RNA–Protein interactions for RNA: YOR056C

NOB1, Transcript of Protein involved in proteasomal and 40S ribosomal subunit biogenesis, yeast

Gene NOB1, Length 1,380 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOB1	YOR056C	TKL1	P23254	680 aa	Known RBP	6.15	□□□□□ -1.43
NOB1	YOR056C	MCM4	P30665	933 aa	Known RBP	6.15	□□□□□ -1.43
NOB1	YOR056C	LIP5	P32875	414 aa		6.15	□□□□□ -1.43
NOB1	YOR056C	REG2	P38232	338 aa		6.15	□□□□□ -1.43
NOB1	YOR056C	PES4	P39684	611 aa		6.15	□□□□□ -1.43
NOB1	YOR056C	RPT6	Q01939	405 aa	Known RBP	6.15	□□□□□ -1.43
NOB1	YOR056C	YMR321C	Q04898	105 aa		6.15	□□□□□ -1.43
NOB1	YOR056C	BRE4	Q07660	1125 aa		6.15	□□□□□ -1.43
NOB1	YOR056C	RIM20	Q12033	661 aa		6.15	□□□□□ -1.43
NOB1	YOR056C	TRM11	Q12463	433 aa		6.15	□□□□□ -1.43
NOB1	YOR056C	RTP1	Q12751	981 aa		6.15	□□□□□ -1.43
NOB1	YOR056C	GCD6	P32501	712 aa	Known RBP	6.14	□□□□□ -1.43
NOB1	YOR056C	TFC4	P33339	1025 aa		6.14	□□□□□ -1.43
NOB1	YOR056C	YKL077W	P36081	392 aa		6.14	□□□□□ -1.43
NOB1	YOR056C	DBP7	P36120	742 aa	Known RBP	6.14	□□□□□ -1.43
NOB1	YOR056C	EXO5	P38289	585 aa		6.14	□□□□□ -1.43
NOB1	YOR056C	MMM1	P41800	426 aa		6.14	□□□□□ -1.43
NOB1	YOR056C	DAK2	P43550	591 aa		6.14	□□□□□ -1.43
NOB1	YOR056C	VPS72	Q03388	795 aa		6.14	□□□□□ -1.43
NOB1	YOR056C	SSF2	Q12153	453 aa	Predicted RBP	6.14	□□□□□ -1.43
NOB1	YOR056C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.13	□□□□□ -1.43	not detected
NOB1	YOR056C	UGA4	P32837	571 aa		6.13	□□□□□ -1.43
NOB1	YOR056C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	6.13	□□□□□ -1.43	not detected
NOB1	YOR056C	ARL1	P38116	183 aa	Known RBP	6.13	□□□□□ -1.43
NOB1	YOR056C	FLR1	P38124	548 aa		6.13	□□□□□ -1.43
NOB1	YOR056C	CSM2	P40465	213 aa		6.13	□□□□□ -1.43
NOB1	YOR056C	CTR1	P49573	406 aa		6.13	□□□□□ -1.43
NOB1	YOR056C	LSB1	P53281	241 aa		6.13	□□□□□ -1.43
NOB1	YOR056C	MAG2	Q06436	670 aa	Known RBP	6.13	□□□□□ -1.43
NOB1	YOR056C	SPN1	Q06505	410 aa	Predicted RBP	6.13	□□□□□ -1.43
NOB1	YOR056C	VAS1	P07806	1104 aa	Known RBP	6.12	□□□□□ -1.43
NOB1	YOR056C	HEM1	P09950	548 aa	Predicted RBP	6.12	□□□□□ -1.43
NOB1	YOR056C	MAS2	P11914	482 aa		6.12	□□□□□ -1.43
NOB1	YOR056C	SRP54	P20424	541 aa	Known RBP	6.12	□□□□□ -1.43
NOB1	YOR056C	MAK31	P23059	88 aa		6.12	□□□□□ -1.43
NOB1	YOR056C	RER2	P35196	286 aa		6.12	□□□□□ -1.43
NOB1	YOR056C	SLS1	P42900	643 aa		6.12	□□□□□ -1.43
NOB1	YOR056C	FMS1	P50264	508 aa		6.12	□□□□□ -1.43
NOB1	YOR056C	YGR045C	P53229	120 aa		6.12	□□□□□ -1.43
NOB1	YOR056C	NOG1	Q02892	647 aa	Known RBP	6.12	□□□□□ -1.43
NOB1	YOR056C	DAL4	Q04895	635 aa		6.12	□□□□□ -1.43
NOB1	YOR056C	FPR4	Q06205	392 aa	Predicted RBP	6.12	□□□□□ -1.43
NOB1	YOR056C	GUD1	Q07729	489 aa		6.12	□□□□□ -1.43
NOB1	YOR056C	GCD1	P09032	578 aa	Predicted RBP	6.11	□□□□□ -1.43
NOB1	YOR056C	RPS4A	P0CX35	261 aa	Known RBP	6.11	□□□□□ -1.43
NOB1	YOR056C	RPS4B	P0CX36	261 aa	Known RBP	6.11	□□□□□ -1.43
NOB1	YOR056C	SEC20	P28791	383 aa		6.11	□□□□□ -1.43
NOB1	YOR056C	IMP2'	P32351	346 aa		6.11	□□□□□ -1.43
NOB1	YOR056C	SEC8	P32855	1065 aa		6.11	□□□□□ -1.43
NOB1	YOR056C	TIM23	P32897	222 aa		6.11	□□□□□ -1.43
NOB1	YOR056C	SHU2	P38957	223 aa		6.11	□□□□□ -1.43
NOB1	YOR056C	CIT3	P43635	486 aa		6.11	□□□□□ -1.43
NOB1	YOR056C	LIF1	P53150	421 aa		6.11	□□□□□ -1.43
NOB1	YOR056C	ELA1	P53861	379 aa	Predicted RBP	6.11	□□□□□ -1.43
NOB1	YOR056C	ESF1	Q06344	628 aa	Known RBP	6.11	□□□□□ -1.43
NOB1	YOR056C	ISA1	Q07821	250 aa	Predicted RBP	6.11	□□□□□ -1.43
NOB1	YOR056C	CLF1	Q12309	687 aa	Predicted RBP	6.11	□□□□□ -1.43
NOB1	YOR056C	YDR034W-B	Q6Q5X2	51 aa		6.11	□□□□□ -1.43
NOB1	YOR056C	POT1	P27796	417 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
NOB1	YOR056C	AAP1	P37898	856 aa	Known RBP	6.1	□□□□□ -1.43
NOB1	YOR056C	NEM1	P38757	446 aa		6.1	□□□□□ -1.43
NOB1	YOR056C	CRG1	P38892	291 aa	RIP-Chip data	6.1	□□□□□ -1.43	not detected
NOB1	YOR056C	SGM1	P47166	707 aa		6.1	□□□□□ -1.43
NOB1	YOR056C	FOL2	P51601	243 aa	Known RBP	6.1	□□□□□ -1.43
NOB1	YOR056C	SDH1	Q00711	640 aa		6.1	□□□□□ -1.43
NOB1	YOR056C	MDM1	Q01846	1127 aa		6.1	□□□□□ -1.43
NOB1	YOR056C	MYO5	Q04439	1219 aa	Known RBP	6.1	□□□□□ -1.43
NOB1	YOR056C	TFC6	Q06339	672 aa		6.1	□□□□□ -1.43
NOB1	YOR056C	AVO1	Q08236	1176 aa		6.1	□□□□□ -1.43
NOB1	YOR056C	PGA3	Q12746	312 aa	Known RBP	6.1	□□□□□ -1.43
NOB1	YOR056C	CAD1	P24813	409 aa	Known RBP	6.09	□□□□□ -1.43
NOB1	YOR056C	MSH3	P25336	1018 aa		6.09	□□□□□ -1.43
NOB1	YOR056C	SEA4	P38164	1038 aa		6.09	□□□□□ -1.43
NOB1	YOR056C	RPS7B	P48164	190 aa	Known RBP	6.09	□□□□□ -1.43
NOB1	YOR056C	ALT1	P52893	592 aa		6.09	□□□□□ -1.43
NOB1	YOR056C	ECM16	Q04217	1267 aa	Known RBP	6.09	□□□□□ -1.43
NOB1	YOR056C	YLL058W	Q12198	575 aa		6.09	□□□□□ -1.43
NOB1	YOR056C	SNA3	P14359	133 aa		6.08	□□□□□ -1.44
NOB1	YOR056C	RPL8A	P17076	256 aa	Known RBP	6.08	□□□□□ -1.44
NOB1	YOR056C	PWP2	P25635	923 aa	Known RBP	6.08	□□□□□ -1.44
NOB1	YOR056C	JHD1	P40034	492 aa		6.08	□□□□□ -1.44
NOB1	YOR056C	AZR1	P50080	613 aa		6.08	□□□□□ -1.44
NOB1	YOR056C	PEX13	P80667	386 aa		6.08	□□□□□ -1.44
NOB1	YOR056C	PTA1	Q01329	785 aa	Predicted RBP	6.08	□□□□□ -1.44
NOB1	YOR056C	MSC2	Q03455	724 aa		6.08	□□□□□ -1.44
NOB1	YOR056C	VIP1	Q06685	1146 aa	Known RBP	6.08	□□□□□ -1.44
NOB1	YOR056C	OXR1	Q08952	273 aa		6.08	□□□□□ -1.44
NOB1	YOR056C	ATG11	Q12527	1178 aa		6.08	□□□□□ -1.44
NOB1	YOR056C	YOR111W	Q99210	232 aa		6.08	□□□□□ -1.44
NOB1	YOR056C	RAD50	P12753	1312 aa		6.08	□□□□□ -1.44
NOB1	YOR056C	TY1B-A	O13527	1196 aa	Known RBP	6.07	□□□□□ -1.44
NOB1	YOR056C	NFS1	P25374	497 aa		6.07	□□□□□ -1.44
NOB1	YOR056C	TPM2	P40414	161 aa		6.07	□□□□□ -1.44
NOB1	YOR056C	RSC8	P43609	557 aa	Known RBP	6.07	□□□□□ -1.44
NOB1	YOR056C	ALG2	P43636	503 aa		6.07	□□□□□ -1.44
NOB1	YOR056C	MCM6	P53091	1017 aa	Known RBP	6.07	□□□□□ -1.44
NOB1	YOR056C	EST2	Q06163	884 aa		6.07	□□□□□ -1.44
NOB1	YOR056C	YOR059C	Q08448	450 aa	Known RBP	6.07	□□□□□ -1.44
NOB1	YOR056C	UBR2	Q07963	1872 aa		6.07	□□□□□ -1.44
NOB1	YOR056C	PEP3	P27801	918 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 100.7 ms