RNA–Protein interactions for RNA: YIL115C

NUP159, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP159, Length 4,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP159	YIL115C	ZDS2	P54786	942 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	AIM41	Q12032	185 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	HMI1	Q12039	706 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	RIB2	Q12362	591 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	KOG1	P38873	1557 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	MBR1	P23493	339 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	NAM7	P30771	971 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	RRN6	P32786	894 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	SLA2	P33338	968 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	DBP7	P36120	742 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	HSM3	P38348	480 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	MDV1	P47025	714 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	COP1	P53622	1201 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	USA1	Q03714	838 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	MLC2	Q06580	163 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	VPS54	Q12071	889 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	CLF1	Q12309	687 aa	Predicted RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	NTO1	Q12311	748 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	MLP1	Q02455	1875 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	YCF1	P39109	1515 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	PRP6	P19735	899 aa	Predicted RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	HES1	P35843	434 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	NMD5	P46970	1048 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	ARI1	P53111	347 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	PRP43	P53131	767 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	DRN1	P53255	507 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	TPO2	P53283	614 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	COG5	P53951	403 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
NUP159	YIL115C	VPS16	Q03308	798 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	NOP6	Q07623	225 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	CUE5	Q08412	411 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	RED1	P14291	827 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	FUN30	P31380	1131 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	MDJ1	P35191	511 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	YBL028C	P38202	106 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	AMN1	P38285	549 aa	Predicted RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	JEM1	P40358	645 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	FMP33	P46998	180 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	CCM1	P48237	864 aa	Predicted RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	ASE1	P50275	885 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	MSN5	P52918	1224 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	DBP6	P53734	629 aa	Known RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	BOP3	P53958	396 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	HEH2	Q03281	663 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	YLR177W	Q06251	628 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	DIA2	Q08496	732 aa	Predicted RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	RTT10	Q08924	1013 aa		3.74	□□□□□ -1.81
NUP159	YIL115C	SSK22	P25390	1331 aa	Predicted RBP	3.74	□□□□□ -1.81
NUP159	YIL115C	YKL063C	P35725	167 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	MIP6	P38760	659 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	AKR1	P39010	764 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	LSC2	P53312	427 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	DCP2	P53550	970 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	VTC3	Q02725	835 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	IWR1	Q07532	353 aa	Predicted RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	NEW1	Q08972	1196 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	PEP1	P32319	1579 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	RPN13	O13563	156 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	HIS3	P06633	220 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	CLN1	P20437	546 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	VPS1	P21576	704 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	PRP22	P24384	1145 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	OCA4	P25366	362 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	URA1	P28272	314 aa	Predicted RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	YBR242W	P38331	238 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	MDJ2	P42834	146 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	GLG2	P47011	380 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	PIB2	P53191	635 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	RSC4	Q02206	625 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	SAS4	Q04003	481 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	SSQ1	Q05931	657 aa	Predicted RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	ABP140	Q08641	628 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	ACM1	Q08981	209 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	NCA2	Q12374	616 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	YBL113C	Q7M4S9	792 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	VCX1	Q99385	411 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	CCP1	P00431	361 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	PET494	P07390	489 aa	Predicted RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	THR1	P17423	357 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	HSP60	P19882	572 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	GPI10	P30777	616 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	MRS6	P32864	603 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	TYS1	P36421	394 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	CDC27	P38042	758 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	GEM1	P39722	662 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	ALO1	P54783	526 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	TFB3	Q03290	321 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	MRX10	Q05648	414 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	JIP5	Q06214	492 aa	Predicted RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	OSW1	Q08692	278 aa		3.73	□□□□□ -1.81
NUP159	YIL115C	WRS1	Q12109	432 aa	Known RBP	3.73	□□□□□ -1.81
NUP159	YIL115C	CDC31	P06704	161 aa	Known RBP	3.72	□□□□□ -1.81
NUP159	YIL115C	KRE2	P27809	442 aa		3.72	□□□□□ -1.81
NUP159	YIL115C	HXT3	P32466	567 aa	Known RBP	3.72	□□□□□ -1.81
NUP159	YIL115C	YRO2	P38079	344 aa		3.72	□□□□□ -1.81
NUP159	YIL115C	FRT2	P39734	528 aa		3.72	□□□□□ -1.81
NUP159	YIL115C	GCV2	P49095	1034 aa		3.72	□□□□□ -1.81
NUP159	YIL115C	MAL11	P53048	616 aa		3.72	□□□□□ -1.81
NUP159	YIL115C	ZRG17	P53735	605 aa		3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms