RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W CYS3P31373 394 aaKnown RBP8.31□□□□□ -1.08
NUP53YMR153W HMT1P38074 348 aa8.31□□□□□ -1.08
NUP53YMR153W SIP5P40210 489 aaKnown RBP8.31□□□□□ -1.08
NUP53YMR153W HST1P53685 503 aa8.31□□□□□ -1.08
NUP53YMR153W STP1Q00947 519 aa8.31□□□□□ -1.08
NUP53YMR153W SGO1Q08490 590 aa8.31□□□□□ -1.08
NUP53YMR153W TCO89Q08921 799 aa8.31□□□□□ -1.08
NUP53YMR153W CTF3Q12748 733 aa8.31□□□□□ -1.08
NUP53YMR153W CHS2P14180 963 aa8.3□□□□□ -1.08
NUP53YMR153W OM45P16547 393 aa8.3□□□□□ -1.08
NUP53YMR153W PPZ1P26570 692 aa8.3□□□□□ -1.08
NUP53YMR153W VPH1P32563 840 aaKnown RBP8.3□□□□□ -1.08
NUP53YMR153W YKT6P36015 200 aaKnown RBP8.3□□□□□ -1.08
NUP53YMR153W TBS1P38114 1094 aa8.3□□□□□ -1.08
NUP53YMR153W YHR054CP38780 354 aa8.3□□□□□ -1.08
NUP53YMR153W BDH2P39713 417 aa8.3□□□□□ -1.08
NUP53YMR153W TIM8P57744 87 aa8.3□□□□□ -1.08
NUP53YMR153W CEF1Q03654 590 aaPredicted RBP8.3□□□□□ -1.08
NUP53YMR153W GAL80P04387 435 aa8.29□□□□□ -1.08
NUP53YMR153W SPE1P08432 466 aa8.29□□□□□ -1.08
NUP53YMR153W KEX2P13134 814 aa8.29□□□□□ -1.08
NUP53YMR153W APE1P14904 514 aa8.29□□□□□ -1.08
NUP53YMR153W PDE1P22434 369 aa8.29□□□□□ -1.08
NUP53YMR153W PGS1P25578 521 aa8.29□□□□□ -1.08
NUP53YMR153W IMG2P25642 146 aaPredicted RBP8.29□□□□□ -1.08
NUP53YMR153W YER130CP39959 443 aa8.29□□□□□ -1.08
NUP53YMR153W LCB2P40970 561 aa8.29□□□□□ -1.08
NUP53YMR153W DON1Q05610 365 aa8.29□□□□□ -1.08
NUP53YMR153W CDD1Q06549 142 aa8.29□□□□□ -1.08
NUP53YMR153W SGT2Q12118 346 aaKnown RBP8.29□□□□□ -1.08
NUP53YMR153W BET2P20133 325 aa8.29□□□□□ -1.08
NUP53YMR153W CCT5P40413 562 aaKnown RBP8.29□□□□□ -1.08
NUP53YMR153W YJL045WP47052 634 aa8.29□□□□□ -1.08
NUP53YMR153W LSC2P53312 427 aa8.29□□□□□ -1.08
NUP53YMR153W RRD2Q12461 358 aa8.29□□□□□ -1.08
NUP53YMR153W PTC4P38089 393 aa8.28□□□□□ -1.08
NUP53YMR153W FTR1P40088 404 aa8.28□□□□□ -1.08
NUP53YMR153W FYV8P46949 817 aaKnown RBP8.28□□□□□ -1.08
NUP53YMR153W YPT11P48559 417 aa8.28□□□□□ -1.08
NUP53YMR153W NOP13P53883 403 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
NUP53YMR153W ADA2Q02336 434 aa8.28□□□□□ -1.08
NUP53YMR153W TBF1Q02457 562 aa8.28□□□□□ -1.08
NUP53YMR153W SPP382Q06411 708 aaPredicted RBP8.28□□□□□ -1.08
NUP53YMR153W DDP1Q99321 188 aaKnown RBP8.28□□□□□ -1.08
NUP53YMR153W RPL22AP05749 121 aaKnown RBP8.27□□□□□ -1.09
NUP53YMR153W GPA1P08539 472 aa8.27□□□□□ -1.09
NUP53YMR153W NAT1P12945 854 aaKnown RBP8.27□□□□□ -1.09
NUP53YMR153W SPO11P23179 398 aa8.27□□□□□ -1.09
NUP53YMR153W PSO2P30620 661 aa8.27□□□□□ -1.09
NUP53YMR153W RGD1P38339 666 aa8.27□□□□□ -1.09
NUP53YMR153W SAF1P38352 637 aa8.27□□□□□ -1.09
NUP53YMR153W HYR1P40581 163 aaKnown RBP8.27□□□□□ -1.09
NUP53YMR153W POL31P46957 487 aa8.27□□□□□ -1.09
NUP53YMR153W TIF35Q04067 274 aaKnown RBP8.27□□□□□ -1.09
NUP53YMR153W HCR1Q05775 265 aaKnown RBP8.27□□□□□ -1.09
NUP53YMR153W RLP24Q07915 199 aaKnown RBP8.27□□□□□ -1.09
NUP53YMR153W YOL075CQ08234 1294 aa8.27□□□□□ -1.09
NUP53YMR153W APM4Q99186 491 aa8.27□□□□□ -1.09
NUP53YMR153W KEX1P09620 729 aa8.26□□□□□ -1.09
NUP53YMR153W HMG2P12684 1045 aa8.26□□□□□ -1.09
NUP53YMR153W CBF2P32504 956 aa8.26□□□□□ -1.09
NUP53YMR153W SWI3P32591 825 aa8.26□□□□□ -1.09
NUP53YMR153W COY1P34237 679 aa8.26□□□□□ -1.09
NUP53YMR153W LEO1P38439 464 aa8.26□□□□□ -1.09
NUP53YMR153W RIM4P38741 713 aa8.26□□□□□ -1.09
NUP53YMR153W UBP5P39944 805 aa8.26□□□□□ -1.09
NUP53YMR153W DAS1P47005 663 aa8.26□□□□□ -1.09
NUP53YMR153W GIR2Q03768 265 aaPredicted RBP8.26□□□□□ -1.09
NUP53YMR153W AFT2Q08957 416 aa8.26□□□□□ -1.09
NUP53YMR153W LEA1Q08963 238 aaPredicted RBP8.26□□□□□ -1.09
NUP53YMR153W SLX4Q12098 748 aa8.26□□□□□ -1.09
NUP53YMR153W LSP1Q12230 341 aaKnown RBP8.26□□□□□ -1.09
NUP53YMR153W MAK16P10962 306 aaPredicted RBP8.25□□□□□ -1.09
NUP53YMR153W IME1P21190 360 aa8.25□□□□□ -1.09
NUP53YMR153W PUP3P25451 205 aaKnown RBP8.25□□□□□ -1.09
NUP53YMR153W ELM1P32801 640 aa8.25□□□□□ -1.09
NUP53YMR153W AGP2P38090 596 aa8.25□□□□□ -1.09
NUP53YMR153W YBR284WP38150 797 aa8.25□□□□□ -1.09
NUP53YMR153W YCK3P39962 524 aa8.25□□□□□ -1.09
NUP53YMR153W TAF1P46677 1066 aa8.25□□□□□ -1.09
NUP53YMR153W SMC3P47037 1230 aa8.25□□□□□ -1.09
NUP53YMR153W ALT1P52893 592 aa8.25□□□□□ -1.09
NUP53YMR153W RGA2Q06407 1009 aa8.25□□□□□ -1.09
NUP53YMR153W IRC10Q08118 586 aa8.25□□□□□ -1.09
NUP53YMR153W APC11Q12157 165 aa8.25□□□□□ -1.09
NUP53YMR153W HRT3Q12347 344 aa8.25□□□□□ -1.09
NUP53YMR153W VPS24P36095 224 aaKnown RBP8.24□□□□□ -1.09
NUP53YMR153W NSE5Q03718 556 aa8.24□□□□□ -1.09
NUP53YMR153W IWR1Q07532 353 aaPredicted RBP8.24□□□□□ -1.09
NUP53YMR153W TAF10Q12030 206 aa8.24□□□□□ -1.09
NUP53YMR153W RAM1P22007 431 aa8.23□□□□□ -1.09
NUP53YMR153W PEX34P25584 144 aa8.23□□□□□ -1.09
NUP53YMR153W SLA2P33338 968 aa8.23□□□□□ -1.09
NUP53YMR153W YKL097CP34245 136 aa8.23□□□□□ -1.09
NUP53YMR153W SHE3P38272 425 aaKnown RBP8.23□□□□□ -1.09
NUP53YMR153W KIC1P38692 1080 aa8.23□□□□□ -1.09
NUP53YMR153W KAP123P40069 1113 aaKnown RBP8.23□□□□□ -1.09
NUP53YMR153W TGL3P40308 642 aa8.23□□□□□ -1.09
NUP53YMR153W BFA1P47113 574 aa8.23□□□□□ -1.09
NUP53YMR153W YGR237CP50089 785 aa8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms