RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C COQ4O13525 335 aa7.71□□□□□ -1.18
AFG2YLR397C CDC8P00572 216 aa7.71□□□□□ -1.18
AFG2YLR397C PIF1P07271 859 aa7.71□□□□□ -1.18
AFG2YLR397C HSF1P10961 833 aa7.71□□□□□ -1.18
AFG2YLR397C RCN1P36054 211 aa7.71□□□□□ -1.18
AFG2YLR397C GEM1P39722 662 aa7.71□□□□□ -1.18
AFG2YLR397C RTT105P40063 208 aa7.71□□□□□ -1.18
AFG2YLR397C CWC25P53854 179 aaKnown RBP7.71□□□□□ -1.18
AFG2YLR397C RPN9Q04062 393 aaKnown RBP7.71□□□□□ -1.18
AFG2YLR397C SEC10Q06245 871 aa7.71□□□□□ -1.18
AFG2YLR397C ATG29Q12092 213 aa7.71□□□□□ -1.18
AFG2YLR397C BUD3P25558 1636 aa7.71□□□□□ -1.18
AFG2YLR397C MPH2P0CD99 609 aa7.7□□□□□ -1.18
AFG2YLR397C RPS6AP0CX37 236 aaKnown RBP7.7□□□□□ -1.18
AFG2YLR397C RPS6BP0CX38 236 aaPredicted RBP7.7□□□□□ -1.18
AFG2YLR397C VPS51P36116 164 aa7.7□□□□□ -1.18
AFG2YLR397C MEF2P39677 819 aa7.7□□□□□ -1.18
AFG2YLR397C ALF1P53904 254 aa7.7□□□□□ -1.18
AFG2YLR397C HER2Q03557 464 aa7.7□□□□□ -1.18
AFG2YLR397C MDM36Q06820 579 aa7.7□□□□□ -1.18
AFG2YLR397C YPL277CQ08989 487 aa7.7□□□□□ -1.18
AFG2YLR397C APM4Q99186 491 aa7.7□□□□□ -1.18
AFG2YLR397C PYC1P11154 1178 aaKnown RBP7.7□□□□□ -1.18
AFG2YLR397C SNA3P14359 133 aa7.7□□□□□ -1.18
AFG2YLR397C YJU2P28320 278 aaPredicted RBP7.7□□□□□ -1.18
AFG2YLR397C SIN4P32259 974 aa7.7□□□□□ -1.18
AFG2YLR397C JNM1P36224 373 aa7.7□□□□□ -1.18
AFG2YLR397C YHL012WP38709 493 aa7.7□□□□□ -1.18
AFG2YLR397C IRC6P43615 237 aa7.7□□□□□ -1.18
AFG2YLR397C YJL181WP46987 611 aa7.7□□□□□ -1.18
AFG2YLR397C ATH1P48016 1211 aa7.7□□□□□ -1.18
AFG2YLR397C POB3Q04636 552 aaKnown RBP7.7□□□□□ -1.18
AFG2YLR397C MCM21Q06675 368 aa7.7□□□□□ -1.18
AFG2YLR397C YDL124WQ07551 312 aaKnown RBP7.7□□□□□ -1.18
AFG2YLR397C SGT1Q08446 395 aa7.7□□□□□ -1.18
AFG2YLR397C RSA1Q08932 381 aa7.7□□□□□ -1.18
AFG2YLR397C MED4Q12343 284 aa7.7□□□□□ -1.18
AFG2YLR397C YSP2Q06681 1438 aa7.7□□□□□ -1.18
AFG2YLR397C TEF1P02994 458 aaKnown RBP7.69□□□□□ -1.18
AFG2YLR397C LAS1P36146 502 aaPredicted RBP7.69□□□□□ -1.18
AFG2YLR397C MRPL40P36534 297 aa7.69□□□□□ -1.18
AFG2YLR397C YAP3P38749 330 aa7.69□□□□□ -1.18
AFG2YLR397C LSM12P38828 187 aaKnown RBP7.69□□□□□ -1.18
AFG2YLR397C DLD3P39976 496 aaKnown RBP7.69□□□□□ -1.18
AFG2YLR397C CNN1P43618 361 aa7.69□□□□□ -1.18
AFG2YLR397C MDR1P53258 950 aa7.69□□□□□ -1.18
AFG2YLR397C TOF1P53840 1238 aa7.69□□□□□ -1.18
AFG2YLR397C TBF1Q02457 562 aa7.69□□□□□ -1.18
AFG2YLR397C HIM1Q06674 414 aa7.69□□□□□ -1.18
AFG2YLR397C SYO1Q07395 620 aa7.69□□□□□ -1.18
AFG2YLR397C SMC5Q08204 1093 aa7.69□□□□□ -1.18
AFG2YLR397C AFT2Q08957 416 aa7.69□□□□□ -1.18
AFG2YLR397C VIK1Q12045 647 aa7.69□□□□□ -1.18
AFG2YLR397C PGA3Q12746 312 aaKnown RBP7.69□□□□□ -1.18
AFG2YLR397C IML1P47170 1584 aa7.69□□□□□ -1.18
AFG2YLR397C GFA1P14742 717 aaKnown RBP7.69□□□□□ -1.18
AFG2YLR397C TRM1P15565 570 aaKnown RBP7.69□□□□□ -1.18
AFG2YLR397C ALG1P16661 449 aa7.69□□□□□ -1.18
AFG2YLR397C SLX5P32828 619 aaKnown RBP7.69□□□□□ -1.18
AFG2YLR397C GRE3P38715 327 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
AFG2YLR397C EFM4P40516 257 aa7.69□□□□□ -1.18
AFG2YLR397C NOP9P47077 666 aaKnown RBP7.69□□□□□ -1.18
AFG2YLR397C PEX21P50091 288 aa7.69□□□□□ -1.18
AFG2YLR397C IPI3P53877 555 aa7.69□□□□□ -1.18
AFG2YLR397C DXO1Q06349 442 aa7.69□□□□□ -1.18
AFG2YLR397C SGO1Q08490 590 aa7.69□□□□□ -1.18
AFG2YLR397C SAM3Q08986 587 aa7.69□□□□□ -1.18
AFG2YLR397C MNL2Q12205 849 aa7.69□□□□□ -1.18
AFG2YLR397C CLB2P24869 491 aa7.68□□□□□ -1.18
AFG2YLR397C RPT1P33299 467 aaKnown RBP7.68□□□□□ -1.18
AFG2YLR397C AAP1P37898 856 aaKnown RBP7.68□□□□□ -1.18
AFG2YLR397C RPH1P39956 796 aa7.68□□□□□ -1.18
AFG2YLR397C MDV1P47025 714 aa7.68□□□□□ -1.18
AFG2YLR397C NUP84P52891 726 aa7.68□□□□□ -1.18
AFG2YLR397C SPC105P53148 917 aa7.68□□□□□ -1.18
AFG2YLR397C SWP1Q02795 286 aa7.68□□□□□ -1.18
AFG2YLR397C EMI2Q04409 500 aaKnown RBP7.68□□□□□ -1.18
AFG2YLR397C TIP41Q12199 356 aa7.68□□□□□ -1.18
AFG2YLR397C YRM1Q12340 786 aa7.68□□□□□ -1.18
AFG2YLR397C TOM70P07213 617 aaKnown RBP7.68□□□□□ -1.18
AFG2YLR397C MTF2P10849 440 aa7.68□□□□□ -1.18
AFG2YLR397C KAR2P16474 682 aaKnown RBP7.68□□□□□ -1.18
AFG2YLR397C PXL1P36166 706 aa7.68□□□□□ -1.18
AFG2YLR397C ZRG17P53735 605 aa7.68□□□□□ -1.18
AFG2YLR397C VPS16Q03308 798 aa7.68□□□□□ -1.18
AFG2YLR397C YML020WQ03722 664 aa7.68□□□□□ -1.18
AFG2YLR397C RRN11Q04712 507 aa7.68□□□□□ -1.18
AFG2YLR397C DON1Q05610 365 aa7.68□□□□□ -1.18
AFG2YLR397C YDL109CQ12103 647 aa7.68□□□□□ -1.18
AFG2YLR397C DCD1P06773 312 aa7.67□□□□□ -1.18
AFG2YLR397C MCM3P24279 971 aaKnown RBP7.67□□□□□ -1.18
AFG2YLR397C SPS22P25380 463 aa7.67□□□□□ -1.18
AFG2YLR397C SBA1P28707 216 aaKnown RBP7.67□□□□□ -1.18
AFG2YLR397C CNS1P33313 385 aa7.67□□□□□ -1.18
AFG2YLR397C YKL091CP33324 310 aaKnown RBP7.67□□□□□ -1.18
AFG2YLR397C STB4P50104 949 aa7.67□□□□□ -1.18
AFG2YLR397C KAP114P53067 1004 aa7.67□□□□□ -1.18
AFG2YLR397C COS6P53344 381 aa7.67□□□□□ -1.18
AFG2YLR397C NGL3Q03210 505 aa7.67□□□□□ -1.18
AFG2YLR397C BUD22Q04347 519 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 95.2 ms