RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	SPE1	P08432	466 aa		5.25	□□□□□ -1.57
YTM1	YOR272W	PRP6	P19735	899 aa	Predicted RBP	5.25	□□□□□ -1.57
YTM1	YOR272W	SPC29	P33419	253 aa		5.25	□□□□□ -1.57
YTM1	YOR272W	GYP8	P43570	497 aa		5.25	□□□□□ -1.57
YTM1	YOR272W	SPT20	P50875	604 aa		5.25	□□□□□ -1.57
YTM1	YOR272W	MAL11	P53048	616 aa		5.25	□□□□□ -1.57
YTM1	YOR272W	ATP25	Q03153	612 aa		5.25	□□□□□ -1.57
YTM1	YOR272W	REH1	Q06709	432 aa		5.25	□□□□□ -1.57
YTM1	YOR272W	ACK1	Q07622	623 aa	Predicted RBP	5.25	□□□□□ -1.57
YTM1	YOR272W	MDM12	Q92328	271 aa		5.25	□□□□□ -1.57
YTM1	YOR272W	NUP159	P40477	1460 aa		5.24	□□□□□ -1.57
YTM1	YOR272W	VTH1	P40438	1549 aa		5.24	□□□□□ -1.57
YTM1	YOR272W	VTH2	P40890	1549 aa		5.24	□□□□□ -1.57
YTM1	YOR272W	RPS9A	O13516	197 aa	Known RBP	5.24	□□□□□ -1.57
YTM1	YOR272W	GSY1	P23337	708 aa		5.24	□□□□□ -1.57
YTM1	YOR272W	RNQ1	P25367	405 aa		5.24	□□□□□ -1.57
YTM1	YOR272W	URA1	P28272	314 aa	Predicted RBP	5.24	□□□□□ -1.57
YTM1	YOR272W	TYE7	P33122	291 aa	Predicted RBP	5.24	□□□□□ -1.57
YTM1	YOR272W	CEP3	P40969	608 aa		5.24	□□□□□ -1.57
YTM1	YOR272W	VPS62	P53285	467 aa		5.24	□□□□□ -1.57
YTM1	YOR272W	NOP12	Q08208	459 aa	Known RBP	5.24	□□□□□ -1.57
YTM1	YOR272W	HMI1	Q12039	706 aa		5.24	□□□□□ -1.57
YTM1	YOR272W	VPS15	P22219	1454 aa		5.23	□□□□□ -1.57
YTM1	YOR272W	HIS5	P07172	385 aa		5.23	□□□□□ -1.57
YTM1	YOR272W	CDC6	P09119	513 aa		5.23	□□□□□ -1.57
YTM1	YOR272W	PEX6	P33760	1030 aa		5.23	□□□□□ -1.57
YTM1	YOR272W	GCV2	P49095	1034 aa		5.23	□□□□□ -1.57
YTM1	YOR272W	HDA1	P53973	706 aa		5.23	□□□□□ -1.57
YTM1	YOR272W	YKR011C	Q02209	353 aa		5.23	□□□□□ -1.57
YTM1	YOR272W	UTP14	Q04500	899 aa	Known RBP	5.23	□□□□□ -1.57
YTM1	YOR272W	EMC1	P25574	760 aa		5.22	□□□□□ -1.57
YTM1	YOR272W	CDC20	P26309	610 aa		5.22	□□□□□ -1.57
YTM1	YOR272W	URM1	P40554	99 aa	Predicted RBP	5.22	□□□□□ -1.57
YTM1	YOR272W	CHA4	P43634	648 aa		5.22	□□□□□ -1.57
YTM1	YOR272W	DOS2	P54858	310 aa		5.22	□□□□□ -1.57
YTM1	YOR272W	MET7	Q08645	548 aa		5.22	□□□□□ -1.57
YTM1	YOR272W	TSC11	P40061	1430 aa		5.22	□□□□□ -1.57
YTM1	YOR272W	MYO4	P32492	1471 aa		5.22	□□□□□ -1.57
YTM1	YOR272W	DAL7	P21826	554 aa		5.21	□□□□□ -1.58
YTM1	YOR272W	CYS3	P31373	394 aa	Known RBP	5.21	□□□□□ -1.58
YTM1	YOR272W	TOD6	P34219	525 aa		5.21	□□□□□ -1.58
YTM1	YOR272W	FPR3	P38911	411 aa	Known RBP	5.21	□□□□□ -1.58
YTM1	YOR272W	YIL108W	P40483	696 aa	Known RBP	5.21	□□□□□ -1.58
YTM1	YOR272W	YLR358C	O13565	187 aa		5.2	□□□□□ -1.58
YTM1	YOR272W	FBP1	P09201	348 aa		5.2	□□□□□ -1.58
YTM1	YOR272W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
YTM1	YOR272W	MNN1	P39106	762 aa		5.2	□□□□□ -1.58
YTM1	YOR272W	DSS1	P39112	969 aa		5.2	□□□□□ -1.58
YTM1	YOR272W	ZDS1	P50111	915 aa	Known RBP	5.2	□□□□□ -1.58
YTM1	YOR272W	TAD1	P53065	400 aa		5.2	□□□□□ -1.58
YTM1	YOR272W	PUS2	P53167	370 aa		5.2	□□□□□ -1.58
YTM1	YOR272W	YAP6	Q03935	383 aa		5.2	□□□□□ -1.58
YTM1	YOR272W	SSL1	Q04673	461 aa	Predicted RBP	5.2	□□□□□ -1.58
YTM1	YOR272W	RSC3	Q06639	885 aa		5.2	□□□□□ -1.58
YTM1	YOR272W	RPD3	P32561	433 aa		5.19	□□□□□ -1.58
YTM1	YOR272W	MTC2	P34246	357 aa		5.19	□□□□□ -1.58
YTM1	YOR272W	THI80	P35202	319 aa		5.19	□□□□□ -1.58
YTM1	YOR272W	BRN1	P38170	754 aa		5.19	□□□□□ -1.58
YTM1	YOR272W	UBP5	P39944	805 aa		5.19	□□□□□ -1.58
YTM1	YOR272W	YLR224W	Q05947	369 aa		5.19	□□□□□ -1.58
YTM1	YOR272W	NTG2	Q08214	380 aa		5.19	□□□□□ -1.58
YTM1	YOR272W	IRC20	Q06554	1556 aa		5.19	□□□□□ -1.58
YTM1	YOR272W	DRS2	P39524	1355 aa		5.18	□□□□□ -1.58
YTM1	YOR272W	SED4	P25365	1065 aa		5.18	□□□□□ -1.58
YTM1	YOR272W	VBA3	P25594	458 aa		5.18	□□□□□ -1.58
YTM1	YOR272W	STO1	P34160	861 aa	Known RBP	5.18	□□□□□ -1.58
YTM1	YOR272W	SAP190	P36123	1033 aa		5.18	□□□□□ -1.58
YTM1	YOR272W	WHI4	Q07655	649 aa	Known RBP	5.18	□□□□□ -1.58
YTM1	YOR272W	UPC2	Q12151	913 aa		5.18	□□□□□ -1.58
YTM1	YOR272W	NOP14	Q99207	810 aa	Known RBP	5.18	□□□□□ -1.58
YTM1	YOR272W	PRC1	P00729	532 aa		5.17	□□□□□ -1.58
YTM1	YOR272W	CDC9	P04819	755 aa		5.17	□□□□□ -1.58
YTM1	YOR272W	SDP1	P40479	209 aa		5.17	□□□□□ -1.58
YTM1	YOR272W	RLP7	P40693	322 aa	Known RBP	5.17	□□□□□ -1.58
YTM1	YOR272W	CAF16	P43569	289 aa		5.17	□□□□□ -1.58
YTM1	YOR272W	TY4A-J	P47023	414 aa		5.17	□□□□□ -1.58
YTM1	YOR272W	NCS6	P53088	359 aa		5.17	□□□□□ -1.58
YTM1	YOR272W	LRS4	Q04087	347 aa	Known RBP	5.17	□□□□□ -1.58
YTM1	YOR272W	SPO14	P36126	1683 aa		5.17	□□□□□ -1.58
YTM1	YOR272W	MLP2	P40457	1679 aa		5.17	□□□□□ -1.58
YTM1	YOR272W	SNQ2	P32568	1501 aa	Known RBP	5.17	□□□□□ -1.58
YTM1	YOR272W	MMS1	Q06211	1407 aa		5.17	□□□□□ -1.58
YTM1	YOR272W	MEF1	P25039	761 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	YCL002C	P25565	263 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	PER1	P25625	357 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	SFP1	P32432	683 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	CTF8	P38877	133 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	SET5	P38890	526 aa	Known RBP	5.16	□□□□□ -1.58
YTM1	YOR272W	PLB1	P39105	664 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	SHR5	P41912	237 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	NUP170	P38181	1502 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	DIF1	O13577	133 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	STE11	P23561	717 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	YEL1	P34225	687 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	SPC42	P36094	363 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	ALY2	P47029	1046 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	GUP2	Q08929	609 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	HAL9	Q12180	1030 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	YOR022C	Q12204	715 aa		5.16	□□□□□ -1.58
YTM1	YOR272W	YBR182C-A	Q8TGU6	64 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms