RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W PTC2P39966 464 aaKnown RBP4.2□□□□□ -1.74
ROD1YOR018W NUP82P40368 713 aa4.2□□□□□ -1.74
ROD1YOR018W FAR11P53917 953 aa4.2□□□□□ -1.74
ROD1YOR018W COQ9Q05779 260 aa4.2□□□□□ -1.74
ROD1YOR018W TCO89Q08921 799 aa4.2□□□□□ -1.74
ROD1YOR018W FAL1Q12099 399 aaKnown RBP4.2□□□□□ -1.74
ROD1YOR018W SPT2P06843 333 aaPredicted RBP4.19□□□□□ -1.74
ROD1YOR018W RPL4AP10664 362 aaKnown RBP4.19□□□□□ -1.74
ROD1YOR018W POX1P13711 748 aa4.19□□□□□ -1.74
ROD1YOR018W CYC8P14922 966 aa4.19□□□□□ -1.74
ROD1YOR018W IRE1P32361 1115 aa4.19□□□□□ -1.74
ROD1YOR018W TVP38P36164 337 aa4.19□□□□□ -1.74
ROD1YOR018W CTM1P38818 585 aa4.19□□□□□ -1.74
ROD1YOR018W ATG3P40344 310 aa4.19□□□□□ -1.74
ROD1YOR018W SKP2P42843 763 aa4.19□□□□□ -1.74
ROD1YOR018W ROG3P43602 733 aa4.19□□□□□ -1.74
ROD1YOR018W RPL4BP49626 362 aaKnown RBP4.19□□□□□ -1.74
ROD1YOR018W ORC5P50874 479 aa4.19□□□□□ -1.74
ROD1YOR018W ZPR1P53303 486 aaKnown RBP4.19□□□□□ -1.74
ROD1YOR018W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
ROD1YOR018W YDR278CQ05612 105 aa4.19□□□□□ -1.74
ROD1YOR018W YPL277CQ08989 487 aa4.19□□□□□ -1.74
ROD1YOR018W RPL22AP05749 121 aaKnown RBP4.19□□□□□ -1.74
ROD1YOR018W PHO13P19881 312 aa4.19□□□□□ -1.74
ROD1YOR018W PDC6P26263 563 aaKnown RBP4.19□□□□□ -1.74
ROD1YOR018W CBF2P32504 956 aa4.19□□□□□ -1.74
ROD1YOR018W PRE3P38624 215 aa4.19□□□□□ -1.74
ROD1YOR018W SEC9P40357 651 aa4.19□□□□□ -1.74
ROD1YOR018W YFL034WP43564 1073 aa4.19□□□□□ -1.74
ROD1YOR018W VPS75P53853 264 aa4.19□□□□□ -1.74
ROD1YOR018W ROD1Q02805 837 aa4.19□□□□□ -1.74
ROD1YOR018W CEF1Q03654 590 aaPredicted RBP4.19□□□□□ -1.74
ROD1YOR018W ATG9Q12142 997 aa4.19□□□□□ -1.74
ROD1YOR018W RRP6Q12149 733 aaKnown RBP4.19□□□□□ -1.74
ROD1YOR018W SUT2Q12286 268 aa4.19□□□□□ -1.74
ROD1YOR018W ATG11Q12527 1178 aa4.19□□□□□ -1.74
ROD1YOR018W FKS1P38631 1876 aaKnown RBP4.19□□□□□ -1.74
ROD1YOR018W ADE4P04046 510 aaKnown RBP4.18□□□□□ -1.74
ROD1YOR018W HAP4P14064 554 aa4.18□□□□□ -1.74
ROD1YOR018W DBP5P20449 482 aaKnown RBP4.18□□□□□ -1.74
ROD1YOR018W SEC20P28791 383 aa4.18□□□□□ -1.74
ROD1YOR018W SLD2P34252 453 aa4.18□□□□□ -1.74
ROD1YOR018W ATG19P35193 415 aa4.18□□□□□ -1.74
ROD1YOR018W EAF5P39995 279 aa4.18□□□□□ -1.74
ROD1YOR018W IES1P43579 692 aa4.18□□□□□ -1.74
ROD1YOR018W YNL146WP53906 100 aa4.18□□□□□ -1.74
ROD1YOR018W MLH2Q07980 695 aa4.18□□□□□ -1.74
ROD1YOR018W IES4Q08561 116 aa4.18□□□□□ -1.74
ROD1YOR018W YLL058WQ12198 575 aa4.18□□□□□ -1.74
ROD1YOR018W FRT1Q99332 602 aa4.18□□□□□ -1.74
ROD1YOR018W PPR1P07272 904 aaPredicted RBP4.18□□□□□ -1.74
ROD1YOR018W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
ROD1YOR018W RGT1P32862 1170 aa4.18□□□□□ -1.74
ROD1YOR018W MNN4P36044 1178 aa4.18□□□□□ -1.74
ROD1YOR018W YKR018CP36114 725 aa4.18□□□□□ -1.74
ROD1YOR018W SAP190P36123 1033 aa4.18□□□□□ -1.74
ROD1YOR018W YHR219WP38900 624 aa4.18□□□□□ -1.74
ROD1YOR018W PSF2P40359 213 aa4.18□□□□□ -1.74
ROD1YOR018W CCM1P48237 864 aaPredicted RBP4.18□□□□□ -1.74
ROD1YOR018W KXD1P53158 218 aa4.18□□□□□ -1.74
ROD1YOR018W CNM67P53865 581 aaKnown RBP4.18□□□□□ -1.74
ROD1YOR018W ULP1Q02724 621 aa4.18□□□□□ -1.74
ROD1YOR018W UTP14Q04500 899 aaKnown RBP4.18□□□□□ -1.74
ROD1YOR018W PNP1Q05788 311 aa4.18□□□□□ -1.74
ROD1YOR018W ISR1Q06098 443 aaKnown RBP4.18□□□□□ -1.74
ROD1YOR018W YOL098CQ12496 1037 aa4.18□□□□□ -1.74
ROD1YOR018W CHS2P14180 963 aa4.17□□□□□ -1.74
ROD1YOR018W SPO11P23179 398 aa4.17□□□□□ -1.74
ROD1YOR018W VFA1P40080 203 aa4.17□□□□□ -1.74
ROD1YOR018W HSH155P49955 971 aaKnown RBP4.17□□□□□ -1.74
ROD1YOR018W RTT102P53330 157 aa4.17□□□□□ -1.74
ROD1YOR018W VPS72Q03388 795 aa4.17□□□□□ -1.74
ROD1YOR018W HDA3Q06623 655 aa4.17□□□□□ -1.74
ROD1YOR018W YOR131CQ12486 218 aa4.17□□□□□ -1.74
ROD1YOR018W ECM29P38737 1868 aa4.17□□□□□ -1.74
ROD1YOR018W TY1B-AO13527 1196 aaKnown RBP4.17□□□□□ -1.74
ROD1YOR018W COX4P04037 155 aa4.17□□□□□ -1.74
ROD1YOR018W TOM70P07213 617 aaKnown RBP4.17□□□□□ -1.74
ROD1YOR018W RPC53P25441 422 aa4.17□□□□□ -1.74
ROD1YOR018W YSC83P32792 385 aa4.17□□□□□ -1.74
ROD1YOR018W SMY2P32909 740 aaKnown RBP4.17□□□□□ -1.74
ROD1YOR018W MMM1P41800 426 aa4.17□□□□□ -1.74
ROD1YOR018W ZAP1P47043 880 aa4.17□□□□□ -1.74
ROD1YOR018W STB4P50104 949 aa4.17□□□□□ -1.74
ROD1YOR018W PSP2P50109 593 aaKnown RBP4.17□□□□□ -1.74
ROD1YOR018W NCS6P53088 359 aa4.17□□□□□ -1.74
ROD1YOR018W CAF130P53280 1122 aaPredicted RBP4.17□□□□□ -1.74
ROD1YOR018W VTC3Q02725 835 aa4.17□□□□□ -1.74
ROD1YOR018W YLR287CQ05881 355 aa4.17□□□□□ -1.74
ROD1YOR018W TY3A-GQ12173 290 aa4.17□□□□□ -1.74
ROD1YOR018W TY3A-IQ99219 290 aa4.17□□□□□ -1.74
ROD1YOR018W TAF13P11747 167 aa4.16□□□□□ -1.74
ROD1YOR018W MUD1P32605 298 aaKnown RBP4.16□□□□□ -1.74
ROD1YOR018W VID24P38263 362 aa4.16□□□□□ -1.74
ROD1YOR018W YEL025CP39991 1188 aa4.16□□□□□ -1.74
ROD1YOR018W HUL5P53119 910 aa4.16□□□□□ -1.74
ROD1YOR018W MET7Q08645 548 aa4.16□□□□□ -1.74
ROD1YOR018W STB3Q12427 513 aa4.16□□□□□ -1.74
ROD1YOR018W SSB1P11484 613 aaKnown RBP4.16□□□□□ -1.74
ROD1YOR018W CAD1P24813 409 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms