RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Rassf8Q8CJ96 419 aa10.49□□□□□ -0.73
Trim39-201ENSMUST00000042717 Adarb2Q9JI20 745 aa10.49□□□□□ -0.73
Trim39-201ENSMUST00000042717 Zkscan16A2ALW2 728 aa10.49□□□□□ -0.73
Trim39-201ENSMUST00000042717 Ube4aE9Q735 1028 aa10.49□□□□□ -0.73
Trim39-201ENSMUST00000042717 Sept1P42209 366 aa10.49□□□□□ -0.73
Trim39-201ENSMUST00000042717 HlfQ8BW74 295 aa10.49□□□□□ -0.73
Trim39-201ENSMUST00000042717 St5Q924W7 1134 aa10.49□□□□□ -0.73
Trim39-201ENSMUST00000042717 Tbc1d8Q9Z1A9 1134 aa10.49□□□□□ -0.73
Trim39-201ENSMUST00000042717 Sh3tc1G3X9F6 1346 aa10.49□□□□□ -0.73
Trim39-201ENSMUST00000042717 Ercc3P49135 783 aa10.48□□□□□ -0.73
Trim39-201ENSMUST00000042717 Sf3b3Q921M3 1217 aaKnown RBP10.48□□□□□ -0.73
Trim39-201ENSMUST00000042717 Nphp3Q7TNH6 1325 aa10.48□□□□□ -0.73
Trim39-201ENSMUST00000042717 Tbc1d4Q8BYJ6 1307 aa10.48□□□□□ -0.73
Trim39-201ENSMUST00000042717 Dok7Q18PE0 504 aa10.48□□□□□ -0.73
Trim39-201ENSMUST00000042717 Plekhf1Q3TB82 279 aa10.48□□□□□ -0.73
Trim39-201ENSMUST00000042717 Ift57Q8BXG3 429 aa10.48□□□□□ -0.73
Trim39-201ENSMUST00000042717 Slc14a2Q8R4T9 930 aa10.48□□□□□ -0.73
Trim39-201ENSMUST00000042717 ParvgQ9ERD8 331 aa10.48□□□□□ -0.73
Trim39-201ENSMUST00000042717 Greb1lB9EJV3 1913 aa10.48□□□□□ -0.73
Trim39-201ENSMUST00000042717 Kif23E9Q5G3 953 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 GabrdP22933 449 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Mctp2Q5RJH2 878 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Atxn2lQ7TQH0 1049 aaKnown RBP10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Fam160b2Q80YR2 744 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 McamQ8R2Y2 648 aaKnown RBP10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Oas2E9Q9A9 742 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Wdhd1P59328 1117 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Ifit2Q64112 472 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Emilin1Q99K41 1017 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Rgs17Q9QZB0 210 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Col11a2Q64739 1736 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Rbm8a2A0A0N4SUH6 174 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Gm4340L7N2C4 268 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Pla2g4fQ50L41 855 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Ezh2Q61188 746 aaKnown RBP10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Rdm1Q9CQK3 281 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Rbm8aQ9CWZ3 174 aa10.47□□□□□ -0.73
Trim39-201ENSMUST00000042717 Rad50P70388 1312 aa10.46□□□□□ -0.73
Trim39-201ENSMUST00000042717 Cyp3a57D3YYZ0 503 aa10.46□□□□□ -0.73
Trim39-201ENSMUST00000042717 F2rP30558 430 aa10.46□□□□□ -0.73
Trim39-201ENSMUST00000042717 NfixP70257 488 aa10.46□□□□□ -0.73
Trim39-201ENSMUST00000042717 Lmod1Q8BVA4 595 aa10.46□□□□□ -0.73
Trim39-201ENSMUST00000042717 Tbc1d7Q9D0K0 293 aa10.46□□□□□ -0.73
Trim39-201ENSMUST00000042717 Osbpl5Q9ER64 874 aa10.46□□□□□ -0.73
Trim39-201ENSMUST00000042717 ZyxQ62523 564 aa10.46□□□□□ -0.74
Trim39-201ENSMUST00000042717 EngaseQ8BX80 734 aa10.46□□□□□ -0.74
Trim39-201ENSMUST00000042717 Plcd4Q8K3R3 807 aa10.46□□□□□ -0.74
Trim39-201ENSMUST00000042717 Riok1Q922Q2 567 aa10.46□□□□□ -0.74
Trim39-201ENSMUST00000042717 Sept12Q9D451 317 aa10.46□□□□□ -0.74
Trim39-201ENSMUST00000042717 Kcnq5Q9JK45 933 aa10.46□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ak2Q9WTP6 239 aa10.46□□□□□ -0.74
Trim39-201ENSMUST00000042717 Irs4Q9Z0Y7 1216 aa10.46□□□□□ -0.74
Trim39-201ENSMUST00000042717 Cyp2d10P24456 504 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 1700010I14RikQ7TPG0 532 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Tceanc2Q8R2M0 207 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Duox1A2AQ92 1551 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Adamtsl1Q8BLI0 1745 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Plch1Q4KWH5 1682 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Map3k15A2AQW0 1331 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ugt1a5B2RT14 529 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Sept9Q80UG5 583 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Trim56Q80VI1 734 aaKnown RBP10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Q8C6G1 249 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Polr3dQ91WD1 398 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Dydc2Q9D3X8 139 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 PhaxQ9JJT9 385 aaKnown RBP10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Setdb1O88974 1307 aa10.45□□□□□ -0.74
Trim39-201ENSMUST00000042717 Prl3d1P18121 224 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Apba2P98084 750 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Washc4Q3UMB9 1173 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Strip1Q8C079 837 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Kcnq3Q8K3F6 873 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Erc1Q99MI1 1120 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ubr3Q5U430 1889 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Kif13bA0A286YCV9 1847 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Catsper2A2ARP9 588 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Mapkapk5O54992 473 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ccdc6D3YZP9 469 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Hmgb2P30681 210 aaKnown RBP10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Nek11Q8C0Q4 628 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Mb21d2Q8C525 428 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Col23a1Q8K4G2 532 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Lrrfip2Q91WK0 415 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Slx4ipQ9D7Y9 413 aa10.44□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ythdc1E9Q5K9 736 aaKnown RBP10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Ms4a2P20490 235 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Fam83bQ0VBM2 1012 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Fchsd1Q6PFY1 688 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Dmrtc1Q9D9R7 182 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Letm1Q9Z2I0 738 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Prdm11A2AGX3 565 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Terf2O35144 541 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Zbtb7aO88939 569 aaKnown RBP10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Il15P48346 162 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 EvcP57680 1005 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Gjb2Q00977 226 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Hand2Q61039 217 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Edrf1Q6GQV7 1239 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Kank4Q6P9J5 1016 aa10.43□□□□□ -0.74
Trim39-201ENSMUST00000042717 Map10Q8BJS7 891 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms