RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C DAN4P47179 1161 aa5.66□□□□□ -1.5
RAT1YOR048C PCL10P53124 433 aa5.66□□□□□ -1.5
RAT1YOR048C YPL277CQ08989 487 aa5.66□□□□□ -1.5
RAT1YOR048C GNT1Q12096 491 aa5.66□□□□□ -1.5
RAT1YOR048C ADP1P25371 1049 aa5.65□□□□□ -1.5
RAT1YOR048C PWP2P25635 923 aaKnown RBP5.65□□□□□ -1.5
RAT1YOR048C MRF1P30775 413 aaPredicted RBP5.65□□□□□ -1.5
RAT1YOR048C PLC1P32383 869 aa5.65□□□□□ -1.5
RAT1YOR048C DPH5P32469 300 aaPredicted RBP5.65□□□□□ -1.5
RAT1YOR048C UBP11P36026 717 aa5.65□□□□□ -1.5
RAT1YOR048C TDA3P38758 523 aa5.65□□□□□ -1.5
RAT1YOR048C RPN3P40016 523 aaKnown RBP5.65□□□□□ -1.5
RAT1YOR048C MGS1P40151 587 aa5.65□□□□□ -1.5
RAT1YOR048C SUB1P54000 292 aaKnown RBP5.65□□□□□ -1.5
RAT1YOR048C RAD10P06838 210 aa5.65□□□□□ -1.51
RAT1YOR048C CDC33P07260 213 aaKnown RBP5.65□□□□□ -1.51
RAT1YOR048C SAM1P10659 382 aaKnown RBP5.65□□□□□ -1.51
RAT1YOR048C PAN5P38787 379 aa5.65□□□□□ -1.51
RAT1YOR048C INA22P40576 216 aa5.65□□□□□ -1.51
RAT1YOR048C SVF1Q05515 481 aa5.65□□□□□ -1.51
RAT1YOR048C DON1Q05610 365 aa5.65□□□□□ -1.51
RAT1YOR048C NOB1Q08444 459 aaKnown RBP5.65□□□□□ -1.51
RAT1YOR048C GRX6Q12438 231 aa5.65□□□□□ -1.51
RAT1YOR048C CAP1P28495 268 aaKnown RBP5.64□□□□□ -1.51
RAT1YOR048C BUD2P33314 1104 aa5.64□□□□□ -1.51
RAT1YOR048C ASG1P40467 964 aa5.64□□□□□ -1.51
RAT1YOR048C VPS53P47061 822 aa5.64□□□□□ -1.51
RAT1YOR048C YJR039WP47107 1121 aa5.64□□□□□ -1.51
RAT1YOR048C EAF6P47128 113 aa5.64□□□□□ -1.51
RAT1YOR048C NNF2P53253 936 aa5.64□□□□□ -1.51
RAT1YOR048C BUD22Q04347 519 aaKnown RBP5.64□□□□□ -1.51
RAT1YOR048C MED1Q12321 566 aa5.64□□□□□ -1.51
RAT1YOR048C SEC39Q12745 709 aa5.64□□□□□ -1.51
RAT1YOR048C THS1P04801 734 aaKnown RBP5.64□□□□□ -1.51
RAT1YOR048C GCD2P12754 651 aaPredicted RBP5.64□□□□□ -1.51
RAT1YOR048C MRX3P38172 270 aa5.64□□□□□ -1.51
RAT1YOR048C YMR018WQ04364 514 aa5.64□□□□□ -1.51
RAT1YOR048C RGA2Q06407 1009 aa5.64□□□□□ -1.51
RAT1YOR048C WHI4Q07655 649 aaKnown RBP5.64□□□□□ -1.51
RAT1YOR048C DBP10Q12389 995 aaKnown RBP5.64□□□□□ -1.51
RAT1YOR048C SWI6P09959 803 aa5.64□□□□□ -1.51
RAT1YOR048C SIT4P20604 311 aa5.64□□□□□ -1.51
RAT1YOR048C PWP1P21304 576 aaKnown RBP5.64□□□□□ -1.51
RAT1YOR048C VPS34P22543 875 aa5.64□□□□□ -1.51
RAT1YOR048C BLI1P35727 113 aa5.64□□□□□ -1.51
RAT1YOR048C DSF2P38213 736 aa5.64□□□□□ -1.51
RAT1YOR048C YBR032WP38223 100 aa5.64□□□□□ -1.51
RAT1YOR048C RCK2P38623 610 aa5.64□□□□□ -1.51
RAT1YOR048C YDR089WP38966 869 aa5.64□□□□□ -1.51
RAT1YOR048C YFL040WP43562 540 aa5.64□□□□□ -1.51
RAT1YOR048C TIM8P57744 87 aa5.64□□□□□ -1.51
RAT1YOR048C MAG2Q06436 670 aaKnown RBP5.64□□□□□ -1.51
RAT1YOR048C SLP1Q12232 587 aa5.64□□□□□ -1.51
RAT1YOR048C BUD31P25337 157 aaPredicted RBP5.63□□□□□ -1.51
RAT1YOR048C SNT1P25357 1226 aa5.63□□□□□ -1.51
RAT1YOR048C GFD2P25370 566 aaKnown RBP5.63□□□□□ -1.51
RAT1YOR048C AAD3P25612 363 aa5.63□□□□□ -1.51
RAT1YOR048C RAD54P32863 898 aa5.63□□□□□ -1.51
RAT1YOR048C HSM3P38348 480 aa5.63□□□□□ -1.51
RAT1YOR048C ASG7P46993 209 aa5.63□□□□□ -1.51
RAT1YOR048C LGE1Q02796 332 aaKnown RBP5.63□□□□□ -1.51
RAT1YOR048C TMA64Q04600 565 aaKnown RBP5.63□□□□□ -1.51
RAT1YOR048C TRM11Q12463 433 aa5.63□□□□□ -1.51
RAT1YOR048C MAK16P10962 306 aaPredicted RBP5.63□□□□□ -1.51
RAT1YOR048C CKA2P19454 339 aa5.63□□□□□ -1.51
RAT1YOR048C NPP1P25353 742 aa5.63□□□□□ -1.51
RAT1YOR048C PFK26P40433 827 aaKnown RBP5.63□□□□□ -1.51
RAT1YOR048C UTP22P53254 1237 aaPredicted RBP5.63□□□□□ -1.51
RAT1YOR048C RPA49Q01080 415 aaPredicted RBP5.63□□□□□ -1.51
RAT1YOR048C CUS1Q02554 436 aaPredicted RBP5.63□□□□□ -1.51
RAT1YOR048C YKU80Q04437 629 aa5.63□□□□□ -1.51
RAT1YOR048C SKG3Q06315 1026 aa5.63□□□□□ -1.51
RAT1YOR048C DIB1Q06819 143 aaPredicted RBP5.63□□□□□ -1.51
RAT1YOR048C GSC2P40989 1895 aa5.63□□□□□ -1.51
RAT1YOR048C TUS1Q06412 1307 aa5.63□□□□□ -1.51
RAT1YOR048C SPO16P17122 198 aa5.62□□□□□ -1.51
RAT1YOR048C BUD14P27637 709 aa5.62□□□□□ -1.51
RAT1YOR048C RPC19P28000 142 aaKnown RBP5.62□□□□□ -1.51
RAT1YOR048C TPS2P31688 896 aaKnown RBP5.62□□□□□ -1.51
RAT1YOR048C AXL1P40851 1208 aa5.62□□□□□ -1.51
RAT1YOR048C SAD1P43589 448 aa5.62□□□□□ -1.51
RAT1YOR048C HSH155P49955 971 aaKnown RBP5.62□□□□□ -1.51
RAT1YOR048C MTC3P53077 123 aa5.62□□□□□ -1.51
RAT1YOR048C UTP8P53276 713 aaKnown RBP5.62□□□□□ -1.51
RAT1YOR048C NCS2P53923 493 aaPredicted RBP5.62□□□□□ -1.51
RAT1YOR048C MFM1Q02783 413 aa5.62□□□□□ -1.51
RAT1YOR048C INA17Q02888 182 aa5.62□□□□□ -1.51
RAT1YOR048C ELP3Q02908 557 aaKnown RBP5.62□□□□□ -1.51
RAT1YOR048C UFO1Q04511 668 aa5.62□□□□□ -1.51
RAT1YOR048C YPR097WQ06839 1073 aa5.62□□□□□ -1.51
RAT1YOR048C CRD1Q07560 283 aa5.62□□□□□ -1.51
RAT1YOR048C ISA1Q07821 250 aaPredicted RBP5.62□□□□□ -1.51
RAT1YOR048C NOC3Q07896 663 aaPredicted RBP5.62□□□□□ -1.51
RAT1YOR048C DIA2Q08496 732 aaPredicted RBP5.62□□□□□ -1.51
RAT1YOR048C TY4A-HQ6Q5P6 413 aa5.62□□□□□ -1.51
RAT1YOR048C PMA1P05030 918 aaKnown RBP5.62□□□□□ -1.51
RAT1YOR048C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
RAT1YOR048C DBF4P32325 704 aa5.62□□□□□ -1.51
RAT1YOR048C KDX1P36005 433 aa5.62□□□□□ -1.51
RAT1YOR048C KEL1P38853 1164 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms