RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 Rbbp8nlA2ABX0 614 aa20.62■□□□□ 0.89
Vps53-203ENSMUST00000108419 Becn1O88597 448 aa20.62■□□□□ 0.89
Vps53-203ENSMUST00000108419 Popdc2Q9ES82 367 aa20.62■□□□□ 0.89
Vps53-203ENSMUST00000108419 Sh3bp5Q9Z131 463 aa20.62■□□□□ 0.89
Vps53-203ENSMUST00000108419 Ccne2Q9Z238 404 aa20.62■□□□□ 0.89
Vps53-203ENSMUST00000108419 Nphp3Q7TNH6 1325 aa20.62■□□□□ 0.89
Vps53-203ENSMUST00000108419 Fam198bQ3UPI1 517 aa20.62■□□□□ 0.89
Vps53-203ENSMUST00000108419 Arid3aQ62431 601 aa20.62■□□□□ 0.89
Vps53-203ENSMUST00000108419 Gja10Q9WUS4 505 aa20.62■□□□□ 0.89
Vps53-203ENSMUST00000108419 Irf5P56477 497 aa20.61■□□□□ 0.89
Vps53-203ENSMUST00000108419 Plekho1Q9JIY0 408 aa20.61■□□□□ 0.89
Vps53-203ENSMUST00000108419 MeiocA2AG06 965 aa20.61■□□□□ 0.89
Vps53-203ENSMUST00000108419 Pde8bE9Q4S1 865 aa20.61■□□□□ 0.89
Vps53-203ENSMUST00000108419 CpzQ8R4V4 654 aa20.61■□□□□ 0.89
Vps53-203ENSMUST00000108419 Pmfbp1Q9WVQ0 1022 aa20.61■□□□□ 0.89
Vps53-203ENSMUST00000108419 Col11a2Q64739 1736 aa20.61■□□□□ 0.89
Vps53-203ENSMUST00000108419 Lrp5Q91VN0 1614 aa20.6■□□□□ 0.89
Vps53-203ENSMUST00000108419 Ddx46Q569Z5 1032 aaKnown RBP20.6■□□□□ 0.89
Vps53-203ENSMUST00000108419 Pde3bQ61409 1100 aa20.6■□□□□ 0.89
Vps53-203ENSMUST00000108419 Slc39a11Q8BWY7 342 aa20.6■□□□□ 0.89
Vps53-203ENSMUST00000108419 Tmem266Q8BZB3 538 aa20.6■□□□□ 0.89
Vps53-203ENSMUST00000108419 Rhot2Q8JZN7 620 aa20.6■□□□□ 0.89
Vps53-203ENSMUST00000108419 Kdm3aQ6PCM1 1323 aa20.6■□□□□ 0.89
Vps53-203ENSMUST00000108419 TsksO54887 585 aa20.59■□□□□ 0.89
Vps53-203ENSMUST00000108419 Atp2b3Q0VF55 1220 aa20.59■□□□□ 0.89
Vps53-203ENSMUST00000108419 Stk11ipQ3TAA7 1072 aa20.59■□□□□ 0.89
Vps53-203ENSMUST00000108419 Plekhf1Q3TB82 279 aa20.59■□□□□ 0.89
Vps53-203ENSMUST00000108419 ZyxQ62523 564 aa20.59■□□□□ 0.89
Vps53-203ENSMUST00000108419 Pnma3Q8JZW8 466 aa20.59■□□□□ 0.89
Vps53-203ENSMUST00000108419 Rnf123Q5XPI3 1314 aa20.59■□□□□ 0.89
Vps53-203ENSMUST00000108419 Ppfia1B2RXQ2 1266 aa20.59■□□□□ 0.89
Vps53-203ENSMUST00000108419 Eva1cP58659 440 aa20.59■□□□□ 0.89
Vps53-203ENSMUST00000108419 Plbd2Q3TCN2 594 aa20.59■□□□□ 0.89
Vps53-203ENSMUST00000108419 Tshz3Q8CGV9 1081 aa20.58■□□□□ 0.88
Vps53-203ENSMUST00000108419 Krt25Q8VCW2 446 aa20.58■□□□□ 0.88
Vps53-203ENSMUST00000108419 Sf3b3Q921M3 1217 aaKnown RBP20.58■□□□□ 0.88
Vps53-203ENSMUST00000108419 Mctp2Q5RJH2 878 aa20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Ltv1Q6NSQ7 470 aaKnown RBP20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Golim4Q8BXA1 655 aa20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Tmem143Q8VD26 458 aa20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Lgr5Q9Z1P4 907 aa20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Col22a1E9Q7P1 1613 aa20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Mdm2P23804 489 aa20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Znf496Q5SXI5 585 aa20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Rbm26Q6NZN0 1012 aaKnown RBP20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Mrps27Q8BK72 415 aaKnown RBP20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Kdm4aQ8BW72 1064 aa20.57■□□□□ 0.88
Vps53-203ENSMUST00000108419 Golgb1E9PVZ8 3238 aa20.56■□□□□ 0.88
Vps53-203ENSMUST00000108419 NpeppsQ11011 920 aa20.56■□□□□ 0.88
Vps53-203ENSMUST00000108419 Mlh1Q9JK91 760 aa20.56■□□□□ 0.88
Vps53-203ENSMUST00000108419 1700029H14RikE9PY36 240 aa20.55■□□□□ 0.88
Vps53-203ENSMUST00000108419 Gzf1Q4VBD9 706 aa20.55■□□□□ 0.88
Vps53-203ENSMUST00000108419 Sptlc3Q8BG54 563 aa20.55■□□□□ 0.88
Vps53-203ENSMUST00000108419 Jakmip1Q8BVL9 626 aa20.55■□□□□ 0.88
Vps53-203ENSMUST00000108419 CpvlQ9D3S9 478 aa20.55■□□□□ 0.88
Vps53-203ENSMUST00000108419 Kcnq5Q9JK45 933 aa20.55■□□□□ 0.88
Vps53-203ENSMUST00000108419 Zscan25B2RX31 543 aa20.54■□□□□ 0.88
Vps53-203ENSMUST00000108419 Sept1P42209 366 aa20.54■□□□□ 0.88
Vps53-203ENSMUST00000108419 Pank2Q3U4S0 443 aa20.54■□□□□ 0.88
Vps53-203ENSMUST00000108419 Msl1Q6PDM1 616 aa20.54■□□□□ 0.88
Vps53-203ENSMUST00000108419 TnksQ6PFX9 1320 aa20.54■□□□□ 0.88
Vps53-203ENSMUST00000108419 Zkscan16A2ALW2 728 aa20.54■□□□□ 0.88
Vps53-203ENSMUST00000108419 Ube4aE9Q735 1028 aa20.54■□□□□ 0.88
Vps53-203ENSMUST00000108419 Rcan3Q9JKK0 239 aa20.54■□□□□ 0.88
Vps53-203ENSMUST00000108419 IncenpQ9WU62 880 aa20.54■□□□□ 0.88
Vps53-203ENSMUST00000108419 Cfap44E9Q5M6 1843 aa20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 Hmgb2P30681 210 aaKnown RBP20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 NppbP40753 121 aa20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 1810065E05RikQ5NC41 235 aa20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 Ift57Q8BXG3 429 aa20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 Top1mtQ8R4U6 593 aa20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 Gdpd2Q9ESM6 539 aa20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 Kif13bA0A286YCV9 1847 aa20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 Jdp2P97875 163 aa20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 Glipr1l2Q9CQ35 332 aa20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 Pus3Q9JI38 481 aa20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 Znfx1Q8R151 1909 aaKnown RBP20.53■□□□□ 0.88
Vps53-203ENSMUST00000108419 Adamtsl1Q8BLI0 1745 aa20.52■□□□□ 0.88
Vps53-203ENSMUST00000108419 Syce3B5KM66 88 aa20.52■□□□□ 0.88
Vps53-203ENSMUST00000108419 Ddx11Q6AXC6 880 aa20.52■□□□□ 0.88
Vps53-203ENSMUST00000108419 Rdm1Q9CQK3 281 aa20.52■□□□□ 0.88
Vps53-203ENSMUST00000108419 Spata31d1bE9QA57 1361 aa20.52■□□□□ 0.87
Vps53-203ENSMUST00000108419 Cyp3a57D3YYZ0 503 aa20.51■□□□□ 0.87
Vps53-203ENSMUST00000108419 Ms4a2P20490 235 aa20.51■□□□□ 0.87
Vps53-203ENSMUST00000108419 Fbxo3Q9DC63 480 aa20.51■□□□□ 0.87
Vps53-203ENSMUST00000108419 Rad50P70388 1312 aa20.51■□□□□ 0.87
Vps53-203ENSMUST00000108419 Nlrp9aQ66X03 949 aa20.51■□□□□ 0.87
Vps53-203ENSMUST00000108419 Vwa3bJ9JI28 736 aa20.5■□□□□ 0.87
Vps53-203ENSMUST00000108419 Mindy4Q3UQI9 744 aa20.5■□□□□ 0.87
Vps53-203ENSMUST00000108419 Ppil4Q9CXG3 492 aaKnown RBP20.5■□□□□ 0.87
Vps53-203ENSMUST00000108419 Lekr1B2RVN1 116 aa20.5■□□□□ 0.87
Vps53-203ENSMUST00000108419 Speer4dL7N216 212 aa20.5■□□□□ 0.87
Vps53-203ENSMUST00000108419 Gm4340L7N2C4 268 aa20.5■□□□□ 0.87
Vps53-203ENSMUST00000108419 GabrdP22933 449 aa20.5■□□□□ 0.87
Vps53-203ENSMUST00000108419 IntuQ059U7 942 aa20.5■□□□□ 0.87
Vps53-203ENSMUST00000108419 Sde2Q8K1J5 448 aaKnown RBP20.5■□□□□ 0.87
Vps53-203ENSMUST00000108419 Rps8P62242 208 aaKnown RBP20.49■□□□□ 0.87
Vps53-203ENSMUST00000108419 Ifit2Q64112 472 aa20.49■□□□□ 0.87
Vps53-203ENSMUST00000108419 E4f1Q8CCE9 783 aa20.49■□□□□ 0.87
Vps53-203ENSMUST00000108419 Gripap1Q8VD04 806 aa20.49■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms