RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W NOP8Q08287 484 aaPredicted RBP3.07□□□□□ -1.92
YOP1YPR028W OSW1Q08692 278 aa3.07□□□□□ -1.92
YOP1YPR028W CIR2Q08822 631 aa3.07□□□□□ -1.92
YOP1YPR028W NPP1P25353 742 aa3.06□□□□□ -1.92
YOP1YPR028W YRO2P38079 344 aa3.06□□□□□ -1.92
YOP1YPR028W PAC2P39937 518 aa3.06□□□□□ -1.92
YOP1YPR028W MEP2P41948 499 aa3.06□□□□□ -1.92
YOP1YPR028W CWC24P53769 259 aa3.06□□□□□ -1.92
YOP1YPR028W ASI2P53895 289 aa3.06□□□□□ -1.92
YOP1YPR028W YKR011CQ02209 353 aa3.06□□□□□ -1.92
YOP1YPR028W VPS16Q03308 798 aa3.06□□□□□ -1.92
YOP1YPR028W RPS9AO13516 197 aaKnown RBP3.05□□□□□ -1.92
YOP1YPR028W MPH2P0CD99 609 aa3.05□□□□□ -1.92
YOP1YPR028W LAT1P12695 482 aaKnown RBP3.05□□□□□ -1.92
YOP1YPR028W NGG1P32494 702 aa3.05□□□□□ -1.92
YOP1YPR028W VBA5P36172 582 aa3.05□□□□□ -1.92
YOP1YPR028W BCD1P38772 366 aa3.05□□□□□ -1.92
YOP1YPR028W NDC80P40460 691 aa3.05□□□□□ -1.92
YOP1YPR028W YLR149CQ99296 730 aa3.05□□□□□ -1.92
YOP1YPR028W CLN2P20438 545 aa3.04□□□□□ -1.92
YOP1YPR028W XBP1P40489 647 aa3.04□□□□□ -1.92
YOP1YPR028W CCM1P48237 864 aaPredicted RBP3.04□□□□□ -1.92
YOP1YPR028W YAP1802P53309 568 aa3.04□□□□□ -1.92
YOP1YPR028W HDA1P53973 706 aa3.04□□□□□ -1.92
YOP1YPR028W NRG1Q03125 231 aa3.04□□□□□ -1.92
YOP1YPR028W ASM4Q05166 528 aa3.04□□□□□ -1.92
YOP1YPR028W STE4P18851 423 aa3.03□□□□□ -1.92
YOP1YPR028W URA1P28272 314 aaPredicted RBP3.03□□□□□ -1.92
YOP1YPR028W RSP5P39940 809 aaKnown RBP3.03□□□□□ -1.92
YOP1YPR028W UBC11P52492 156 aa3.03□□□□□ -1.92
YOP1YPR028W SHE9Q04172 456 aa3.03□□□□□ -1.92
YOP1YPR028W ERG11P10614 530 aa3.02□□□□□ -1.93
YOP1YPR028W AFR1P33304 620 aa3.02□□□□□ -1.93
YOP1YPR028W GLG1P36143 616 aa3.02□□□□□ -1.93
YOP1YPR028W MAD1P40957 749 aa3.02□□□□□ -1.93
YOP1YPR028W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
YOP1YPR028W PGK1P00560 416 aaKnown RBP3.01□□□□□ -1.93
YOP1YPR028W PRI2P20457 528 aa3.01□□□□□ -1.93
YOP1YPR028W MRP8P35719 219 aa3.01□□□□□ -1.93
YOP1YPR028W BDH2P39713 417 aa3.01□□□□□ -1.93
YOP1YPR028W SIT1P39980 628 aa3.01□□□□□ -1.93
YOP1YPR028W HOS4P40480 1083 aa3.01□□□□□ -1.93
YOP1YPR028W SLK19Q08581 821 aaKnown RBP3.01□□□□□ -1.93
YOP1YPR028W NAP1P25293 417 aaKnown RBP3□□□□□ -1.93
YOP1YPR028W HIR1P32479 840 aa3□□□□□ -1.93
YOP1YPR028W REC104P33323 182 aa3□□□□□ -1.93
YOP1YPR028W HRB1P38922 454 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
YOP1YPR028W PZF1P39933 429 aa3□□□□□ -1.93
YOP1YPR028W CTR1P49573 406 aa3□□□□□ -1.93
YOP1YPR028W UBC9P50623 157 aaPredicted RBP3□□□□□ -1.93
YOP1YPR028W MRK1P50873 501 aa3□□□□□ -1.93
YOP1YPR028W MUS81Q04149 632 aaPredicted RBP3□□□□□ -1.93
YOP1YPR028W LCD1Q04377 747 aa3□□□□□ -1.93
YOP1YPR028W OPI10Q08202 246 aa3□□□□□ -1.93
YOP1YPR028W YLR415CO13578 112 aa2.99□□□□□ -1.93
YOP1YPR028W PRP9P19736 530 aaKnown RBP2.99□□□□□ -1.93
YOP1YPR028W ERT1P38140 529 aa2.99□□□□□ -1.93
YOP1YPR028W PBY1P38254 753 aa2.99□□□□□ -1.93
YOP1YPR028W UBS1P38290 277 aa2.99□□□□□ -1.93
YOP1YPR028W REV7P38927 245 aa2.99□□□□□ -1.93
YOP1YPR028W TOK1P40310 691 aa2.99□□□□□ -1.93
YOP1YPR028W ARG2P40360 574 aa2.99□□□□□ -1.93
YOP1YPR028W TGL5Q12043 749 aa2.99□□□□□ -1.93
YOP1YPR028W NOP1P15646 327 aaKnown RBP2.98□□□□□ -1.93
YOP1YPR028W NUP1P20676 1076 aa2.98□□□□□ -1.93
YOP1YPR028W SCT1P32784 759 aa2.98□□□□□ -1.93
YOP1YPR028W SPC29P33419 253 aa2.98□□□□□ -1.93
YOP1YPR028W YKL069WP36088 180 aa2.98□□□□□ -1.93
YOP1YPR028W DUS1P53759 423 aaKnown RBP2.98□□□□□ -1.93
YOP1YPR028W ATG11Q12527 1178 aa2.98□□□□□ -1.93
YOP1YPR028W CYS3P31373 394 aaKnown RBP2.97□□□□□ -1.93
YOP1YPR028W IRR1P40541 1150 aa2.97□□□□□ -1.93
YOP1YPR028W YPL068CQ02749 293 aa2.97□□□□□ -1.93
YOP1YPR028W PIN2Q12057 282 aa2.97□□□□□ -1.93
YOP1YPR028W HAL9Q12180 1030 aa2.97□□□□□ -1.93
YOP1YPR028W SIR3P06701 978 aa2.96□□□□□ -1.94
YOP1YPR028W PYC1P11154 1178 aaKnown RBP2.96□□□□□ -1.94
YOP1YPR028W CDC11P32458 415 aa2.96□□□□□ -1.94
YOP1YPR028W SAK1P38990 1142 aa2.96□□□□□ -1.94
YOP1YPR028W GIS2P53849 153 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
YOP1YPR028W BUL2Q03758 920 aaKnown RBP2.96□□□□□ -1.94
YOP1YPR028W GEP3Q08622 556 aa2.96□□□□□ -1.94
YOP1YPR028W PRC1P00729 532 aa2.95□□□□□ -1.94
YOP1YPR028W BAP3P41815 604 aa2.95□□□□□ -1.94
YOP1YPR028W PFA3P42836 336 aa2.95□□□□□ -1.94
YOP1YPR028W SSY5P47002 699 aa2.95□□□□□ -1.94
YOP1YPR028W NIT3P49954 291 aa2.95□□□□□ -1.94
YOP1YPR028W RSC3Q06639 885 aa2.95□□□□□ -1.94
YOP1YPR028W YOR022CQ12204 715 aa2.95□□□□□ -1.94
YOP1YPR028W YPR071WQ12346 211 aa2.95□□□□□ -1.94
YOP1YPR028W PHR1P05066 565 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
YOP1YPR028W HBS1P32769 611 aaKnown RBP2.94□□□□□ -1.94
YOP1YPR028W MUP3P38734 546 aa2.94□□□□□ -1.94
YOP1YPR028W NOG2P53742 486 aaKnown RBP2.94□□□□□ -1.94
YOP1YPR028W JIP5Q06214 492 aaPredicted RBP2.94□□□□□ -1.94
YOP1YPR028W YKL033W-AQ86ZR7 236 aa2.94□□□□□ -1.94
YOP1YPR028W APN1P22936 367 aa2.93□□□□□ -1.94
YOP1YPR028W CCR4P31384 837 aaKnown RBP2.93□□□□□ -1.94
YOP1YPR028W SAP190P36123 1033 aa2.93□□□□□ -1.94
YOP1YPR028W YBR284WP38150 797 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms