RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W YEL1P34225 687 aa4.47□□□□□ -1.69
PUB1YNL016W SQT1P35184 431 aa4.47□□□□□ -1.69
PUB1YNL016W KTR4P38131 464 aa4.47□□□□□ -1.69
PUB1YNL016W SUM1P46676 1062 aa4.47□□□□□ -1.69
PUB1YNL016W RSM26P47141 266 aa4.47□□□□□ -1.69
PUB1YNL016W YGL082WP53155 381 aa4.47□□□□□ -1.69
PUB1YNL016W CTF4Q01454 927 aa4.47□□□□□ -1.69
PUB1YNL016W HEH2Q03281 663 aa4.47□□□□□ -1.69
PUB1YNL016W TOM70P07213 617 aaKnown RBP4.46□□□□□ -1.7
PUB1YNL016W HEM13P11353 328 aaKnown RBP4.46□□□□□ -1.7
PUB1YNL016W URA1P28272 314 aaPredicted RBP4.46□□□□□ -1.7
PUB1YNL016W CHS3P29465 1165 aa4.46□□□□□ -1.7
PUB1YNL016W APE4P38821 490 aa4.46□□□□□ -1.7
PUB1YNL016W ACA1P39970 489 aa4.46□□□□□ -1.7
PUB1YNL016W UBP6P43593 499 aaKnown RBP4.46□□□□□ -1.7
PUB1YNL016W PRY1P47032 299 aa4.46□□□□□ -1.7
PUB1YNL016W YJR096WP47137 282 aa4.46□□□□□ -1.7
PUB1YNL016W UBP15P50101 1230 aa4.46□□□□□ -1.7
PUB1YNL016W MET13P53128 600 aa4.46□□□□□ -1.7
PUB1YNL016W NOG1Q02892 647 aaKnown RBP4.46□□□□□ -1.7
PUB1YNL016W PMT7Q06644 662 aa4.46□□□□□ -1.7
PUB1YNL016W DIB1Q06819 143 aaPredicted RBP4.46□□□□□ -1.7
PUB1YNL016W SDH5Q08230 162 aa4.46□□□□□ -1.7
PUB1YNL016W ALE1Q08548 619 aa4.46□□□□□ -1.7
PUB1YNL016W YDR056CQ12025 205 aa4.46□□□□□ -1.7
PUB1YNL016W RKM4Q12504 494 aa4.46□□□□□ -1.7
PUB1YNL016W NHA1Q99271 985 aa4.46□□□□□ -1.7
PUB1YNL016W SPS1P08458 490 aa4.45□□□□□ -1.7
PUB1YNL016W SRD1P09007 221 aa4.45□□□□□ -1.7
PUB1YNL016W PCL2P25693 308 aa4.45□□□□□ -1.7
PUB1YNL016W MOT2P34909 587 aaKnown RBP4.45□□□□□ -1.7
PUB1YNL016W RDH54P38086 958 aa4.45□□□□□ -1.7
PUB1YNL016W YBR287WP38355 427 aa4.45□□□□□ -1.7
PUB1YNL016W BSD2P38356 321 aa4.45□□□□□ -1.7
PUB1YNL016W VTC2P43585 828 aa4.45□□□□□ -1.7
PUB1YNL016W YNL165WP53891 406 aa4.45□□□□□ -1.7
PUB1YNL016W UBP16Q02863 499 aa4.45□□□□□ -1.7
PUB1YNL016W YLR352WQ06479 807 aa4.45□□□□□ -1.7
PUB1YNL016W Q0182Q9ZZW1 134 aa4.45□□□□□ -1.7
PUB1YNL016W CDC9P04819 755 aa4.44□□□□□ -1.7
PUB1YNL016W HOM3P10869 527 aa4.44□□□□□ -1.7
PUB1YNL016W RPC31P17890 251 aa4.44□□□□□ -1.7
PUB1YNL016W RAD53P22216 821 aa4.44□□□□□ -1.7
PUB1YNL016W GIP1P38229 639 aa4.44□□□□□ -1.7
PUB1YNL016W MBP1P39678 833 aa4.44□□□□□ -1.7
PUB1YNL016W OAF1P39720 1047 aaPredicted RBP4.44□□□□□ -1.7
PUB1YNL016W TMA108P40462 946 aa4.44□□□□□ -1.7
PUB1YNL016W HIS6P40545 261 aa4.44□□□□□ -1.7
PUB1YNL016W CNN1P43618 361 aa4.44□□□□□ -1.7
PUB1YNL016W NCS6P53088 359 aa4.44□□□□□ -1.7
PUB1YNL016W NPY1P53164 384 aa4.44□□□□□ -1.7
PUB1YNL016W RSC1P53236 928 aa4.44□□□□□ -1.7
PUB1YNL016W TRM44Q02648 567 aaKnown RBP4.44□□□□□ -1.7
PUB1YNL016W TRS130Q03660 1102 aa4.44□□□□□ -1.7
PUB1YNL016W TIF35Q04067 274 aaKnown RBP4.44□□□□□ -1.7
PUB1YNL016W PHM6Q05637 104 aa4.44□□□□□ -1.7
PUB1YNL016W YOR296WQ08748 1289 aa4.44□□□□□ -1.7
PUB1YNL016W YTM1Q12024 460 aaPredicted RBP4.44□□□□□ -1.7
PUB1YNL016W YPL066WQ12194 479 aa4.44□□□□□ -1.7
PUB1YNL016W CLF1Q12309 687 aaPredicted RBP4.44□□□□□ -1.7
PUB1YNL016W YPR117WQ06116 2489 aa4.43□□□□□ -1.7
PUB1YNL016W MSS18P08593 268 aa4.43□□□□□ -1.7
PUB1YNL016W HVG1P0CE11 249 aa4.43□□□□□ -1.7
PUB1YNL016W SFL1P20134 766 aa4.43□□□□□ -1.7
PUB1YNL016W MLF3P32047 452 aa4.43□□□□□ -1.7
PUB1YNL016W PYC2P32327 1180 aaKnown RBP4.43□□□□□ -1.7
PUB1YNL016W HEM12P32347 362 aaPredicted RBP4.43□□□□□ -1.7
PUB1YNL016W SMY2P32909 740 aaKnown RBP4.43□□□□□ -1.7
PUB1YNL016W DOM34P33309 386 aa4.43□□□□□ -1.7
PUB1YNL016W YKL107WP34251 309 aa4.43□□□□□ -1.7
PUB1YNL016W NUP120P35729 1037 aa4.43□□□□□ -1.7
PUB1YNL016W YKL050CP35736 922 aa4.43□□□□□ -1.7
PUB1YNL016W ECM2P38241 364 aaKnown RBP4.43□□□□□ -1.7
PUB1YNL016W RIM11P38615 370 aa4.43□□□□□ -1.7
PUB1YNL016W PAN5P38787 379 aa4.43□□□□□ -1.7
PUB1YNL016W AIM46P38885 310 aa4.43□□□□□ -1.7
PUB1YNL016W CKB2P38930 258 aa4.43□□□□□ -1.7
PUB1YNL016W PES4P39684 611 aa4.43□□□□□ -1.7
PUB1YNL016W GZF3P42944 551 aaKnown RBP4.43□□□□□ -1.7
PUB1YNL016W IML2P47031 731 aa4.43□□□□□ -1.7
PUB1YNL016W VPS4P52917 437 aa4.43□□□□□ -1.7
PUB1YNL016W TAN1P53072 289 aaPredicted RBP4.43□□□□□ -1.7
PUB1YNL016W YGR117CP53270 476 aa4.43□□□□□ -1.7
PUB1YNL016W HOL1P53389 586 aa4.43□□□□□ -1.7
PUB1YNL016W MEP3P53390 489 aa4.43□□□□□ -1.7
PUB1YNL016W ROD1Q02805 837 aa4.43□□□□□ -1.7
PUB1YNL016W EMG1Q06287 252 aaKnown RBP4.43□□□□□ -1.7
PUB1YNL016W HKR1P41809 1802 aa4.42□□□□□ -1.7
PUB1YNL016W MSD1P15179 658 aaKnown RBP4.42□□□□□ -1.7
PUB1YNL016W TPM1P17536 199 aaKnown RBP4.42□□□□□ -1.7
PUB1YNL016W PRP19P32523 503 aaKnown RBP4.42□□□□□ -1.7
PUB1YNL016W FRD1P32614 470 aaKnown RBP4.42□□□□□ -1.7
PUB1YNL016W ANP1P32629 500 aa4.42□□□□□ -1.7
PUB1YNL016W KAP122P32767 1081 aa4.42□□□□□ -1.7
PUB1YNL016W PEX5P35056 612 aa4.42□□□□□ -1.7
PUB1YNL016W PET10P36139 283 aa4.42□□□□□ -1.7
PUB1YNL016W STV1P37296 890 aa4.42□□□□□ -1.7
PUB1YNL016W NOP4P37838 685 aaKnown RBP4.42□□□□□ -1.7
PUB1YNL016W AKL1P38080 1108 aaKnown RBP4.42□□□□□ -1.7
PUB1YNL016W VPS8P39702 1274 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms