RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	TMA10	Q06177	86 aa		3.11	□□□□□ -1.91
NUP82	YJL061W	GUP2	Q08929	609 aa		3.11	□□□□□ -1.91
NUP82	YJL061W	KCS1	Q12494	1050 aa		3.11	□□□□□ -1.91
NUP82	YJL061W	LST4	P34239	828 aa		3.11	□□□□□ -1.91
NUP82	YJL061W	MNN10	P50108	393 aa	Known RBP	3.11	□□□□□ -1.91
NUP82	YJL061W	THI21	Q08975	551 aa		3.11	□□□□□ -1.91
NUP82	YJL061W	SWM1	Q12379	170 aa		3.11	□□□□□ -1.91
NUP82	YJL061W	RAD18	P10862	487 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	RPL8A	P17076	256 aa	Known RBP	3.1	□□□□□ -1.91
NUP82	YJL061W	HOG1	P32485	435 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
NUP82	YJL061W	PZF1	P39933	429 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	YJR142W	P47173	342 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	MCM6	P53091	1017 aa	Known RBP	3.1	□□□□□ -1.91
NUP82	YJL061W	YNL193W	P53870	558 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	CRR1	Q05790	422 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	ADR1	P07248	1323 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	NGG1	P32494	702 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	FLR1	P38124	548 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	SSY5	P47002	699 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	EXG2	P52911	562 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	ZIP2	P53061	704 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	DNM1	P54861	757 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	NHX1	Q04121	633 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	ENB1	Q08299	606 aa		3.1	□□□□□ -1.91
NUP82	YJL061W	CAD1	P24813	409 aa	Known RBP	3.09	□□□□□ -1.91
NUP82	YJL061W	SEC21	P32074	935 aa	Known RBP	3.09	□□□□□ -1.91
NUP82	YJL061W	HSL7	P38274	827 aa		3.09	□□□□□ -1.91
NUP82	YJL061W	DOT6	P40059	670 aa	Known RBP	3.09	□□□□□ -1.91
NUP82	YJL061W	YFL052W	P43551	465 aa		3.09	□□□□□ -1.91
NUP82	YJL061W	HLJ1	P48353	224 aa		3.09	□□□□□ -1.91
NUP82	YJL061W	YGL081W	P53156	320 aa		3.09	□□□□□ -1.91
NUP82	YJL061W	PEX19	Q07418	342 aa		3.09	□□□□□ -1.91
NUP82	YJL061W	YLR001C	Q07895	862 aa		3.09	□□□□□ -1.91
NUP82	YJL061W	KAR4	P25583	335 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	PCL2	P25693	308 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	NPY1	P53164	384 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	SDA1	P53313	767 aa	Known RBP	3.08	□□□□□ -1.92
NUP82	YJL061W	PKH1	Q03407	766 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	YDR338C	Q05497	695 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	ESC8	Q08119	714 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	SFL1	P20134	766 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	CTS1	P29029	562 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	DCG1	P32460	244 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	SAK1	P38990	1142 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	VHR1	P40522	640 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	BNA2	P47125	453 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	MTR3	P48240	250 aa	Predicted RBP	3.08	□□□□□ -1.92
NUP82	YJL061W	ASI2	P53895	289 aa		3.08	□□□□□ -1.92
NUP82	YJL061W	TUB3	P09734	445 aa	Known RBP	3.07	□□□□□ -1.92
NUP82	YJL061W	PFK1	P16861	987 aa	Known RBP	3.07	□□□□□ -1.92
NUP82	YJL061W	URN1	Q06525	465 aa	Known RBP	3.07	□□□□□ -1.92
NUP82	YJL061W	TRM11	Q12463	433 aa		3.07	□□□□□ -1.92
NUP82	YJL061W	HCM1	P25364	564 aa		3.07	□□□□□ -1.92
NUP82	YJL061W	SHM2	P37291	469 aa	Known RBP	3.07	□□□□□ -1.92
NUP82	YJL061W	PCM1	P38628	557 aa	Known RBP	3.07	□□□□□ -1.92
NUP82	YJL061W	CRP1	P38845	465 aa	Known RBP	3.07	□□□□□ -1.92
NUP82	YJL061W	MSS4	P38994	779 aa		3.07	□□□□□ -1.92
NUP82	YJL061W	MGS1	P40151	587 aa		3.07	□□□□□ -1.92
NUP82	YJL061W	PFA3	P42836	336 aa		3.07	□□□□□ -1.92
NUP82	YJL061W	PMT3	P47190	753 aa		3.07	□□□□□ -1.92
NUP82	YJL061W	MUS81	Q04149	632 aa	Predicted RBP	3.07	□□□□□ -1.92
NUP82	YJL061W	RPN7	Q06103	429 aa	Known RBP	3.07	□□□□□ -1.92
NUP82	YJL061W	ATG33	Q06485	197 aa		3.07	□□□□□ -1.92
NUP82	YJL061W	GUD1	Q07729	489 aa		3.07	□□□□□ -1.92
NUP82	YJL061W	GIN4	Q12263	1142 aa		3.07	□□□□□ -1.92
NUP82	YJL061W	PMA1	P05030	918 aa	Known RBP	3.06	□□□□□ -1.92
NUP82	YJL061W	HMG1	P12683	1054 aa		3.06	□□□□□ -1.92
NUP82	YJL061W	MET13	P53128	600 aa		3.06	□□□□□ -1.92
NUP82	YJL061W	YBP2	P53169	641 aa		3.06	□□□□□ -1.92
NUP82	YJL061W	SLU7	Q02775	382 aa	Known RBP	3.06	□□□□□ -1.92
NUP82	YJL061W	YLR149C	Q99296	730 aa		3.06	□□□□□ -1.92
NUP82	YJL061W	NUP145	P49687	1317 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	YLR415C	O13578	112 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	MIH1	P23748	554 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	CTF13	P35203	478 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	YKL222C	P35995	705 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	RPP1	P38786	293 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	GIP4	P39732	760 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	AIM14	P53109	570 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	ORC4	P54791	529 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	THI73	Q07904	523 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	YKR018C	P36114	725 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	YKR051W	P36142	418 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	SIC1	P38634	284 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	UBC9	P50623	157 aa	Predicted RBP	3.05	□□□□□ -1.92
NUP82	YJL061W	YNR029C	P53729	429 aa	Known RBP	3.05	□□□□□ -1.92
NUP82	YJL061W	NRG1	Q03125	231 aa		3.05	□□□□□ -1.92
NUP82	YJL061W	TRP4	P07285	380 aa	Predicted RBP	3.04	□□□□□ -1.92
NUP82	YJL061W	PRP4	P20053	465 aa	Known RBP	3.04	□□□□□ -1.92
NUP82	YJL061W	YCR015C	P25616	317 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	YBR259W	P38338	688 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	TAF1	P46677	1066 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	PCL10	P53124	433 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	UME1	Q03010	460 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	AIM39	Q08223	395 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	NTO1	Q12311	748 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	LAS17	Q12446	633 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	Q0142	Q9ZZW4	58 aa		3.04	□□□□□ -1.92
NUP82	YJL061W	MET3	P08536	511 aa		3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 187.4 ms