RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 FAM26DQ5JW98 314 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 PHACTR1Q9C0D0 580 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 ZNF232Q9UNY5 417 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 HCN4Q9Y3Q4 1203 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 IFT172Q9UG01 1749 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 ADGRB3O60242 1522 aa7.01□□□□□ -1.29
SF3A3-202ENST00000460925 ZNF142P52746 1687 aaPredicted RBP7□□□□□ -1.29
SF3A3-202ENST00000460925 MZF1P28698 734 aaPredicted RBP7□□□□□ -1.29
SF3A3-202ENST00000460925 GTF2E1P29083 439 aaPredicted RBP7□□□□□ -1.29
SF3A3-202ENST00000460925 USP5P45974 858 aa7□□□□□ -1.29
SF3A3-202ENST00000460925 RELBQ01201 579 aa7□□□□□ -1.29
SF3A3-202ENST00000460925 TAGLNQ01995 201 aaKnown RBP7□□□□□ -1.29
SF3A3-202ENST00000460925 DGKZQ13574 1117 aa7□□□□□ -1.29
SF3A3-202ENST00000460925 ETFBKMTQ8IXQ9 262 aa7□□□□□ -1.29
SF3A3-202ENST00000460925 GJD3Q8N144 294 aa7□□□□□ -1.29
SF3A3-202ENST00000460925 C7orf43Q8WVR3 580 aa7□□□□□ -1.29
SF3A3-202ENST00000460925 NGLY1Q96IV0 654 aa7□□□□□ -1.29
SF3A3-202ENST00000460925 TSEN34Q9BSV6 310 aaKnown RBP7□□□□□ -1.29
SF3A3-202ENST00000460925 PLA2G2EQ9NZK7 142 aa7□□□□□ -1.29
SF3A3-202ENST00000460925 GPC6Q9Y625 555 aaPredicted RBP7□□□□□ -1.29
SF3A3-202ENST00000460925 TMEM131LA2VDJ0 1609 aa7□□□□□ -1.29
SF3A3-202ENST00000460925 CCDC144AA2RUR9 1427 aa7□□□□□ -1.29
SF3A3-202ENST00000460925 CEP170BQ9Y4F5 1589 aaPredicted RBP6.99□□□□□ -1.29
SF3A3-202ENST00000460925 SPATA31C2B4DYI2 1134 aa6.99□□□□□ -1.29
SF3A3-202ENST00000460925 SPINT1O43278 529 aa6.99□□□□□ -1.29
SF3A3-202ENST00000460925 PLCB3Q01970 1234 aa6.99□□□□□ -1.29
SF3A3-202ENST00000460925 GNASQ5JWF2 1037 aa6.99□□□□□ -1.29
SF3A3-202ENST00000460925 TMEM214Q6NUQ4 689 aaKnown RBP6.99□□□□□ -1.29
SF3A3-202ENST00000460925 IFT43Q96FT9 208 aa6.99□□□□□ -1.29
SF3A3-202ENST00000460925 ZNF395Q9H8N7 513 aaPredicted RBP6.99□□□□□ -1.29
SF3A3-202ENST00000460925 ZDHHC3Q9NYG2 299 aa6.99□□□□□ -1.29
SF3A3-202ENST00000460925 PPLO60437 1756 aa6.99□□□□□ -1.29
SF3A3-202ENST00000460925 GPR182O15218 404 aa6.98□□□□□ -1.29
SF3A3-202ENST00000460925 TCF3P15923 654 aa6.98□□□□□ -1.29
SF3A3-202ENST00000460925 EHHADHQ08426 723 aa6.98□□□□□ -1.29
SF3A3-202ENST00000460925 AAMPQ13685 434 aa6.98□□□□□ -1.29
SF3A3-202ENST00000460925 HIF1AQ16665 826 aa6.98□□□□□ -1.29
SF3A3-202ENST00000460925 TRIM67Q6ZTA4 783 aa6.98□□□□□ -1.29
SF3A3-202ENST00000460925 PARP3Q9Y6F1 533 aa6.98□□□□□ -1.29
SF3A3-202ENST00000460925 SETD1BQ9UPS6 1966 aaKnown RBP6.98□□□□□ -1.29
SF3A3-202ENST00000460925 NEXMIFQ5QGS0 1516 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 PRPF40AO75400 957 aaKnown RBP6.97□□□□□ -1.29
SF3A3-202ENST00000460925 RECKO95980 971 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 PDGFAP04085 211 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 ZAP70P43403 619 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 IDI1Q13907 227 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 MRPL58Q14197 206 aaKnown RBP6.97□□□□□ -1.29
SF3A3-202ENST00000460925 RGL3Q3MIN7 710 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 C4orf17Q53FE4 359 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 WDR44Q5JSH3 913 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 SPATA31E1Q6ZUB1 1445 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 ATCAYQ86WG3 371 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 TMC1Q8TDI8 760 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 CHMP4AQ9BY43 222 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 KLK14Q9P0G3 267 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 POLIQ9UNA4 740 aa6.97□□□□□ -1.29
SF3A3-202ENST00000460925 TNFRSF10AO00220 468 aa6.96□□□□□ -1.3
SF3A3-202ENST00000460925 TXLNAP40222 546 aa6.96□□□□□ -1.3
SF3A3-202ENST00000460925 SLC27A3Q5K4L6 730 aa6.96□□□□□ -1.3
SF3A3-202ENST00000460925 IER5Q5VY09 327 aa6.96□□□□□ -1.3
SF3A3-202ENST00000460925 HPS1Q92902 700 aa6.96□□□□□ -1.3
SF3A3-202ENST00000460925 PKNOX2Q96KN3 472 aa6.96□□□□□ -1.3
SF3A3-202ENST00000460925 FAM13BQ9NYF5 915 aa6.96□□□□□ -1.3
SF3A3-202ENST00000460925 BCS1LQ9Y276 419 aa6.96□□□□□ -1.3
SF3A3-202ENST00000460925 A2ML1A8K2U0 1454 aa6.96□□□□□ -1.3
SF3A3-202ENST00000460925 IQGAP1P46940 1657 aa6.96□□□□□ -1.3
SF3A3-202ENST00000460925 POLR1AO95602 1720 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-202ENST00000460925 TGFBR3LH3BV60 316 aa6.95□□□□□ -1.3
SF3A3-202ENST00000460925 RPLP1P05386 114 aaKnown RBP6.95□□□□□ -1.3
SF3A3-202ENST00000460925 LDHBP07195 334 aaKnown RBP6.95□□□□□ -1.3
SF3A3-202ENST00000460925 ENOX2Q16206 610 aaKnown RBP6.95□□□□□ -1.3
SF3A3-202ENST00000460925 NBPF1Q3BBV0 1214 aa6.95□□□□□ -1.3
SF3A3-202ENST00000460925 TREML1Q86YW5 311 aa6.95□□□□□ -1.3
SF3A3-202ENST00000460925 LINC00528Q8N1L1 170 aa6.95□□□□□ -1.3
SF3A3-202ENST00000460925 INSM2Q96T92 566 aaPredicted RBP6.95□□□□□ -1.3
SF3A3-202ENST00000460925 NLRP1Q9C000 1473 aa6.95□□□□□ -1.3
SF3A3-202ENST00000460925 UHRF1BP1Q6BDS2 1440 aa6.94□□□□□ -1.3
SF3A3-202ENST00000460925 KDM5AP29375 1690 aaKnown RBP6.94□□□□□ -1.3
SF3A3-202ENST00000460925 LMTK3Q96Q04 1460 aa6.94□□□□□ -1.3
SF3A3-202ENST00000460925 PCSK2P16519 638 aa6.94□□□□□ -1.3
SF3A3-202ENST00000460925 PLA2G4AP47712 749 aa6.94□□□□□ -1.3
SF3A3-202ENST00000460925 DNM1Q05193 864 aaKnown RBP6.94□□□□□ -1.3
SF3A3-202ENST00000460925 RHPN1Q8TCX5 695 aa6.94□□□□□ -1.3
SF3A3-202ENST00000460925 EDEM1Q92611 657 aa6.94□□□□□ -1.3
SF3A3-202ENST00000460925 DMGDHQ9UI17 866 aaKnown RBP6.94□□□□□ -1.3
SF3A3-202ENST00000460925 TONSLQ96HA7 1378 aa6.94□□□□□ -1.3
SF3A3-202ENST00000460925 NRXN3Q9Y4C0 1643 aa6.94□□□□□ -1.3
SF3A3-202ENST00000460925 SETD1AO15047 1707 aaKnown RBP6.93□□□□□ -1.3
SF3A3-202ENST00000460925 CAPN5O15484 640 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-202ENST00000460925 MICAL2O94851 1124 aa6.93□□□□□ -1.3
SF3A3-202ENST00000460925 UPP2O95045 317 aa6.93□□□□□ -1.3
SF3A3-202ENST00000460925 MAPK8P45983 427 aa6.93□□□□□ -1.3
SF3A3-202ENST00000460925 HSPA2P54652 639 aa6.93□□□□□ -1.3
SF3A3-202ENST00000460925 TMC4Q7Z404 712 aa6.93□□□□□ -1.3
SF3A3-202ENST00000460925 NIF3L1Q9GZT8 377 aa6.93□□□□□ -1.3
SF3A3-202ENST00000460925 NEURL4Q96JN8 1562 aa6.93□□□□□ -1.3
SF3A3-202ENST00000460925 CLSPNQ9HAW4 1339 aa6.93□□□□□ -1.3
SF3A3-202ENST00000460925 ZFYVE9O95405 1425 aa6.93□□□□□ -1.3
SF3A3-202ENST00000460925 RIMS2Q9UQ26 1411 aa6.93□□□□□ -1.3
SF3A3-202ENST00000460925 STRCQ7RTU9 1775 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms