□□□□□ -1.26
SMC4-208ENST00000467468 NUDT8Q8WV74 236 aa7.19□□□□□ -1.26
SMC4-208ENST00000467468 DCAF5Q96JK2 942 aa7.19□□□□□ -1.26
SMC4-208ENST00000467468 NSUN5Q96P11 429 aaKnown RBP7.19□□□□□ -1.26
SMC4-208ENST00000467468 PLVAPQ9BX97 442 aa7.19□□□□□ -1.26
SMC4-208ENST00000467468 ELP3Q9H9T3 547 aa7.19□□□□□ -1.26
SMC4-208ENST00000467468 POLIQ9UNA4 740 aa7.19□□□□□ -1.26
SMC4-208ENST00000467468 LOC102724428A0A0B4J2F2 783 aa7.18□□□□□ -1.26
SMC4-208ENST00000467468 ZBTB42B2RXF5 422 aa7.18□□□□□ -1.26
SMC4-208ENST00000467468 SIK1P57059 783 aa7.18□□□□□ -1.26
SMC4-208ENST00000467468 KCNA1Q09470 495 aa7.18□□□□□ -1.26
SMC4-208ENST00000467468 PERM1Q5SV97 790 aa7.18□□□□□ -1.26
SMC4-208ENST00000467468 TTC9Q92623 222 aa7.18□□□□□ -1.26
SMC4-208ENST00000467468 TRIM11Q96F44 468 aa7.18□□□□□ -1.26
SMC4-208ENST00000467468 GZF1Q9H116 711 aaPredicted RBP7.18□□□□□ -1.26
SMC4-208ENST00000467468 SUV39H2Q9H5I1 410 aa7.18□□□□□ -1.26
SMC4-208ENST00000467468 NDUFB5O43674 189 aa7.17□□□□□ -1.26
SMC4-208ENST00000467468 SPATA31C1P0DKV0 1188 aa7.17□□□□□ -1.26
SMC4-208ENST00000467468 NID1P14543 1247 aa7.17□□□□□ -1.26
SMC4-208ENST00000467468 RAC1P63000 192 aa7.17□□□□□ -1.26
SMC4-208ENST00000467468 TRAPPC3LQ5T215 181 aa7.17□□□□□ -1.26
SMC4-208ENST00000467468 XKR5Q6UX68 686 aa7.17□□□□□ -1.26
SMC4-208ENST00000467468 HFE2Q6ZVN8 426 aa7.17□□□□□ -1.26
SMC4-208ENST00000467468 PMEPA1Q969W9 287 aa7.17□□□□□ -1.26
SMC4-208ENST00000467468 LPIN3Q9BQK8 851 aa7.17□□□□□ -1.26
SMC4-208ENST00000467468 SMG9Q9H0W8 520 aaKnown RBP7.17□□□□□ -1.26
SMC4-208ENST00000467468 BRPF3Q9ULD4 1205 aa7.17□□□□□ -1.26
SMC4-208ENST00000467468 COL8A1P27658 744 aa7.16□□□□□ -1.26
SMC4-208ENST00000467468 AFF1P51825 1210 aaKnown RBP7.16□□□□□ -1.26
SMC4-208ENST00000467468 TRIM28Q13263 835 aaKnown RBP7.16□□□□□ -1.26
SMC4-208ENST00000467468 C8orf86Q6ZUL3 223 aa7.16□□□□□ -1.26
SMC4-208ENST00000467468 PLD4Q96BZ4 506 aa7.16□□□□□ -1.26
SMC4-208ENST00000467468 TMEM63CQ9P1W3 806 aa7.16□□□□□ -1.26
SMC4-208ENST00000467468 GNEQ9Y223 722 aaKnown RBP7.16□□□□□ -1.26
SMC4-208ENST00000467468 FZD6O60353 706 aa7.15□□□□□ -1.26
SMC4-208ENST00000467468 NCAPG2Q86XI2 1143 aa7.15□□□□□ -1.26
SMC4-208ENST00000467468 WFDC8Q8IUA0 241 aa7.15□□□□□ -1.26
SMC4-208ENST00000467468 CACTIN-AS1Q8N1I8 211 aa7.15□□□□□ -1.26
SMC4-208ENST00000467468 RGS22Q8NE09 1264 aa7.15□□□□□ -1.26
SMC4-208ENST00000467468 SNX29Q8TEQ0 813 aa7.15□□□□□ -1.26
SMC4-208ENST00000467468 J3QW42 95 aa7.14□□□□□ -1.27
SMC4-208ENST00000467468 SMNDC1O75940 238 aaKnown RBP eCLIP7.14□□□□□ -1.272e-16■■■■■ 67.6
SMC4-208ENST00000467468 APBA3O96018 575 aa7.14□□□□□ -1.27
SMC4-208ENST00000467468 IGHA1P01876 353 aa7.14□□□□□ -1.27
SMC4-208ENST00000467468 CES1P23141 567 aa7.14□□□□□ -1.27
SMC4-208ENST00000467468 MFAP1P55081 439 aaKnown RBP7.14□□□□□ -1.27
SMC4-208ENST00000467468 PDE3BQ13370 1112 aa7.14□□□□□ -1.27
SMC4-208ENST00000467468 COL9A3Q14050 684 aaPredicted RBP7.14□□□□□ -1.27
SMC4-208ENST00000467468 GJD3Q8N144 294 aa7.14□□□□□ -1.27
SMC4-208ENST00000467468 NACC1Q96RE7 527 aa7.14□□□□□ -1.27
SMC4-208ENST00000467468 GGNBP2Q9H3C7 697 aa7.14□□□□□ -1.27
SMC4-208ENST00000467468 CCDC87Q9NVE4 849 aa7.14□□□□□ -1.27
SMC4-208ENST00000467468 FAM177BA6PVY3 158 aa7.13□□□□□ -1.27
SMC4-208ENST00000467468 PHACTR2O75167 634 aa7.13□□□□□ -1.27
SMC4-208ENST00000467468 KIF4AO95239 1232 aa7.13□□□□□ -1.27
SMC4-208ENST00000467468 NEFLP07196 543 aa7.13□□□□□ -1.27
SMC4-208ENST00000467468 MSL1Q68DK7 614 aa7.13□□□□□ -1.27
SMC4-208ENST00000467468 DTWD1Q8N5C7 304 aa7.13□□□□□ -1.27
SMC4-208ENST00000467468 DCAF11Q8TEB1 546 aa7.13□□□□□ -1.27
SMC4-208ENST00000467468 CITED4Q96RK1 184 aa7.13□□□□□ -1.27
SMC4-208ENST00000467468 A6NHS1 94 aa7.12□□□□□ -1.27
SMC4-208ENST00000467468 SOWAHDA6NJG2 315 aa7.12□□□□□ -1.27
SMC4-208ENST00000467468 PLA2G4EQ3MJ16 856 aa7.12□□□□□ -1.27
SMC4-208ENST00000467468 MUC3BQ9H195 1237 aa7.12□□□□□ -1.27
SMC4-208ENST00000467468 BIN2Q9UBW5 565 aaPredicted RBP7.12□□□□□ -1.27
SMC4-208ENST00000467468 A0A0A0MRY4 1105 aa7.11□□□□□ -1.27
SMC4-208ENST00000467468 KRBA1A5PL33 1030 aa7.11□□□□□ -1.27
SMC4-208ENST00000467468 TNFRSF21O75509 655 aa7.11□□□□□ -1.27
SMC4-208ENST00000467468 CYP2E1P05181 493 aaPredicted RBP7.11□□□□□ -1.27
SMC4-208ENST00000467468 EDN3P14138 238 aa7.11□□□□□ -1.27
SMC4-208ENST00000467468 ELNP15502 786 aa7.11□□□□□ -1.27
SMC4-208ENST00000467468 ARHGAP4P98171 946 aa7.11□□□□□ -1.27
SMC4-208ENST00000467468 GDF6Q6KF10 455 aaPredicted RBP7.11□□□□□ -1.27
SMC4-208ENST00000467468 GPAT2Q6NUI2 795 aa7.11□□□□□ -1.27
SMC4-208ENST00000467468 DMRTC2Q8IXT2 367 aaPredicted RBP7.11□□□□□ -1.27
SMC4-208ENST00000467468 C1orf127Q8N9H9 656 aa7.11□□□□□ -1.27
SMC4-208ENST00000467468 SRA1Q9HD15 236 aaKnown RBP7.11□□□□□ -1.27
SMC4-208ENST00000467468 CNTN3Q9P232 1028 aa7.11□□□□□ -1.27
SMC4-208ENST00000467468 KANSL3Q9P2N6 904 aa7.11□□□□□ -1.27
SMC4-208ENST00000467468 GRIK5Q16478 980 aa7.1□□□□□ -1.27
SMC4-208ENST00000467468 COL13A1Q5TAT6 717 aaPredicted RBP7.1□□□□□ -1.27
SMC4-208ENST00000467468 CEP135Q66GS9 1140 aa7.1□□□□□ -1.27
SMC4-208ENST00000467468 FMR1NBQ8N0W7 255 aaPredicted RBP7.1□□□□□ -1.27
SMC4-208ENST00000467468 TMC1Q8TDI8 760 aa7.1□□□□□ -1.27
SMC4-208ENST00000467468 PBX4Q9BYU1 374 aa7.1□□□□□ -1.27
SMC4-208ENST00000467468 FAM229AH3BQW9 127 aa7.09□□□□□ -1.27
SMC4-208ENST00000467468 MSTNO14793 375 aa7.09□□□□□ -1.27
SMC4-208ENST00000467468 PTPRAP18433 802 aa7.09□□□□□ -1.27
SMC4-208ENST00000467468 ATP11AP98196 1134 aa7.09□□□□□ -1.27
SMC4-208ENST00000467468 MAP4K3Q8IVH8 894 aa7.09□□□□□ -1.27
SMC4-208ENST00000467468 CEP120Q8N960 986 aa7.09□□□□□ -1.27
SMC4-208ENST00000467468 RASSF4Q9H2L5 321 aa7.09□□□□□ -1.27
SMC4-208ENST00000467468 SALL4Q9UJQ4 1053 aa7.09□□□□□ -1.27
SMC4-208ENST00000467468 AMOTL2Q9Y2J4 779 aa7.09□□□□□ -1.27
SMC4-208ENST00000467468 ECM1Q16610 540 aa7.08□□□□□ -1.28
SMC4-208ENST00000467468 IL22RA1Q8N6P7 574 aa7.08□□□□□ -1.28
SMC4-208ENST00000467468 CHRDQ9H2X0 955 aa7.08□□□□□ -1.28
SMC4-208ENST00000467468 FOXD3Q9UJU5 478 aaPredicted RBP7.08□□□□□ -1.28
SMC4-208ENST00000467468 TRIM33Q9UPN9 1127 aa7.08□□□□□ -1.28
SMC4-208ENST00000467468 IVNS1ABPQ9Y6Y0 642 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms