RNA–Protein interactions for RNA: YLR249W

YEF3, Transcript of Gamma subunit of translational elongation factor eEF1B, yeast

Gene YEF3, Length 3,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF3	YLR249W	RET3	P53600	189 aa		2.58	□□□□□ -2
YEF3	YLR249W	NOP15	P53927	220 aa	Predicted RBP	2.58	□□□□□ -2
YEF3	YLR249W	SEC5	P89102	971 aa		2.58	□□□□□ -2
YEF3	YLR249W	HAS1	Q03532	505 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	NNT1	Q05874	261 aa		2.58	□□□□□ -2
YEF3	YLR249W	SKG3	Q06315	1026 aa		2.58	□□□□□ -2
YEF3	YLR249W	TFC6	Q06339	672 aa		2.58	□□□□□ -2
YEF3	YLR249W	RRI2	Q12348	645 aa		2.58	□□□□□ -2
YEF3	YLR249W	CIT2	P08679	460 aa		2.58	□□□□□ -2
YEF3	YLR249W	KAR1	P11927	433 aa		2.58	□□□□□ -2
YEF3	YLR249W	RED1	P14291	827 aa		2.58	□□□□□ -2
YEF3	YLR249W	MAK31	P23059	88 aa		2.58	□□□□□ -2
YEF3	YLR249W	VAC17	P25591	423 aa		2.58	□□□□□ -2
YEF3	YLR249W	KRE2	P27809	442 aa		2.58	□□□□□ -2
YEF3	YLR249W	EFB1	P32471	206 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	MRT4	P33201	236 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	OTU2	P38747	307 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	TDA3	P38758	523 aa		2.58	□□□□□ -2
YEF3	YLR249W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
YEF3	YLR249W	CAJ1	P39101	391 aa		2.58	□□□□□ -2
YEF3	YLR249W	SAP1	P39955	897 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	TMN3	P40071	706 aa		2.58	□□□□□ -2
YEF3	YLR249W	YGL082W	P53155	381 aa		2.58	□□□□□ -2
YEF3	YLR249W	YGL081W	P53156	320 aa		2.58	□□□□□ -2
YEF3	YLR249W	TUB4	P53378	473 aa		2.58	□□□□□ -2
YEF3	YLR249W	PLP1	Q04004	230 aa		2.58	□□□□□ -2
YEF3	YLR249W	WRS1	Q12109	432 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	RRP6	Q12149	733 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	BMT6	Q12291	365 aa		2.58	□□□□□ -2
YEF3	YLR249W	PTC5	Q12511	572 aa		2.58	□□□□□ -2
YEF3	YLR249W	YOL087C	Q99247	1116 aa		2.58	□□□□□ -2
YEF3	YLR249W	MER1	P16523	270 aa		2.57	□□□□□ -2
YEF3	YLR249W	SEN2	P16658	377 aa		2.57	□□□□□ -2
YEF3	YLR249W	SRO9	P25567	434 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	MCM4	P30665	933 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	SEC8	P32855	1065 aa		2.57	□□□□□ -2
YEF3	YLR249W	DOM34	P33309	386 aa		2.57	□□□□□ -2
YEF3	YLR249W	SER1	P33330	395 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	MNR2	P35724	969 aa		2.57	□□□□□ -2
YEF3	YLR249W	ADE17	P38009	592 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	ERT1	P38140	529 aa		2.57	□□□□□ -2
YEF3	YLR249W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	RIP-Chip
YEF3	YLR249W	AKR1	P39010	764 aa		2.57	□□□□□ -2
YEF3	YLR249W	FTR1	P40088	404 aa		2.57	□□□□□ -2
YEF3	YLR249W	SNZ3	P43545	298 aa		2.57	□□□□□ -2
YEF3	YLR249W	BNA1	P47096	177 aa		2.57	□□□□□ -2
YEF3	YLR249W	CTH1	P47976	325 aa		2.57	□□□□□ -2
YEF3	YLR249W	ATG1	P53104	897 aa		2.57	□□□□□ -2
YEF3	YLR249W	SNZ2	P53824	298 aa		2.57	□□□□□ -2
YEF3	YLR249W	SFB2	P53953	876 aa		2.57	□□□□□ -2
YEF3	YLR249W	WAR1	Q03631	944 aa		2.57	□□□□□ -2
YEF3	YLR249W	YDR286C	Q05530	114 aa		2.57	□□□□□ -2
YEF3	YLR249W	DON1	Q05610	365 aa		2.57	□□□□□ -2
YEF3	YLR249W	FUS2	Q05670	677 aa		2.57	□□□□□ -2
YEF3	YLR249W	SGD1	Q06132	899 aa		2.57	□□□□□ -2
YEF3	YLR249W	FRA1	Q07825	749 aa		2.57	□□□□□ -2
YEF3	YLR249W	GRX6	Q12438	231 aa		2.57	□□□□□ -2
YEF3	YLR249W	PGA3	Q12746	312 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	HXK1	P04806	485 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	ASF2	P32448	525 aa	Predicted RBP	2.57	□□□□□ -2
YEF3	YLR249W	BIO2	P32451	375 aa		2.57	□□□□□ -2
YEF3	YLR249W	TFC4	P33339	1025 aa		2.57	□□□□□ -2
YEF3	YLR249W	PEX6	P33760	1030 aa		2.57	□□□□□ -2
YEF3	YLR249W	PEX18	P38855	283 aa		2.57	□□□□□ -2
YEF3	YLR249W	SPC72	P39723	622 aa		2.57	□□□□□ -2
YEF3	YLR249W	EDC3	P39998	551 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	VID28	P40547	921 aa		2.57	□□□□□ -2
YEF3	YLR249W	YJL171C	P46992	396 aa		2.57	□□□□□ -2
YEF3	YLR249W	ECL1	P48235	211 aa		2.57	□□□□□ -2
YEF3	YLR249W	DIP5	P53388	608 aa		2.57	□□□□□ -2
YEF3	YLR249W	UFD2	P54860	961 aa		2.57	□□□□□ -2
YEF3	YLR249W	RMD1	Q03441	430 aa		2.57	□□□□□ -2
YEF3	YLR249W	OYE2	Q03558	400 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	SVF1	Q05515	481 aa		2.57	□□□□□ -2
YEF3	YLR249W	CUR1	Q06469	252 aa		2.57	□□□□□ -2
YEF3	YLR249W	YDL124W	Q07551	312 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	GRC3	Q07845	632 aa		2.57	□□□□□ -2
YEF3	YLR249W	CTI6	Q08923	506 aa		2.57	□□□□□ -2
YEF3	YLR249W	YRR1	Q12172	810 aa		2.57	□□□□□ -2
YEF3	YLR249W	RAD59	Q12223	238 aa		2.57	□□□□□ -2
YEF3	YLR249W	SRF1	Q12516	437 aa		2.57	□□□□□ -2
YEF3	YLR249W	HIS3	P06633	220 aa		2.57	□□□□□ -2
YEF3	YLR249W	HEM1	P09950	548 aa	Predicted RBP	2.57	□□□□□ -2
YEF3	YLR249W	TRM1	P15565	570 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	KGD2	P19262	463 aa	Predicted RBP	2.57	□□□□□ -2
YEF3	YLR249W	SFL1	P20134	766 aa		2.57	□□□□□ -2
YEF3	YLR249W	SEC14	P24280	304 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	YJU3	P28321	313 aa		2.57	□□□□□ -2
YEF3	YLR249W	KAR9	P32526	644 aa		2.57	□□□□□ -2
YEF3	YLR249W	NGR1	P32831	672 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	NUP120	P35729	1037 aa		2.57	□□□□□ -2
YEF3	YLR249W	SWC5	P38326	303 aa		2.57	□□□□□ -2
YEF3	YLR249W	XDJ1	P39102	459 aa		2.57	□□□□□ -2
YEF3	YLR249W	YMR147W	P40218	223 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	ALA1	P40825	983 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	PXA1	P41909	870 aa		2.57	□□□□□ -2
YEF3	YLR249W	RPN11	P43588	306 aa	Known RBP	2.57	□□□□□ -2
YEF3	YLR249W	CNN1	P43618	361 aa		2.57	□□□□□ -2
YEF3	YLR249W	YJL181W	P46987	611 aa		2.57	□□□□□ -2
YEF3	YLR249W	JJJ2	P46997	583 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms