RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C COX4P04037 155 aa10.49□□□□□ -0.73
MET28YIR017C ASP3-2P0CX77 362 aa10.49□□□□□ -0.73
MET28YIR017C ASP3-3P0CX78 362 aa10.49□□□□□ -0.73
MET28YIR017C ASP3-4P0CX79 362 aa10.49□□□□□ -0.73
MET28YIR017C ASP3-1P0CZ17 362 aa10.49□□□□□ -0.73
MET28YIR017C TIF1P10081 395 aaKnown RBP10.49□□□□□ -0.73
MET28YIR017C SMC1P32908 1225 aa10.49□□□□□ -0.73
MET28YIR017C RTT107P38850 1070 aa10.49□□□□□ -0.73
MET28YIR017C SMC2P38989 1170 aaKnown RBP10.49□□□□□ -0.73
MET28YIR017C VFA1P40080 203 aa10.49□□□□□ -0.73
MET28YIR017C DAS1P47005 663 aa10.49□□□□□ -0.73
MET28YIR017C HFM1P51979 1187 aa10.49□□□□□ -0.73
MET28YIR017C SKY1Q03656 742 aa10.49□□□□□ -0.73
MET28YIR017C IWR1Q07532 353 aaPredicted RBP10.49□□□□□ -0.73
MET28YIR017C ATG9Q12142 997 aa10.49□□□□□ -0.73
MET28YIR017C OSH2Q12451 1283 aa10.49□□□□□ -0.73
MET28YIR017C RPL4AP10664 362 aaKnown RBP10.48□□□□□ -0.73
MET28YIR017C CYC8P14922 966 aa10.48□□□□□ -0.73
MET28YIR017C CBF2P32504 956 aa10.48□□□□□ -0.73
MET28YIR017C KIC1P38692 1080 aa10.48□□□□□ -0.73
MET28YIR017C ESL1P40456 1118 aa10.48□□□□□ -0.73
MET28YIR017C SDS3P40505 327 aa10.48□□□□□ -0.73
MET28YIR017C YAP5P40574 245 aa10.48□□□□□ -0.73
MET28YIR017C CLA4P48562 842 aa10.48□□□□□ -0.73
MET28YIR017C RPL4BP49626 362 aaKnown RBP10.48□□□□□ -0.73
MET28YIR017C YGR130CP53278 816 aa10.48□□□□□ -0.73
MET28YIR017C UBP3Q01477 912 aaKnown RBP RIP-Chip data10.48□□□□□ -0.73not detected
MET28YIR017C UME1Q03010 460 aa10.48□□□□□ -0.73
MET28YIR017C YCG1Q06680 1035 aa10.48□□□□□ -0.73
MET28YIR017C YDL206WQ12424 762 aa10.48□□□□□ -0.73
MET28YIR017C MOT1P32333 1867 aa10.47□□□□□ -0.73
MET28YIR017C PXL1P36166 706 aa10.47□□□□□ -0.73
MET28YIR017C YER186CP40101 306 aa10.47□□□□□ -0.73
MET28YIR017C STE20Q03497 939 aaKnown RBP10.47□□□□□ -0.73
MET28YIR017C HMI1Q12039 706 aa10.47□□□□□ -0.73
MET28YIR017C PUS1Q12211 544 aaKnown RBP10.47□□□□□ -0.73
MET28YIR017C GIS3Q12418 502 aa10.47□□□□□ -0.73
MET28YIR017C VPS13Q07878 3144 aa10.46□□□□□ -0.73
MET28YIR017C IME1P21190 360 aa10.46□□□□□ -0.73
MET28YIR017C RSA4P25382 515 aaKnown RBP10.46□□□□□ -0.73
MET28YIR017C KIP1P28742 1111 aa10.46□□□□□ -0.73
MET28YIR017C CSE2P33308 149 aa10.46□□□□□ -0.73
MET28YIR017C MSC7P38694 644 aa10.46□□□□□ -0.73
MET28YIR017C YHR054CP38780 354 aa10.46□□□□□ -0.73
MET28YIR017C ULI1P43604 169 aa10.46□□□□□ -0.73
MET28YIR017C STR2P47164 639 aa10.46□□□□□ -0.73
MET28YIR017C ESBP6P53918 673 aa10.46□□□□□ -0.73
MET28YIR017C OPY2Q06810 360 aa10.46□□□□□ -0.73
MET28YIR017C DNL4Q08387 944 aaPredicted RBP10.46□□□□□ -0.73
MET28YIR017C YOR022CQ12204 715 aa10.46□□□□□ -0.73
MET28YIR017C RAD54P32863 898 aa10.45□□□□□ -0.74
MET28YIR017C KAP123P40069 1113 aaKnown RBP10.45□□□□□ -0.74
MET28YIR017C CPR7P47103 393 aa10.45□□□□□ -0.74
MET28YIR017C YML082WQ04533 649 aaKnown RBP10.45□□□□□ -0.74
MET28YIR017C TSR1Q07381 788 aaKnown RBP10.45□□□□□ -0.74
MET28YIR017C SDH5Q08230 162 aa10.45□□□□□ -0.74
MET28YIR017C ABP140Q08641 628 aaKnown RBP10.45□□□□□ -0.74
MET28YIR017C PPR1P07272 904 aaPredicted RBP10.44□□□□□ -0.74
MET28YIR017C MSD1P15179 658 aaKnown RBP10.44□□□□□ -0.74
MET28YIR017C COX11P19516 300 aaKnown RBP10.44□□□□□ -0.74
MET28YIR017C MRPL7P36519 292 aa10.44□□□□□ -0.74
MET28YIR017C SLX1P38324 304 aa10.44□□□□□ -0.74
MET28YIR017C JHD1P40034 492 aa10.44□□□□□ -0.74
MET28YIR017C IES1P43579 692 aa10.44□□□□□ -0.74
MET28YIR017C UTP5Q04177 643 aaKnown RBP10.44□□□□□ -0.74
MET28YIR017C APL4Q12028 832 aa10.44□□□□□ -0.74
MET28YIR017C RIF1P29539 1916 aa10.44□□□□□ -0.74
MET28YIR017C CDC33P07260 213 aaKnown RBP10.43□□□□□ -0.74
MET28YIR017C SPO12P17123 173 aa10.43□□□□□ -0.74
MET28YIR017C CDC42P19073 191 aa10.43□□□□□ -0.74
MET28YIR017C CAD1P24813 409 aaKnown RBP10.43□□□□□ -0.74
MET28YIR017C RRT12P25381 491 aa10.43□□□□□ -0.74
MET28YIR017C PDC6P26263 563 aaKnown RBP10.43□□□□□ -0.74
MET28YIR017C HEL1P36113 551 aa10.43□□□□□ -0.74
MET28YIR017C JNM1P36224 373 aa10.43□□□□□ -0.74
MET28YIR017C BUD16P39988 312 aa10.43□□□□□ -0.74
MET28YIR017C HXT8P40886 569 aa10.43□□□□□ -0.74
MET28YIR017C SBE2P42223 864 aaKnown RBP10.43□□□□□ -0.74
MET28YIR017C DRN1P53255 507 aaKnown RBP10.43□□□□□ -0.74
MET28YIR017C NOP13P53883 403 aaKnown RBP RIP-Chip data10.43□□□□□ -0.74not detected
MET28YIR017C EAR1Q03212 550 aa10.43□□□□□ -0.74
MET28YIR017C VPS38Q05919 439 aa10.43□□□□□ -0.74
MET28YIR017C YLR455WQ06188 304 aa10.43□□□□□ -0.74
MET28YIR017C ESC8Q08119 714 aa10.43□□□□□ -0.74
MET28YIR017C NEW1Q08972 1196 aaKnown RBP10.43□□□□□ -0.74
MET28YIR017C CTF3Q12748 733 aa10.43□□□□□ -0.74
MET28YIR017C SNF1P06782 633 aaKnown RBP10.42□□□□□ -0.74
MET28YIR017C TUP1P16649 713 aa10.42□□□□□ -0.74
MET28YIR017C RRP43P25359 394 aaPredicted RBP10.42□□□□□ -0.74
MET28YIR017C SPT5P27692 1063 aaKnown RBP10.42□□□□□ -0.74
MET28YIR017C CYS3P31373 394 aaKnown RBP10.42□□□□□ -0.74
MET28YIR017C MFT1P33441 392 aaKnown RBP10.42□□□□□ -0.74
MET28YIR017C MNR2P35724 969 aa10.42□□□□□ -0.74
MET28YIR017C PTC4P38089 393 aa10.42□□□□□ -0.74
MET28YIR017C ATG3P40344 310 aa10.42□□□□□ -0.74
MET28YIR017C RSC8P43609 557 aaKnown RBP10.42□□□□□ -0.74
MET28YIR017C ALT1P52893 592 aa10.42□□□□□ -0.74
MET28YIR017C MCM6P53091 1017 aaKnown RBP10.42□□□□□ -0.74
MET28YIR017C ERG5P54781 538 aa10.42□□□□□ -0.74
MET28YIR017C GAL10P04397 699 aa10.41□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 130.8 ms