RNA–Protein interactions for RNA: ENST00000439255.1

RPL35A-203, Transcript of ribosomal protein L35a, humanhuman

TSL 5

Gene RPL35A, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-203ENST00000439255 NXF1Q9UBU9 619 aaKnown RBP8□□□□□ -1.13
RPL35A-203ENST00000439255 RIMBP3CA6NJZ7 1639 aa8□□□□□ -1.13
RPL35A-203ENST00000439255 RIMBP3BA6NNM3 1639 aa8□□□□□ -1.13
RPL35A-203ENST00000439255 RIMBP3Q9UFD9 1639 aa8□□□□□ -1.13
RPL35A-203ENST00000439255 KIF20BQ96Q89 1820 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 SKIP12755 728 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 GNAI1P63096 354 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 HDAC1Q13547 482 aaPredicted RBP7.99□□□□□ -1.13
RPL35A-203ENST00000439255 NFE2L2Q16236 605 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 CDC42BPGQ6DT37 1551 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 PPIP5K1Q6PFW1 1433 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 CYP2U1Q7Z449 544 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 SSH1Q8WYL5 1049 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 POLKQ9UBT6 870 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 NOB1Q9ULX3 412 aaKnown RBP7.99□□□□□ -1.13
RPL35A-203ENST00000439255 TNNQ9UQP3 1299 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 HRH3Q9Y5N1 445 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 ERBB4Q15303 1308 aa7.99□□□□□ -1.13
RPL35A-203ENST00000439255 FAM135BQ49AJ0 1406 aa7.98□□□□□ -1.13
RPL35A-203ENST00000439255 TRIM27P14373 513 aa7.98□□□□□ -1.13
RPL35A-203ENST00000439255 SCNN1DP51172 638 aa7.98□□□□□ -1.13
RPL35A-203ENST00000439255 PTSQ03393 145 aa7.98□□□□□ -1.13
RPL35A-203ENST00000439255 CLN3Q13286 438 aa7.98□□□□□ -1.13
RPL35A-203ENST00000439255 NUDT16Q96DE0 195 aaKnown RBP7.98□□□□□ -1.13
RPL35A-203ENST00000439255 ETNK1Q9HBU6 452 aa7.98□□□□□ -1.13
RPL35A-203ENST00000439255 AATKQ6ZMQ8 1374 aa7.97□□□□□ -1.13
RPL35A-203ENST00000439255 TNRQ92752 1358 aa7.97□□□□□ -1.13
RPL35A-203ENST00000439255 USP17L5A8MUK1 530 aa7.97□□□□□ -1.13
RPL35A-203ENST00000439255 H3BM21 787 aa7.97□□□□□ -1.13
RPL35A-203ENST00000439255 WFS1O76024 890 aa7.97□□□□□ -1.13
RPL35A-203ENST00000439255 MYCP01106 439 aaPredicted RBP7.97□□□□□ -1.13
RPL35A-203ENST00000439255 RHOQP17081 205 aa7.97□□□□□ -1.13
RPL35A-203ENST00000439255 RNF144AP50876 292 aaPredicted RBP7.97□□□□□ -1.13
RPL35A-203ENST00000439255 NCOA4Q13772 614 aa7.97□□□□□ -1.13
RPL35A-203ENST00000439255 NFKBIBQ15653 356 aa7.97□□□□□ -1.13
RPL35A-203ENST00000439255 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.97□□□□□ -1.13
RPL35A-203ENST00000439255 TXNDC2Q86VQ3 553 aa7.97□□□□□ -1.13
RPL35A-203ENST00000439255 IFT57Q9NWB7 429 aa7.97□□□□□ -1.13
RPL35A-203ENST00000439255 CDK12Q9NYV4 1490 aaPredicted RBP7.97□□□□□ -1.13
RPL35A-203ENST00000439255 CPSF1Q10570 1443 aaKnown RBP7.96□□□□□ -1.13
RPL35A-203ENST00000439255 PPFIA3O75145 1194 aa7.96□□□□□ -1.14
RPL35A-203ENST00000439255 HMOX1P09601 288 aa7.96□□□□□ -1.14
RPL35A-203ENST00000439255 MAP7D1Q3KQU3 841 aa7.96□□□□□ -1.14
RPL35A-203ENST00000439255 PRICKLE2Q7Z3G6 844 aa7.96□□□□□ -1.14
RPL35A-203ENST00000439255 NME9Q86XW9 330 aa7.96□□□□□ -1.14
RPL35A-203ENST00000439255 TMEM57Q8N5G2 664 aa7.96□□□□□ -1.14
RPL35A-203ENST00000439255 ARHGAP45Q92619 1136 aa7.96□□□□□ -1.14
RPL35A-203ENST00000439255 PCDHGA11Q9Y5H2 935 aa7.96□□□□□ -1.14
RPL35A-203ENST00000439255 LRRC7Q96NW7 1537 aa7.96□□□□□ -1.14
RPL35A-203ENST00000439255 TSPOAP1O95153 1857 aa7.96□□□□□ -1.14
RPL35A-203ENST00000439255 SLC35F4A4IF30 521 aa7.95□□□□□ -1.14
RPL35A-203ENST00000439255 EIF5BO60841 1220 aaKnown RBP7.95□□□□□ -1.14
RPL35A-203ENST00000439255 GNRH1P01148 92 aa7.95□□□□□ -1.14
RPL35A-203ENST00000439255 IL13P35225 146 aa7.95□□□□□ -1.14
RPL35A-203ENST00000439255 USP4Q13107 963 aa7.95□□□□□ -1.14
RPL35A-203ENST00000439255 CNKSR1Q969H4 720 aa7.95□□□□□ -1.14
RPL35A-203ENST00000439255 API5Q9BZZ5 524 aaKnown RBP7.95□□□□□ -1.14
RPL35A-203ENST00000439255 METP08581 1390 aa7.95□□□□□ -1.14
RPL35A-203ENST00000439255 TECPR2O15040 1411 aa7.95□□□□□ -1.14
RPL35A-203ENST00000439255 VIRMAQ69YN4 1812 aaKnown RBP7.94□□□□□ -1.14
RPL35A-203ENST00000439255 SMC5Q8IY18 1101 aa7.94□□□□□ -1.14
RPL35A-203ENST00000439255 CCDC155Q8N6L0 562 aa7.94□□□□□ -1.14
RPL35A-203ENST00000439255 NFATC2IPQ8NCF5 419 aa7.94□□□□□ -1.14
RPL35A-203ENST00000439255 XAGE2Q96GT9 111 aa7.94□□□□□ -1.14
RPL35A-203ENST00000439255 TBC1D32Q96NH3 1257 aa7.94□□□□□ -1.14
RPL35A-203ENST00000439255 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
RPL35A-203ENST00000439255 GRIP2Q9C0E4 1043 aa7.94□□□□□ -1.14
RPL35A-203ENST00000439255 ZBTB40Q9NUA8 1239 aa7.94□□□□□ -1.14
RPL35A-203ENST00000439255 CUEDC1Q9NWM3 386 aaPredicted RBP7.94□□□□□ -1.14
RPL35A-203ENST00000439255 KIAA1024Q9UPX6 916 aa7.94□□□□□ -1.14
RPL35A-203ENST00000439255 KNDC1Q76NI1 1749 aa7.94□□□□□ -1.14
RPL35A-203ENST00000439255 TMEM2Q9UHN6 1383 aa7.94□□□□□ -1.14
RPL35A-203ENST00000439255 CPS1P31327 1500 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 SETD1AO15047 1707 aaKnown RBP7.93□□□□□ -1.14
RPL35A-203ENST00000439255 USP17L3A6NCW0 530 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 USP17L4A6NCW7 530 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 TMEM229AB2RXF0 380 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 CENPCQ03188 943 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 POU4F2Q12837 409 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 USP17L2Q6R6M4 530 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 USP17L1Q7RTZ2 530 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 LYSMD3Q7Z3D4 306 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 GCC1Q96CN9 775 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 ESYT1Q9BSJ8 1104 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 EID1Q9Y6B2 187 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 USP19O94966 1318 aa7.93□□□□□ -1.14
RPL35A-203ENST00000439255 ATP9BO43861 1147 aa7.92□□□□□ -1.14
RPL35A-203ENST00000439255 VAMP4O75379 141 aa7.92□□□□□ -1.14
RPL35A-203ENST00000439255 GPC1P35052 558 aa7.92□□□□□ -1.14
RPL35A-203ENST00000439255 GDF10P55107 478 aa7.92□□□□□ -1.14
RPL35A-203ENST00000439255 NUCB1Q02818 461 aa7.92□□□□□ -1.14
RPL35A-203ENST00000439255 TWISTNBQ3B726 338 aaPredicted RBP7.92□□□□□ -1.14
RPL35A-203ENST00000439255 PHACTR3Q96KR7 559 aa7.92□□□□□ -1.14
RPL35A-203ENST00000439255 NLRP3Q96P20 1036 aa7.92□□□□□ -1.14
RPL35A-203ENST00000439255 TFIP11Q9UBB9 837 aaKnown RBP7.92□□□□□ -1.14
RPL35A-203ENST00000439255 USP3Q9Y6I4 520 aa7.92□□□□□ -1.14
RPL35A-203ENST00000439255 NRXN3Q9Y4C0 1643 aa7.92□□□□□ -1.14
RPL35A-203ENST00000439255 ZNF853P0CG23 659 aa7.91□□□□□ -1.14
RPL35A-203ENST00000439255 FBLN1P23142 703 aa7.91□□□□□ -1.14
RPL35A-203ENST00000439255 GMPRP36959 345 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms