RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 CNGB1Q14028 1251 aaPredicted RBP15.28■□□□□ 0.04
DDX39B-209ENST00000428450 KDM3BQ7LBC6 1761 aa15.28■□□□□ 0.04
DDX39B-209ENST00000428450 C6orf229H3BNL8 230 aa15.27■□□□□ 0.04
DDX39B-209ENST00000428450 GPSM2P81274 684 aa15.27■□□□□ 0.04
DDX39B-209ENST00000428450 INTS3Q68E01 1043 aaKnown RBP15.27■□□□□ 0.04
DDX39B-209ENST00000428450 CELF1Q92879 486 aaKnown RBP15.27■□□□□ 0.04
DDX39B-209ENST00000428450 COLQQ9Y215 455 aaPredicted RBP15.27■□□□□ 0.04
DDX39B-209ENST00000428450 SCN9AQ15858 1988 aa15.27■□□□□ 0.03
DDX39B-209ENST00000428450 TRIOBPQ9H2D6 2365 aa15.26■□□□□ 0.03
DDX39B-209ENST00000428450 PROSER3Q2NL68 480 aa15.26■□□□□ 0.03
DDX39B-209ENST00000428450 TRMT112Q9UI30 125 aaKnown RBP15.26■□□□□ 0.03
DDX39B-209ENST00000428450 SCAF8Q9UPN6 1271 aaKnown RBP15.26■□□□□ 0.03
DDX39B-209ENST00000428450 NUDCQ9Y266 331 aa15.26■□□□□ 0.03
DDX39B-209ENST00000428450 CEP290O15078 2479 aa15.25■□□□□ 0.03
DDX39B-209ENST00000428450 RANBP2P49792 3224 aaKnown RBP15.25■□□□□ 0.03
DDX39B-209ENST00000428450 SH3TC1Q8TE82 1336 aa15.25■□□□□ 0.03
DDX39B-209ENST00000428450 PITPNM2Q9BZ72 1349 aa15.25■□□□□ 0.03
DDX39B-209ENST00000428450 PRAMEF18Q5VWM3 479 aa15.25■□□□□ 0.03
DDX39B-209ENST00000428450 TBC1D16Q8TBP0 767 aa15.25■□□□□ 0.03
DDX39B-209ENST00000428450 CFAP53Q96M91 514 aa15.25■□□□□ 0.03
DDX39B-209ENST00000428450 EYA3Q99504 573 aa15.25■□□□□ 0.03
DDX39B-209ENST00000428450 ANXA1P04083 346 aa15.24■□□□□ 0.03
DDX39B-209ENST00000428450 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
DDX39B-209ENST00000428450 OTOP1Q7RTM1 612 aa15.24■□□□□ 0.03
DDX39B-209ENST00000428450 AGBL3Q8NEM8 1001 aa15.24■□□□□ 0.03
DDX39B-209ENST00000428450 GMLQ99445 158 aa15.24■□□□□ 0.03
DDX39B-209ENST00000428450 COL4A1P02462 1669 aa15.24■□□□□ 0.03
DDX39B-209ENST00000428450 ZNF609O15014 1411 aa15.24■□□□□ 0.03
DDX39B-209ENST00000428450 EN2P19622 333 aaPredicted RBP15.23■□□□□ 0.03
DDX39B-209ENST00000428450 SREBF2Q12772 1141 aa15.23■□□□□ 0.03
DDX39B-209ENST00000428450 TCIRG1Q13488 830 aa15.23■□□□□ 0.03
DDX39B-209ENST00000428450 SF3B3Q15393 1217 aaKnown RBP15.23■□□□□ 0.03
DDX39B-209ENST00000428450 HSP90AB3PQ58FF7 597 aa15.23■□□□□ 0.03
DDX39B-209ENST00000428450 RSBN1LQ6PCB5 846 aaPredicted RBP15.23■□□□□ 0.03
DDX39B-209ENST00000428450 MYOZ2Q9NPC6 264 aa15.23■□□□□ 0.03
DDX39B-209ENST00000428450 TRIM17Q9Y577 477 aa15.23■□□□□ 0.03
DDX39B-209ENST00000428450 COPS6Q7L5N1 327 aa15.22■□□□□ 0.03
DDX39B-209ENST00000428450 NECTIN2Q92692 538 aa15.22■□□□□ 0.03
DDX39B-209ENST00000428450 ZC3H12CQ9C0D7 883 aaKnown RBP15.22■□□□□ 0.03
DDX39B-209ENST00000428450 RBBP6Q7Z6E9 1792 aaKnown RBP15.21■□□□□ 0.03
DDX39B-209ENST00000428450 CLSPNQ9HAW4 1339 aa15.21■□□□□ 0.03
DDX39B-209ENST00000428450 COL6A3P12111 3177 aa15.21■□□□□ 0.03
DDX39B-209ENST00000428450 DDX60Q8IY21 1712 aaKnown RBP15.21■□□□□ 0.03
DDX39B-209ENST00000428450 EIF2S2P20042 333 aaKnown RBP15.21■□□□□ 0.03
DDX39B-209ENST00000428450 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
DDX39B-209ENST00000428450 PODXL2Q9NZ53 605 aa15.21■□□□□ 0.03
DDX39B-209ENST00000428450 USP17L8P0C7I0 530 aa15.2■□□□□ 0.02
DDX39B-209ENST00000428450 PTPN12Q05209 780 aaKnown RBP15.2■□□□□ 0.02
DDX39B-209ENST00000428450 XAGE3Q8WTP9 111 aa15.2■□□□□ 0.02
DDX39B-209ENST00000428450 ARMC5Q96C12 935 aa15.2■□□□□ 0.02
DDX39B-209ENST00000428450 PTPN22Q9Y2R2 807 aa15.2■□□□□ 0.02
DDX39B-209ENST00000428450 DLL1O00548 723 aa15.19■□□□□ 0.02
DDX39B-209ENST00000428450 ALDH1A1P00352 501 aa15.19■□□□□ 0.02
DDX39B-209ENST00000428450 AIMP1Q12904 312 aaKnown RBP15.19■□□□□ 0.02
DDX39B-209ENST00000428450 TTLL12Q14166 644 aaPredicted RBP15.19■□□□□ 0.02
DDX39B-209ENST00000428450 NBPF9Q3BBW0 867 aa15.19■□□□□ 0.02
DDX39B-209ENST00000428450 SPRYD7Q5W111 196 aa15.19■□□□□ 0.02
DDX39B-209ENST00000428450 OTUD5Q96G74 571 aa15.19■□□□□ 0.02
DDX39B-209ENST00000428450 DLG5Q8TDM6 1919 aa15.18■□□□□ 0.02
DDX39B-209ENST00000428450 RPS8P62241 208 aaKnown RBP15.18■□□□□ 0.02
DDX39B-209ENST00000428450 LDLRAD1Q5T700 205 aa15.18■□□□□ 0.02
DDX39B-209ENST00000428450 FAM89AQ96GI7 184 aa15.18■□□□□ 0.02
DDX39B-209ENST00000428450 CUL9Q8IWT3 2517 aa15.18■□□□□ 0.02
DDX39B-209ENST00000428450 IFNL1Q8IU54 200 aa15.17■□□□□ 0.02
DDX39B-209ENST00000428450 G3V3G9 751 aa15.16■□□□□ 0.02
DDX39B-209ENST00000428450 UFL1O94874 794 aa15.16■□□□□ 0.02
DDX39B-209ENST00000428450 PPP2R1AP30153 589 aa15.16■□□□□ 0.02
DDX39B-209ENST00000428450 CAP1Q01518 475 aa15.16■□□□□ 0.02
DDX39B-209ENST00000428450 DCAF8Q5TAQ9 597 aa15.16■□□□□ 0.02
DDX39B-209ENST00000428450 PLEKHF1Q96S99 279 aa15.16■□□□□ 0.02
DDX39B-209ENST00000428450 PSME4Q14997 1843 aa15.15■□□□□ 0.02
DDX39B-209ENST00000428450 H0YGN5 161 aa15.15■□□□□ 0.02
DDX39B-209ENST00000428450 IGF2BP3O00425 579 aaKnown RBP eCLIP15.15■□□□□ 0.02
DDX39B-209ENST00000428450 WNT10BO00744 389 aa15.15■□□□□ 0.02
DDX39B-209ENST00000428450 NF2P35240 595 aa15.15■□□□□ 0.02
DDX39B-209ENST00000428450 INHBEP58166 350 aa15.15■□□□□ 0.02
DDX39B-209ENST00000428450 ISCA1Q9BUE6 129 aa15.15■□□□□ 0.02
DDX39B-209ENST00000428450 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
DDX39B-209ENST00000428450 GGA1Q9UJY5 639 aa15.15■□□□□ 0.02
DDX39B-209ENST00000428450 USP17L3A6NCW0 530 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 USP17L4A6NCW7 530 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 MANSC4A6NHS7 340 aaPredicted RBP15.14■□□□□ 0.01
DDX39B-209ENST00000428450 PRKG1Q13976 671 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 USP17L1Q7RTZ2 530 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 ARMC9Q7Z3E5 817 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 CD99L2Q8TCZ2 262 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 ERO1AQ96HE7 468 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 ZNF333Q96JL9 665 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 SEC31BQ9NQW1 1179 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
DDX39B-209ENST00000428450 PODNQ7Z5L7 613 aa15.13■□□□□ 0.01
DDX39B-209ENST00000428450 SLC17A8Q8NDX2 589 aa15.13■□□□□ 0.01
DDX39B-209ENST00000428450 EFCC1Q9HA90 598 aa15.13■□□□□ 0.01
DDX39B-209ENST00000428450 FZD1Q9UP38 647 aa15.13■□□□□ 0.01
DDX39B-209ENST00000428450 RTL5Q5HYW3 569 aaPredicted RBP15.12■□□□□ 0.01
DDX39B-209ENST00000428450 TMEM106CQ9BVX2 250 aa15.12■□□□□ 0.01
DDX39B-209ENST00000428450 MXD3Q9BW11 206 aa15.12■□□□□ 0.01
DDX39B-209ENST00000428450 ANGEL1Q9UNK9 670 aaKnown RBP15.12■□□□□ 0.01
DDX39B-209ENST00000428450 LAMA3Q16787 3333 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms