RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 YGR125WP53273 1036 aa3.66□□□□□ -1.82
snR42snR42 SNO2P53823 222 aa3.66□□□□□ -1.82
snR42snR42 ELA1P53861 379 aaPredicted RBP3.66□□□□□ -1.82
snR42snR42 RPT6Q01939 405 aaKnown RBP3.66□□□□□ -1.82
snR42snR42 SVF1Q05515 481 aa3.66□□□□□ -1.82
snR42snR42 CLF1Q12309 687 aaPredicted RBP3.66□□□□□ -1.82
snR42snR42 PGA3Q12746 312 aaKnown RBP3.66□□□□□ -1.82
snR42snR42 ECM29P38737 1868 aa3.66□□□□□ -1.82
snR42snR42 TUS1Q06412 1307 aa3.66□□□□□ -1.82
snR42snR42 MAK31P23059 88 aa3.65□□□□□ -1.83
snR42snR42 SEC20P28791 383 aa3.65□□□□□ -1.83
snR42snR42 CTS1P29029 562 aa3.65□□□□□ -1.83
snR42snR42 MCM4P30665 933 aaKnown RBP3.65□□□□□ -1.83
snR42snR42 SHP1P34223 423 aa3.65□□□□□ -1.83
snR42snR42 AAP1P37898 856 aaKnown RBP3.65□□□□□ -1.83
snR42snR42 TPM2P40414 161 aa3.65□□□□□ -1.83
snR42snR42 CSM2P40465 213 aa3.65□□□□□ -1.83
snR42snR42 FMS1P50264 508 aa3.65□□□□□ -1.83
snR42snR42 HUL5P53119 910 aa3.65□□□□□ -1.83
snR42snR42 HDA1P53973 706 aa3.65□□□□□ -1.83
snR42snR42 TMA64Q04600 565 aaKnown RBP3.65□□□□□ -1.83
snR42snR42 EST2Q06163 884 aa3.65□□□□□ -1.83
snR42snR42 AVO1Q08236 1176 aa3.65□□□□□ -1.83
snR42snR42 PUS7Q08647 676 aaKnown RBP3.65□□□□□ -1.83
snR42snR42 MDM20Q12387 796 aaKnown RBP3.65□□□□□ -1.83
snR42snR42 SES1P07284 462 aaKnown RBP3.64□□□□□ -1.83
snR42snR42 RPL8AP17076 256 aaKnown RBP3.64□□□□□ -1.83
snR42snR42 TFC4P33339 1025 aa3.64□□□□□ -1.83
snR42snR42 MCR1P36060 302 aaKnown RBP3.64□□□□□ -1.83
snR42snR42 BRN1P38170 754 aa3.64□□□□□ -1.83
snR42snR42 REG2P38232 338 aa3.64□□□□□ -1.83
snR42snR42 KSP1P38691 1029 aaKnown RBP3.64□□□□□ -1.83
snR42snR42 NOC2P39744 710 aaKnown RBP3.64□□□□□ -1.83
snR42snR42 SKP2P42843 763 aa3.64□□□□□ -1.83
snR42snR42 YFL040WP43562 540 aa3.64□□□□□ -1.83
snR42snR42 FOL2P51601 243 aaKnown RBP3.64□□□□□ -1.83
snR42snR42 ARP5P53946 755 aa3.64□□□□□ -1.83
snR42snR42 DUS3Q06053 668 aaKnown RBP3.64□□□□□ -1.83
snR42snR42 SPH1Q06160 661 aa3.64□□□□□ -1.83
snR42snR42 TFC6Q06339 672 aa3.64□□□□□ -1.83
snR42snR42 SUE1Q06524 206 aa3.64□□□□□ -1.83
snR42snR42 ERP3Q12403 225 aa3.64□□□□□ -1.83
snR42snR42 CIT1P00890 479 aa3.63□□□□□ -1.83
snR42snR42 FUR4P05316 633 aaKnown RBP3.63□□□□□ -1.83
snR42snR42 TKL1P23254 680 aaKnown RBP3.63□□□□□ -1.83
snR42snR42 PEP3P27801 918 aa3.63□□□□□ -1.83
snR42snR42 SEC8P32855 1065 aa3.63□□□□□ -1.83
snR42snR42 DUR3P33413 735 aa3.63□□□□□ -1.83
snR42snR42 TGL1P34163 548 aa3.63□□□□□ -1.83
snR42snR42 NDT80P38830 627 aa3.63□□□□□ -1.83
snR42snR42 AFG3P39925 761 aa3.63□□□□□ -1.83
snR42snR42 LIF1P53150 421 aa3.63□□□□□ -1.83
snR42snR42 YGL039WP53183 348 aaKnown RBP3.63□□□□□ -1.83
snR42snR42 DAK1P54838 584 aaKnown RBP3.63□□□□□ -1.83
snR42snR42 MDM1Q01846 1127 aa3.63□□□□□ -1.83
snR42snR42 RSC4Q02206 625 aa3.63□□□□□ -1.83
snR42snR42 FMP30Q02883 468 aa3.63□□□□□ -1.83
snR42snR42 YML083CQ04526 418 aa3.63□□□□□ -1.83
snR42snR42 ECM30Q06673 1274 aa3.63□□□□□ -1.83
snR42snR42 VIP1Q06685 1146 aaKnown RBP3.63□□□□□ -1.83
snR42snR42 YLL058WQ12198 575 aa3.63□□□□□ -1.83
snR42snR42 TRM11Q12463 433 aa3.63□□□□□ -1.83
snR42snR42 RTP1Q12751 981 aa3.63□□□□□ -1.83
snR42snR42 TY1B-AO13527 1196 aaKnown RBP3.62□□□□□ -1.83
snR42snR42 POX1P13711 748 aa3.62□□□□□ -1.83
snR42snR42 HCA4P20448 770 aaKnown RBP3.62□□□□□ -1.83
snR42snR42 YUR1P26725 428 aa3.62□□□□□ -1.83
snR42snR42 BCS1P32839 456 aa3.62□□□□□ -1.83
snR42snR42 AIM21P40563 679 aa3.62□□□□□ -1.83
snR42snR42 HXT17P53631 564 aa3.62□□□□□ -1.83
snR42snR42 VPS72Q03388 795 aa3.62□□□□□ -1.83
snR42snR42 TPP1Q03796 238 aa3.62□□□□□ -1.83
snR42snR42 MYO5Q04439 1219 aaKnown RBP3.62□□□□□ -1.83
snR42snR42 YDR341CQ05506 607 aaKnown RBP3.62□□□□□ -1.83
snR42snR42 DSE3Q08729 430 aa3.62□□□□□ -1.83
snR42snR42 OXR1Q08952 273 aa3.62□□□□□ -1.83
snR42snR42 YOR111WQ99210 232 aa3.62□□□□□ -1.83
snR42snR42 MAS2P11914 482 aa3.61□□□□□ -1.83
snR42snR42 SAM35P14693 329 aa3.61□□□□□ -1.83
snR42snR42 TIM23P32897 222 aa3.61□□□□□ -1.83
snR42snR42 SAS3P34218 831 aa3.61□□□□□ -1.83
snR42snR42 HXT13P39924 564 aa3.61□□□□□ -1.83
snR42snR42 VID28P40547 921 aa3.61□□□□□ -1.83
snR42snR42 SGM1P47166 707 aa3.61□□□□□ -1.83
snR42snR42 YVH1Q02256 364 aaKnown RBP3.61□□□□□ -1.83
snR42snR42 SMD2Q06217 110 aaKnown RBP3.61□□□□□ -1.83
snR42snR42 GUD1Q07729 489 aa3.61□□□□□ -1.83
snR42snR42 ISA1Q07821 250 aaPredicted RBP3.61□□□□□ -1.83
snR42snR42 AHC1Q12433 566 aa3.61□□□□□ -1.83
snR42snR42 YDR524C-BQ3E6R4 66 aa3.61□□□□□ -1.83
snR42snR42 PHR1P05066 565 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
snR42snR42 MET6P05694 767 aaKnown RBP3.6□□□□□ -1.83
snR42snR42 HIP1P06775 603 aa3.6□□□□□ -1.83
snR42snR42 HEM1P09950 548 aaPredicted RBP3.6□□□□□ -1.83
snR42snR42 SNA3P14359 133 aa3.6□□□□□ -1.83
snR42snR42 STI1P15705 589 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
snR42snR42 SRP54P20424 541 aaKnown RBP3.6□□□□□ -1.83
snR42snR42 RNR3P21672 869 aaKnown RBP3.6□□□□□ -1.83
snR42snR42 CDC48P25694 835 aaKnown RBP3.6□□□□□ -1.83
snR42snR42 DID4P36108 232 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms