RNA–Protein interactions for RNA: YPL119C

DBP1, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP1, Length 1,854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP1	YPL119C	LCP5	P40079	357 aa	Predicted RBP	10.2	□□□□□ -0.78
DBP1	YPL119C	RAD26	P40352	1085 aa		10.2	□□□□□ -0.78
DBP1	YPL119C	SFH1	Q06168	426 aa		10.2	□□□□□ -0.78
DBP1	YPL119C	OMS1	Q06668	471 aa		10.2	□□□□□ -0.78
DBP1	YPL119C	VMA1	P17255	1071 aa	Known RBP	10.19	□□□□□ -0.78
DBP1	YPL119C	IRE1	P32361	1115 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	TFC4	P33339	1025 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	DBP7	P36120	742 aa	Known RBP	10.19	□□□□□ -0.78
DBP1	YPL119C	MRX3	P38172	270 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	RRT2	P38332	387 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	RCK2	P38623	610 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	TDA3	P38758	523 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	ATG36	P46983	293 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	VPS70	P47161	811 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	ORC5	P50874	479 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	JIP4	Q03361	876 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	YMR321C	Q04898	105 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	YDR278C	Q05612	105 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	AIM41	Q12032	185 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	TOM1	Q03280	3268 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	YLR462W	O13556	202 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	MSH1	P25846	959 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	GDT1	P38301	280 aa	Predicted RBP	10.19	□□□□□ -0.78
DBP1	YPL119C	YHL049C	P38722	271 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	YEL075C	P39972	122 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	YER189W	P40104	122 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	YFL064C	P43540	174 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	CPR7	P47103	393 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	YNL146W	P53906	100 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	MSC6	Q08818	692 aa	Known RBP	10.19	□□□□□ -0.78
DBP1	YPL119C	YLL058W	Q12198	575 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	YBL111C	Q3E7Y5	667 aa		10.19	□□□□□ -0.78
DBP1	YPL119C	SWI3	P32591	825 aa		10.18	□□□□□ -0.78
DBP1	YPL119C	NCL1	P38205	684 aa	Known RBP	10.18	□□□□□ -0.78
DBP1	YPL119C	SPP381	P38282	291 aa	Predicted RBP	10.18	□□□□□ -0.78
DBP1	YPL119C	NPP2	P39997	493 aa		10.18	□□□□□ -0.78
DBP1	YPL119C	ACF4	P47129	309 aa		10.18	□□□□□ -0.78
DBP1	YPL119C	IWR1	Q07532	353 aa	Predicted RBP	10.18	□□□□□ -0.78
DBP1	YPL119C	VMA4	P22203	233 aa	Known RBP	10.17	□□□□□ -0.78
DBP1	YPL119C	UBC6	P33296	250 aa	Predicted RBP	10.17	□□□□□ -0.78
DBP1	YPL119C	ASN1	P49089	572 aa	Known RBP	10.17	□□□□□ -0.78
DBP1	YPL119C	MDR1	P53258	950 aa		10.17	□□□□□ -0.78
DBP1	YPL119C	SEC21	P32074	935 aa	Known RBP	10.17	□□□□□ -0.78
DBP1	YPL119C	SPC72	P39723	622 aa		10.17	□□□□□ -0.78
DBP1	YPL119C	PSP2	P50109	593 aa	Known RBP	10.17	□□□□□ -0.78
DBP1	YPL119C	ENV11	P53246	860 aa		10.17	□□□□□ -0.78
DBP1	YPL119C	YOR223W	Q12015	292 aa		10.17	□□□□□ -0.78
DBP1	YPL119C	QCR6	P00127	147 aa		10.16	□□□□□ -0.78
DBP1	YPL119C	SLD2	P34252	453 aa		10.16	□□□□□ -0.78
DBP1	YPL119C	YTA12	P40341	825 aa		10.16	□□□□□ -0.78
DBP1	YPL119C	YNL320W	P42840	284 aa		10.16	□□□□□ -0.78
DBP1	YPL119C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	10.16	□□□□□ -0.78	not detected
DBP1	YPL119C	RIM8	P53179	542 aa		10.16	□□□□□ -0.78
DBP1	YPL119C	DRN1	P53255	507 aa	Known RBP	10.16	□□□□□ -0.78
DBP1	YPL119C	RPA49	Q01080	415 aa	Predicted RBP	10.16	□□□□□ -0.78
DBP1	YPL119C	YUR1	P26725	428 aa		10.15	□□□□□ -0.78
DBP1	YPL119C	DEP1	P31385	405 aa		10.15	□□□□□ -0.78
DBP1	YPL119C	CSG2	P35206	410 aa		10.15	□□□□□ -0.78
DBP1	YPL119C	VID24	P38263	362 aa		10.15	□□□□□ -0.78
DBP1	YPL119C	SBE2	P42223	864 aa	Known RBP	10.15	□□□□□ -0.78
DBP1	YPL119C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	10.15	□□□□□ -0.78	not detected
DBP1	YPL119C	YGR111W	P53265	400 aa		10.15	□□□□□ -0.78
DBP1	YPL119C	MRS2	Q01926	470 aa		10.15	□□□□□ -0.78
DBP1	YPL119C	RNT1	Q02555	471 aa		10.15	□□□□□ -0.78
DBP1	YPL119C	STE23	Q06010	1027 aa		10.15	□□□□□ -0.78
DBP1	YPL119C	TRM11	Q12463	433 aa		10.15	□□□□□ -0.78
DBP1	YPL119C	PRP9	P19736	530 aa	Known RBP	10.15	□□□□□ -0.79
DBP1	YPL119C	DBF4	P32325	704 aa		10.15	□□□□□ -0.79
DBP1	YPL119C	GYP6	P32806	458 aa		10.15	□□□□□ -0.79
DBP1	YPL119C	NMD5	P46970	1048 aa		10.15	□□□□□ -0.79
DBP1	YPL119C	YJR079W	P47126	109 aa		10.15	□□□□□ -0.79
DBP1	YPL119C	CUL3	P53202	744 aa		10.15	□□□□□ -0.79
DBP1	YPL119C	EEB1	Q02891	456 aa		10.15	□□□□□ -0.79
DBP1	YPL119C	STE20	Q03497	939 aa	Known RBP	10.15	□□□□□ -0.79
DBP1	YPL119C	RIO1	Q12196	484 aa	Known RBP	10.15	□□□□□ -0.79
DBP1	YPL119C	CDC42	P19073	191 aa		10.14	□□□□□ -0.79
DBP1	YPL119C	EFT1	P32324	842 aa	Known RBP	10.14	□□□□□ -0.79
DBP1	YPL119C	FTR1	P40088	404 aa		10.14	□□□□□ -0.79
DBP1	YPL119C	SCS3	P53012	380 aa		10.14	□□□□□ -0.79
DBP1	YPL119C	SHE10	P53075	577 aa		10.14	□□□□□ -0.79
DBP1	YPL119C	YDR222W	Q04925	415 aa		10.14	□□□□□ -0.79
DBP1	YPL119C	SHS1	Q07657	551 aa		10.14	□□□□□ -0.79
DBP1	YPL119C	RNR1	P21524	888 aa	Known RBP	10.13	□□□□□ -0.79
DBP1	YPL119C	RRT12	P25381	491 aa		10.13	□□□□□ -0.79
DBP1	YPL119C	GCD6	P32501	712 aa	Known RBP	10.13	□□□□□ -0.79
DBP1	YPL119C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	10.13	□□□□□ -0.79	not detected
DBP1	YPL119C	SAK1	P38990	1142 aa		10.13	□□□□□ -0.79
DBP1	YPL119C	CCT2	P39076	527 aa	Known RBP	10.13	□□□□□ -0.79
DBP1	YPL119C	YGL140C	P53120	1219 aa		10.13	□□□□□ -0.79
DBP1	YPL119C	YMR187C	Q03236	431 aa		10.13	□□□□□ -0.79
DBP1	YPL119C	TRS130	Q03660	1102 aa		10.13	□□□□□ -0.79
DBP1	YPL119C	PPM1	Q04081	328 aa		10.13	□□□□□ -0.79
DBP1	YPL119C	TDA9	Q04545	1251 aa		10.13	□□□□□ -0.79
DBP1	YPL119C	ECM29	P38737	1868 aa		10.13	□□□□□ -0.79
DBP1	YPL119C	ARG4	P04076	463 aa	Predicted RBP	10.13	□□□□□ -0.79
DBP1	YPL119C	CLB1	P24868	471 aa		10.13	□□□□□ -0.79
DBP1	YPL119C	TIF5	P38431	405 aa	Known RBP	10.13	□□□□□ -0.79
DBP1	YPL119C	UTP6	Q02354	440 aa	Known RBP	10.13	□□□□□ -0.79
DBP1	YPL119C	ABP140	Q08641	628 aa	Known RBP	10.13	□□□□□ -0.79
DBP1	YPL119C	TYW1	Q08960	810 aa	Known RBP	10.13	□□□□□ -0.79

Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms