RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YEL1P34225 687 aa2.78□□□□□ -1.96
SGD1YLR336C CTF8P38877 133 aa2.78□□□□□ -1.96
SGD1YLR336C SDP1P40479 209 aa2.78□□□□□ -1.96
SGD1YLR336C UBC9P50623 157 aaPredicted RBP2.78□□□□□ -1.96
SGD1YLR336C PUS2P53167 370 aa2.78□□□□□ -1.96
SGD1YLR336C NHX1Q04121 633 aa2.78□□□□□ -1.96
SGD1YLR336C IOC4Q04213 475 aa2.78□□□□□ -1.96
SGD1YLR336C RXT3Q07458 294 aa2.78□□□□□ -1.96
SGD1YLR336C ATG19P35193 415 aa2.78□□□□□ -1.96
SGD1YLR336C TYS1P36421 394 aaKnown RBP2.78□□□□□ -1.96
SGD1YLR336C YGR237CP50089 785 aa2.78□□□□□ -1.96
SGD1YLR336C SPT20P50875 604 aa2.78□□□□□ -1.96
SGD1YLR336C UME1Q03010 460 aa2.78□□□□□ -1.96
SGD1YLR336C ACK1Q07622 623 aaPredicted RBP2.78□□□□□ -1.96
SGD1YLR336C GUP2Q08929 609 aa2.78□□□□□ -1.96
SGD1YLR336C GIN4Q12263 1142 aa2.78□□□□□ -1.96
SGD1YLR336C YKR051WP36142 418 aa2.77□□□□□ -1.97
SGD1YLR336C RPN10P38886 268 aaKnown RBP2.77□□□□□ -1.97
SGD1YLR336C MSS4P38994 779 aa2.77□□□□□ -1.97
SGD1YLR336C ZIP2P53061 704 aa2.77□□□□□ -1.97
SGD1YLR336C YGL081WP53156 320 aa2.77□□□□□ -1.97
SGD1YLR336C SLU7Q02775 382 aaKnown RBP2.77□□□□□ -1.97
SGD1YLR336C ASM4Q05166 528 aa2.77□□□□□ -1.97
SGD1YLR336C YLR149CQ99296 730 aa2.77□□□□□ -1.97
SGD1YLR336C SOD2P00447 233 aa2.77□□□□□ -1.97
SGD1YLR336C SED4P25365 1065 aa2.77□□□□□ -1.97
SGD1YLR336C THI80P35202 319 aa2.77□□□□□ -1.97
SGD1YLR336C PLB1P39105 664 aa2.77□□□□□ -1.97
SGD1YLR336C SSY5P47002 699 aa2.77□□□□□ -1.97
SGD1YLR336C AVT1P47082 602 aa2.77□□□□□ -1.97
SGD1YLR336C PMT3P47190 753 aa2.77□□□□□ -1.97
SGD1YLR336C YLR224WQ05947 369 aa2.77□□□□□ -1.97
SGD1YLR336C NOP12Q08208 459 aaKnown RBP2.77□□□□□ -1.97
SGD1YLR336C GPR1Q12361 961 aa2.77□□□□□ -1.97
SGD1YLR336C KCS1Q12494 1050 aa2.77□□□□□ -1.97
SGD1YLR336C PRP4P20053 465 aaKnown RBP2.77□□□□□ -1.97
SGD1YLR336C CCR4P31384 837 aaKnown RBP2.77□□□□□ -1.97
SGD1YLR336C YHR078WP38799 552 aa2.77□□□□□ -1.97
SGD1YLR336C YJR096WP47137 282 aa2.77□□□□□ -1.97
SGD1YLR336C MTQ2Q03920 221 aaPredicted RBP2.77□□□□□ -1.97
SGD1YLR336C NPC2Q12408 173 aa2.77□□□□□ -1.97
SGD1YLR336C TUB3P09734 445 aaKnown RBP2.76□□□□□ -1.97
SGD1YLR336C PRP6P19735 899 aaPredicted RBP2.76□□□□□ -1.97
SGD1YLR336C SEC21P32074 935 aaKnown RBP2.76□□□□□ -1.97
SGD1YLR336C TOD6P34219 525 aa2.76□□□□□ -1.97
SGD1YLR336C LST4P34239 828 aa2.76□□□□□ -1.97
SGD1YLR336C FLR1P38124 548 aa2.76□□□□□ -1.97
SGD1YLR336C HSL7P38274 827 aa2.76□□□□□ -1.97
SGD1YLR336C SAK1P38990 1142 aa2.76□□□□□ -1.97
SGD1YLR336C GPP1P41277 250 aaKnown RBP2.76□□□□□ -1.97
SGD1YLR336C NPY1P53164 384 aa2.76□□□□□ -1.97
SGD1YLR336C GUD1Q07729 489 aa2.76□□□□□ -1.97
SGD1YLR336C NUP145P49687 1317 aa2.76□□□□□ -1.97
SGD1YLR336C BNA2P47125 453 aa2.76□□□□□ -1.97
SGD1YLR336C PRP43P53131 767 aaKnown RBP2.76□□□□□ -1.97
SGD1YLR336C RIM8P53179 542 aa2.76□□□□□ -1.97
SGD1YLR336C MUS81Q04149 632 aaPredicted RBP2.76□□□□□ -1.97
SGD1YLR336C COG8Q04632 607 aa2.76□□□□□ -1.97
SGD1YLR336C PRP19P32523 503 aaKnown RBP2.75□□□□□ -1.97
SGD1YLR336C MNN4P36044 1178 aa2.75□□□□□ -1.97
SGD1YLR336C CKB2P38930 258 aa2.75□□□□□ -1.97
SGD1YLR336C NIT1P40447 199 aa2.75□□□□□ -1.97
SGD1YLR336C VHR1P40522 640 aa2.75□□□□□ -1.97
SGD1YLR336C ARP4P80428 489 aa2.75□□□□□ -1.97
SGD1YLR336C SSB1P11484 613 aaKnown RBP2.75□□□□□ -1.97
SGD1YLR336C PRE10P21242 288 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
SGD1YLR336C DOT6P40059 670 aaKnown RBP2.75□□□□□ -1.97
SGD1YLR336C SSB2P40150 613 aaKnown RBP2.75□□□□□ -1.97
SGD1YLR336C PFA3P42836 336 aa2.75□□□□□ -1.97
SGD1YLR336C YFL052WP43551 465 aa2.75□□□□□ -1.97
SGD1YLR336C YJR120WP47157 116 aa2.75□□□□□ -1.97
SGD1YLR336C RPN7Q06103 429 aaKnown RBP2.75□□□□□ -1.97
SGD1YLR336C FAP7Q12055 197 aaPredicted RBP2.75□□□□□ -1.97
SGD1YLR336C LAS17Q12446 633 aa2.75□□□□□ -1.97
SGD1YLR336C KAR4P25583 335 aa2.74□□□□□ -1.97
SGD1YLR336C ELM1P32801 640 aa2.74□□□□□ -1.97
SGD1YLR336C MRPS35P53292 345 aa2.74□□□□□ -1.97
SGD1YLR336C ASI2P53895 289 aa2.74□□□□□ -1.97
SGD1YLR336C YKR018CP36114 725 aa2.74□□□□□ -1.97
SGD1YLR336C PZF1P39933 429 aa2.74□□□□□ -1.97
SGD1YLR336C LEE1Q02799 301 aaKnown RBP2.74□□□□□ -1.97
SGD1YLR336C TMA10Q06177 86 aa2.74□□□□□ -1.97
SGD1YLR336C TMA17Q12513 150 aa2.74□□□□□ -1.97
SGD1YLR336C RPP2AP05319 106 aaKnown RBP2.73□□□□□ -1.97
SGD1YLR336C EXG2P52911 562 aa2.73□□□□□ -1.97
SGD1YLR336C FOL1P53848 824 aa2.73□□□□□ -1.97
SGD1YLR336C PEX19Q07418 342 aa2.73□□□□□ -1.97
SGD1YLR336C DCS2Q12123 353 aa2.73□□□□□ -1.97
SGD1YLR336C SWM1Q12379 170 aa2.73□□□□□ -1.97
SGD1YLR336C MIP6P38760 659 aaKnown RBP2.73□□□□□ -1.97
SGD1YLR336C OAF1P39720 1047 aaPredicted RBP2.73□□□□□ -1.97
SGD1YLR336C IRC24P40580 263 aa2.73□□□□□ -1.97
SGD1YLR336C MTR3P48240 250 aaPredicted RBP2.73□□□□□ -1.97
SGD1YLR336C HFD1Q04458 532 aa2.73□□□□□ -1.97
SGD1YLR336C EUG1P32474 517 aa2.72□□□□□ -1.97
SGD1YLR336C TOM20P35180 183 aa2.72□□□□□ -1.97
SGD1YLR336C PCL10P53124 433 aa2.72□□□□□ -1.97
SGD1YLR336C BRE5P53741 515 aaKnown RBP2.72□□□□□ -1.97
SGD1YLR336C ECM9Q02202 377 aa2.72□□□□□ -1.97
SGD1YLR336C DAL3P32459 195 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms