RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C RPA49Q01080 415 aaPredicted RBP8.19□□□□□ -1.1
SNP1YIL061C EEB1Q02891 456 aa8.19□□□□□ -1.1
SNP1YIL061C PPM1Q04081 328 aa8.19□□□□□ -1.1
SNP1YIL061C GYL1Q04322 720 aa8.19□□□□□ -1.1
SNP1YIL061C OSW2Q12202 724 aa8.19□□□□□ -1.1
SNP1YIL061C GIS3Q12418 502 aa8.19□□□□□ -1.1
SNP1YIL061C HVG1P0CE11 249 aa8.18□□□□□ -1.1
SNP1YIL061C CDC42P19073 191 aa8.18□□□□□ -1.1
SNP1YIL061C YUR1P26725 428 aa8.18□□□□□ -1.1
SNP1YIL061C OXP1P28273 1286 aa8.18□□□□□ -1.1
SNP1YIL061C PTC4P38089 393 aa8.18□□□□□ -1.1
SNP1YIL061C EAF5P39995 279 aa8.18□□□□□ -1.1
SNP1YIL061C LCP5P40079 357 aaPredicted RBP8.18□□□□□ -1.1
SNP1YIL061C YTA12P40341 825 aa8.18□□□□□ -1.1
SNP1YIL061C CTK3P46963 296 aaPredicted RBP8.18□□□□□ -1.1
SNP1YIL061C RPC17P47076 161 aa8.18□□□□□ -1.1
SNP1YIL061C RPS7BP48164 190 aaKnown RBP8.18□□□□□ -1.1
SNP1YIL061C CLA4P48562 842 aa8.18□□□□□ -1.1
SNP1YIL061C ASN1P49089 572 aaKnown RBP8.18□□□□□ -1.1
SNP1YIL061C ORC5P50874 479 aa8.18□□□□□ -1.1
SNP1YIL061C SCY1P53009 804 aa8.18□□□□□ -1.1
SNP1YIL061C CUL3P53202 744 aa8.18□□□□□ -1.1
SNP1YIL061C UTP13Q05946 817 aaKnown RBP8.18□□□□□ -1.1
SNP1YIL061C ECM7Q06200 448 aa8.18□□□□□ -1.1
SNP1YIL061C IWR1Q07532 353 aaPredicted RBP8.18□□□□□ -1.1
SNP1YIL061C GPI13Q07830 1017 aa8.18□□□□□ -1.1
SNP1YIL061C TY3A-GQ12173 290 aa8.18□□□□□ -1.1
SNP1YIL061C RIO1Q12196 484 aaKnown RBP8.18□□□□□ -1.1
SNP1YIL061C SPO21Q12411 609 aa8.18□□□□□ -1.1
SNP1YIL061C ZRT2Q12436 422 aa8.18□□□□□ -1.1
SNP1YIL061C TRM11Q12463 433 aa8.18□□□□□ -1.1
SNP1YIL061C TY3A-IQ99219 290 aa8.18□□□□□ -1.1
SNP1YIL061C YLR462WO13556 202 aa8.17□□□□□ -1.1
SNP1YIL061C RPS3P05750 240 aaKnown RBP8.17□□□□□ -1.1
SNP1YIL061C SPT2P06843 333 aaPredicted RBP8.17□□□□□ -1.1
SNP1YIL061C KIN82P25341 720 aa8.17□□□□□ -1.1
SNP1YIL061C IRE1P32361 1115 aa8.17□□□□□ -1.1
SNP1YIL061C SWI3P32591 825 aa8.17□□□□□ -1.1
SNP1YIL061C CSG2P35206 410 aa8.17□□□□□ -1.1
SNP1YIL061C LAS1P36146 502 aaPredicted RBP8.17□□□□□ -1.1
SNP1YIL061C BSD2P38356 321 aa8.17□□□□□ -1.1
SNP1YIL061C MMS21P38632 267 aa8.17□□□□□ -1.1
SNP1YIL061C YHL049CP38722 271 aa8.17□□□□□ -1.1
SNP1YIL061C YEL075CP39972 122 aa8.17□□□□□ -1.1
SNP1YIL061C FTR1P40088 404 aa8.17□□□□□ -1.1
SNP1YIL061C YER189WP40104 122 aa8.17□□□□□ -1.1
SNP1YIL061C YFL064CP43540 174 aa8.17□□□□□ -1.1
SNP1YIL061C PHO86P46956 311 aa8.17□□□□□ -1.1
SNP1YIL061C CPR7P47103 393 aa8.17□□□□□ -1.1
SNP1YIL061C JJJ1P53863 590 aa8.17□□□□□ -1.1
SNP1YIL061C APL5Q08951 932 aaKnown RBP8.17□□□□□ -1.1
SNP1YIL061C YBL111CQ3E7Y5 667 aa8.17□□□□□ -1.1
SNP1YIL061C NAT1P12945 854 aaKnown RBP8.16□□□□□ -1.1
SNP1YIL061C DAL2P25335 343 aa8.16□□□□□ -1.1
SNP1YIL061C ECM32P32644 1121 aaKnown RBP8.16□□□□□ -1.1
SNP1YIL061C OLA1P38219 394 aaKnown RBP8.16□□□□□ -1.1
SNP1YIL061C HIS2P38635 335 aa8.16□□□□□ -1.1
SNP1YIL061C SPC72P39723 622 aa8.16□□□□□ -1.1
SNP1YIL061C YMR1P47147 688 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
SNP1YIL061C YGR111WP53265 400 aa8.16□□□□□ -1.1
SNP1YIL061C YMR187CQ03236 431 aa8.16□□□□□ -1.1
SNP1YIL061C JIP4Q03361 876 aa8.16□□□□□ -1.1
SNP1YIL061C TDA9Q04545 1251 aa8.16□□□□□ -1.1
SNP1YIL061C YDR222WQ04925 415 aa8.16□□□□□ -1.1
SNP1YIL061C RGA2Q06407 1009 aa8.16□□□□□ -1.1
SNP1YIL061C MSC6Q08818 692 aaKnown RBP8.16□□□□□ -1.1
SNP1YIL061C YLL058WQ12198 575 aa8.16□□□□□ -1.1
SNP1YIL061C IME1P21190 360 aa8.15□□□□□ -1.1
SNP1YIL061C RNR1P21524 888 aaKnown RBP8.15□□□□□ -1.1
SNP1YIL061C RGT1P32862 1170 aa8.15□□□□□ -1.1
SNP1YIL061C TIM23P32897 222 aa8.15□□□□□ -1.1
SNP1YIL061C ASH1P34233 588 aa8.15□□□□□ -1.1
SNP1YIL061C MRX3P38172 270 aa8.15□□□□□ -1.1
SNP1YIL061C RRT2P38332 387 aa8.15□□□□□ -1.1
SNP1YIL061C DAS1P47005 663 aa8.15□□□□□ -1.1
SNP1YIL061C BRO1P48582 844 aa8.15□□□□□ -1.1
SNP1YIL061C SCS3P53012 380 aa8.15□□□□□ -1.1
SNP1YIL061C RIM8P53179 542 aa8.15□□□□□ -1.1
SNP1YIL061C TBF1Q02457 562 aa8.15□□□□□ -1.1
SNP1YIL061C RNT1Q02555 471 aa8.15□□□□□ -1.1
SNP1YIL061C MTG1Q03151 367 aaPredicted RBP8.15□□□□□ -1.1
SNP1YIL061C YDR090CQ03193 310 aa8.15□□□□□ -1.1
SNP1YIL061C ATG16Q03818 150 aa8.15□□□□□ -1.1
SNP1YIL061C ERV41Q04651 352 aa8.15□□□□□ -1.1
SNP1YIL061C STE23Q06010 1027 aa8.15□□□□□ -1.1
SNP1YIL061C SFH1Q06168 426 aa8.15□□□□□ -1.1
SNP1YIL061C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
SNP1YIL061C AIM41Q12032 185 aa8.15□□□□□ -1.1
SNP1YIL061C AI5_BETAQ9ZZX0 354 aa8.15□□□□□ -1.1
SNP1YIL061C COX11P19516 300 aaKnown RBP8.14□□□□□ -1.11
SNP1YIL061C SSA4P22202 642 aaKnown RBP8.14□□□□□ -1.11
SNP1YIL061C CAP1P28495 268 aaKnown RBP8.14□□□□□ -1.11
SNP1YIL061C TMT1P32643 299 aa8.14□□□□□ -1.11
SNP1YIL061C UBC6P33296 250 aaPredicted RBP8.14□□□□□ -1.11
SNP1YIL061C NCL1P38205 684 aaKnown RBP8.14□□□□□ -1.11
SNP1YIL061C SPP381P38282 291 aaPredicted RBP8.14□□□□□ -1.11
SNP1YIL061C RGD1P38339 666 aa8.14□□□□□ -1.11
SNP1YIL061C GUA1P38625 525 aaKnown RBP8.14□□□□□ -1.11
SNP1YIL061C DYS1P38791 387 aa8.14□□□□□ -1.11
SNP1YIL061C VPS41P38959 992 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 698.7 ms