RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C SMC5Q08204 1093 aa3.6□□□□□ -1.83
RPA135YPR010C PIN2Q12057 282 aa3.6□□□□□ -1.83
RPA135YPR010C MED1Q12321 566 aa3.6□□□□□ -1.83
RPA135YPR010C CDC8P00572 216 aa3.6□□□□□ -1.83
RPA135YPR010C PHO13P19881 312 aa3.6□□□□□ -1.83
RPA135YPR010C RAD57P25301 460 aa3.6□□□□□ -1.83
RPA135YPR010C DAL1P32375 460 aa3.6□□□□□ -1.83
RPA135YPR010C ECM32P32644 1121 aaKnown RBP3.6□□□□□ -1.83
RPA135YPR010C RFT1P38206 574 aaPredicted RBP3.6□□□□□ -1.83
RPA135YPR010C VID24P38263 362 aa3.6□□□□□ -1.83
RPA135YPR010C YHR020WP38708 688 aaKnown RBP3.6□□□□□ -1.83
RPA135YPR010C CCT4P39078 528 aaKnown RBP3.6□□□□□ -1.83
RPA135YPR010C YTA12P40341 825 aa3.6□□□□□ -1.83
RPA135YPR010C MKT1P40850 830 aaKnown RBP3.6□□□□□ -1.83
RPA135YPR010C DRN1P53255 507 aaKnown RBP3.6□□□□□ -1.83
RPA135YPR010C DUS4Q06063 367 aa3.6□□□□□ -1.83
RPA135YPR010C YPL277CQ08989 487 aa3.6□□□□□ -1.83
RPA135YPR010C HMI1Q12039 706 aa3.6□□□□□ -1.83
RPA135YPR010C ZPS1Q12512 249 aa3.6□□□□□ -1.83
RPA135YPR010C ISY1P21374 235 aaPredicted RBP3.59□□□□□ -1.83
RPA135YPR010C MUD1P32605 298 aaKnown RBP3.59□□□□□ -1.83
RPA135YPR010C PEA2P40091 420 aa3.59□□□□□ -1.83
RPA135YPR010C STB4P50104 949 aa3.59□□□□□ -1.83
RPA135YPR010C YNL058CP53947 316 aa3.59□□□□□ -1.83
RPA135YPR010C OMS1Q06668 471 aa3.59□□□□□ -1.83
RPA135YPR010C POL3P15436 1097 aa3.59□□□□□ -1.83
RPA135YPR010C UBC6P33296 250 aaPredicted RBP3.59□□□□□ -1.83
RPA135YPR010C PGM2P37012 569 aaKnown RBP3.59□□□□□ -1.83
RPA135YPR010C ECM2P38241 364 aaKnown RBP3.59□□□□□ -1.83
RPA135YPR010C HIS2P38635 335 aa3.59□□□□□ -1.83
RPA135YPR010C INP51P40559 946 aaKnown RBP3.59□□□□□ -1.83
RPA135YPR010C SCD6P45978 349 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
RPA135YPR010C SOL4P53315 255 aa3.59□□□□□ -1.83
RPA135YPR010C SML1Q04964 104 aa3.59□□□□□ -1.83
RPA135YPR010C RPL4AP10664 362 aaKnown RBP3.59□□□□□ -1.84
RPA135YPR010C LRE1P25579 583 aaKnown RBP3.59□□□□□ -1.84
RPA135YPR010C IRE1P32361 1115 aa3.59□□□□□ -1.84
RPA135YPR010C PEX2P32800 271 aa3.59□□□□□ -1.84
RPA135YPR010C KTR2P33550 425 aa3.59□□□□□ -1.84
RPA135YPR010C CCT2P39076 527 aaKnown RBP3.59□□□□□ -1.84
RPA135YPR010C BRE2P43132 505 aa3.59□□□□□ -1.84
RPA135YPR010C DAK2P43550 591 aa3.59□□□□□ -1.84
RPA135YPR010C TAF1P46677 1066 aa3.59□□□□□ -1.84
RPA135YPR010C YJR120WP47157 116 aa3.59□□□□□ -1.84
RPA135YPR010C CLA4P48562 842 aa3.59□□□□□ -1.84
RPA135YPR010C RPL4BP49626 362 aaKnown RBP3.59□□□□□ -1.84
RPA135YPR010C YGR021WP53212 290 aa3.59□□□□□ -1.84
RPA135YPR010C ESF2P53743 316 aaKnown RBP3.59□□□□□ -1.84
RPA135YPR010C RPA49Q01080 415 aaPredicted RBP3.59□□□□□ -1.84
RPA135YPR010C POB3Q04636 552 aaKnown RBP3.59□□□□□ -1.84
RPA135YPR010C PHR1P05066 565 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
RPA135YPR010C SRO9P25567 434 aaKnown RBP3.58□□□□□ -1.84
RPA135YPR010C VTC4P47075 721 aa3.58□□□□□ -1.84
RPA135YPR010C COS5P47187 383 aa3.58□□□□□ -1.84
RPA135YPR010C HFM1P51979 1187 aa3.58□□□□□ -1.84
RPA135YPR010C ENV11P53246 860 aa3.58□□□□□ -1.84
RPA135YPR010C SKG3Q06315 1026 aa3.58□□□□□ -1.84
RPA135YPR010C ACM1Q08981 209 aa3.58□□□□□ -1.84
RPA135YPR010C PGK1P00560 416 aaKnown RBP3.58□□□□□ -1.84
RPA135YPR010C UTP7P40055 554 aaKnown RBP3.58□□□□□ -1.84
RPA135YPR010C NOG2P53742 486 aaKnown RBP3.58□□□□□ -1.84
RPA135YPR010C CFT2Q12102 859 aaPredicted RBP3.58□□□□□ -1.84
RPA135YPR010C ADE4P04046 510 aaKnown RBP3.58□□□□□ -1.84
RPA135YPR010C MAS2P11914 482 aa3.58□□□□□ -1.84
RPA135YPR010C VPS35P34110 944 aa3.58□□□□□ -1.84
RPA135YPR010C NCL1P38205 684 aaKnown RBP3.58□□□□□ -1.84
RPA135YPR010C MUM2P38236 366 aa3.58□□□□□ -1.84
RPA135YPR010C MCX1P38323 520 aaPredicted RBP3.58□□□□□ -1.84
RPA135YPR010C MEP1P40260 492 aa3.58□□□□□ -1.84
RPA135YPR010C DSN1P40568 576 aa3.58□□□□□ -1.84
RPA135YPR010C TAD1P53065 400 aa3.58□□□□□ -1.84
RPA135YPR010C KAP114P53067 1004 aa3.58□□□□□ -1.84
RPA135YPR010C DIG1Q03063 452 aaKnown RBP3.58□□□□□ -1.84
RPA135YPR010C NUT2Q06213 157 aa3.58□□□□□ -1.84
RPA135YPR010C EMP46Q12396 444 aa3.58□□□□□ -1.84
RPA135YPR010C CMD1P06787 147 aaKnown RBP3.57□□□□□ -1.84
RPA135YPR010C RPO26P20435 155 aa3.57□□□□□ -1.84
RPA135YPR010C TKL1P23254 680 aaKnown RBP3.57□□□□□ -1.84
RPA135YPR010C MCR1P36060 302 aaKnown RBP3.57□□□□□ -1.84
RPA135YPR010C BCH2P36122 765 aa3.57□□□□□ -1.84
RPA135YPR010C RRT2P38332 387 aa3.57□□□□□ -1.84
RPA135YPR010C TIF5P38431 405 aaKnown RBP3.57□□□□□ -1.84
RPA135YPR010C BCD1P38772 366 aa3.57□□□□□ -1.84
RPA135YPR010C CNN1P43618 361 aa3.57□□□□□ -1.84
RPA135YPR010C ARK1P53974 638 aa3.57□□□□□ -1.84
RPA135YPR010C STE20Q03497 939 aaKnown RBP3.57□□□□□ -1.84
RPA135YPR010C ABP140Q08641 628 aaKnown RBP3.57□□□□□ -1.84
RPA135YPR010C SAM3Q08986 587 aa3.57□□□□□ -1.84
RPA135YPR010C FOB1O13329 566 aa3.57□□□□□ -1.84
RPA135YPR010C RPB2P08518 1224 aaKnown RBP3.57□□□□□ -1.84
RPA135YPR010C SPO16P17122 198 aa3.57□□□□□ -1.84
RPA135YPR010C RRT12P25381 491 aa3.57□□□□□ -1.84
RPA135YPR010C PRR1P28708 518 aa3.57□□□□□ -1.84
RPA135YPR010C EUG1P32474 517 aa3.57□□□□□ -1.84
RPA135YPR010C SWI3P32591 825 aa3.57□□□□□ -1.84
RPA135YPR010C TIM23P32897 222 aa3.57□□□□□ -1.84
RPA135YPR010C SEG2P34250 1132 aa3.57□□□□□ -1.84
RPA135YPR010C YKR018CP36114 725 aa3.57□□□□□ -1.84
RPA135YPR010C PCM1P38628 557 aaKnown RBP3.57□□□□□ -1.84
RPA135YPR010C GEM1P39722 662 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms