RNA–Protein interactions for RNA: YPL120W

VPS30, Transcript of Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II, yeast

Gene VPS30, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS30	YPL120W	RRP15	Q06511	250 aa	Predicted RBP	4.69	□□□□□ -1.66
VPS30	YPL120W	RKM4	Q12504	494 aa		4.69	□□□□□ -1.66
VPS30	YPL120W	RTC1	Q08281	1341 aa		4.69	□□□□□ -1.66
VPS30	YPL120W	YKL107W	P34251	309 aa		4.68	□□□□□ -1.66
VPS30	YPL120W	PAF1	P38351	445 aa		4.68	□□□□□ -1.66
VPS30	YPL120W	CHA4	P43634	648 aa		4.68	□□□□□ -1.66
VPS30	YPL120W	YGL176C	P46945	554 aa		4.68	□□□□□ -1.66
VPS30	YPL120W	YPL066W	Q12194	479 aa		4.68	□□□□□ -1.66
VPS30	YPL120W	GRX6	Q12438	231 aa		4.68	□□□□□ -1.66
VPS30	YPL120W	HRR25	P29295	494 aa	Known RBP	4.67	□□□□□ -1.66
VPS30	YPL120W	PAH1	P32567	862 aa		4.67	□□□□□ -1.66
VPS30	YPL120W	PET112	P33893	541 aa		4.67	□□□□□ -1.66
VPS30	YPL120W	EXG2	P52911	562 aa		4.67	□□□□□ -1.66
VPS30	YPL120W	RRT6	P53117	311 aa	Predicted RBP	4.67	□□□□□ -1.66
VPS30	YPL120W	SRP101	P32916	621 aa		4.67	□□□□□ -1.66
VPS30	YPL120W	DUT1	P33317	147 aa		4.67	□□□□□ -1.66
VPS30	YPL120W	PSP2	P50109	593 aa	Known RBP	4.67	□□□□□ -1.66
VPS30	YPL120W	EEB1	Q02891	456 aa		4.67	□□□□□ -1.66
VPS30	YPL120W	TAF8	Q03750	510 aa		4.67	□□□□□ -1.66
VPS30	YPL120W	KCS1	Q12494	1050 aa		4.67	□□□□□ -1.66
VPS30	YPL120W	FAS2	P19097	1887 aa	Known RBP	4.66	□□□□□ -1.66
VPS30	YPL120W	SPE1	P08432	466 aa		4.66	□□□□□ -1.66
VPS30	YPL120W	CDC34	P14682	295 aa		4.66	□□□□□ -1.66
VPS30	YPL120W	HEM3	P28789	327 aa		4.66	□□□□□ -1.66
VPS30	YPL120W	YPT53	P36019	220 aa		4.66	□□□□□ -1.66
VPS30	YPL120W	CCC2	P38995	1004 aa		4.66	□□□□□ -1.66
VPS30	YPL120W	SPO20	Q04359	397 aa		4.66	□□□□□ -1.66
VPS30	YPL120W	MDM38	Q08179	573 aa		4.66	□□□□□ -1.66
VPS30	YPL120W	OYE2	Q03558	400 aa	Known RBP	4.65	□□□□□ -1.66
VPS30	YPL120W	CDA1	Q06702	301 aa		4.65	□□□□□ -1.66
VPS30	YPL120W	CTI6	Q08923	506 aa		4.65	□□□□□ -1.66
VPS30	YPL120W	CUP1-1	P0CX80	61 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	CUP1-2	P0CX81	61 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	HRQ1	Q05549	1077 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	YLR225C	Q05948	407 aa	Known RBP	4.64	□□□□□ -1.67
VPS30	YPL120W	PPM2	Q08282	695 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	YLL058W	Q12198	575 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	RPS24A	P0CX31	135 aa	Known RBP	4.64	□□□□□ -1.67
VPS30	YPL120W	RPS24B	P0CX32	135 aa	Known RBP	4.64	□□□□□ -1.67
VPS30	YPL120W	HSF1	P10961	833 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	YKL151C	P36059	337 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	ECM21	P38167	1117 aa	Known RBP	4.64	□□□□□ -1.67
VPS30	YPL120W	SNF7	P39929	240 aa	Known RBP	4.64	□□□□□ -1.67
VPS30	YPL120W	SAH1	P39954	449 aa	Known RBP	4.64	□□□□□ -1.67
VPS30	YPL120W	YGR117C	P53270	476 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	SRT1	Q03175	343 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	RBA50	Q04418	439 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	IRC3	Q06683	689 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	NPC2	Q12408	173 aa		4.64	□□□□□ -1.67
VPS30	YPL120W	ASF1	P32447	279 aa		4.63	□□□□□ -1.67
VPS30	YPL120W	FUN30	P31380	1131 aa		4.62	□□□□□ -1.67
VPS30	YPL120W	OAR1	P35731	278 aa		4.62	□□□□□ -1.67
VPS30	YPL120W	MOH1	P38191	138 aa		4.62	□□□□□ -1.67
VPS30	YPL120W	UBA2	P52488	636 aa		4.62	□□□□□ -1.67
VPS30	YPL120W	YML020W	Q03722	664 aa		4.62	□□□□□ -1.67
VPS30	YPL120W	LEU2	P04173	364 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS30	YPL120W	GIC1	P38785	314 aa		4.61	□□□□□ -1.67
VPS30	YPL120W	YHR131C	P38835	850 aa		4.61	□□□□□ -1.67
VPS30	YPL120W	ENB1	Q08299	606 aa		4.61	□□□□□ -1.67
VPS30	YPL120W	TOR2	P32600	2474 aa	Known RBP	4.61	□□□□□ -1.67
VPS30	YPL120W	CAD1	P24813	409 aa	Known RBP	4.61	□□□□□ -1.67
VPS30	YPL120W	ATG19	P35193	415 aa		4.61	□□□□□ -1.67
VPS30	YPL120W	LPD1	P09624	499 aa	Known RBP	4.6	□□□□□ -1.67
VPS30	YPL120W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
VPS30	YPL120W	MNR2	P35724	969 aa		4.6	□□□□□ -1.67
VPS30	YPL120W	YFL040W	P43562	540 aa		4.6	□□□□□ -1.67
VPS30	YPL120W	TRM44	Q02648	567 aa	Known RBP	4.6	□□□□□ -1.67
VPS30	YPL120W	YML122C	Q03207	126 aa		4.6	□□□□□ -1.67
VPS30	YPL120W	WHI4	Q07655	649 aa	Known RBP	4.6	□□□□□ -1.67
VPS30	YPL120W	OSM1	P21375	501 aa	Known RBP	4.59	□□□□□ -1.67
VPS30	YPL120W	EFT1	P32324	842 aa	Known RBP	4.59	□□□□□ -1.67
VPS30	YPL120W	ESC2	Q06340	456 aa		4.59	□□□□□ -1.67
VPS30	YPL120W	YDR034W-B	Q6Q5X2	51 aa		4.59	□□□□□ -1.67
VPS30	YPL120W	KAR4	P25583	335 aa		4.58	□□□□□ -1.68
VPS30	YPL120W	SUL1	P38359	859 aa		4.58	□□□□□ -1.68
VPS30	YPL120W	PSF2	P40359	213 aa		4.58	□□□□□ -1.68
VPS30	YPL120W	URM1	P40554	99 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS30	YPL120W	SRP1	Q02821	542 aa	Known RBP	4.58	□□□□□ -1.68
VPS30	YPL120W	BDF2	Q07442	638 aa		4.58	□□□□□ -1.68
VPS30	YPL120W	AHC1	Q12433	566 aa		4.58	□□□□□ -1.68
VPS30	YPL120W	GSC2	P40989	1895 aa		4.58	□□□□□ -1.68
VPS30	YPL120W	HPR1	P17629	752 aa	Known RBP	4.57	□□□□□ -1.68
VPS30	YPL120W	SFB2	P53953	876 aa		4.57	□□□□□ -1.68
VPS30	YPL120W	ECM30	Q06673	1274 aa		4.57	□□□□□ -1.68
VPS30	YPL120W	DIB1	Q06819	143 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS30	YPL120W	LAS17	Q12446	633 aa		4.57	□□□□□ -1.68
VPS30	YPL120W	LYS2	P07702	1392 aa		4.57	□□□□□ -1.68
VPS30	YPL120W	ABD1	P32783	436 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS30	YPL120W	YBP2	P53169	641 aa		4.57	□□□□□ -1.68
VPS30	YPL120W	YPR196W	Q06595	470 aa		4.57	□□□□□ -1.68
VPS30	YPL120W	YLR040C	Q07988	224 aa		4.57	□□□□□ -1.68
VPS30	YPL120W	YOL073C	Q08232	322 aa		4.57	□□□□□ -1.68
VPS30	YPL120W	NPP2	P39997	493 aa		4.56	□□□□□ -1.68
VPS30	YPL120W	KRI1	P42846	591 aa	Known RBP	4.56	□□□□□ -1.68
VPS30	YPL120W	GUP2	Q08929	609 aa		4.56	□□□□□ -1.68
VPS30	YPL120W	ESL2	P36168	1195 aa		4.55	□□□□□ -1.68
VPS30	YPL120W	FAA4	P47912	694 aa	Known RBP	4.55	□□□□□ -1.68
VPS30	YPL120W	VPS4	P52917	437 aa		4.55	□□□□□ -1.68
VPS30	YPL120W	YGR053C	P53234	283 aa		4.55	□□□□□ -1.68
VPS30	YPL120W	CRF1	Q04930	467 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms