RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W BDH2P39713 417 aa2.77□□□□□ -1.97
YCK3YER123W UBC11P52492 156 aa2.77□□□□□ -1.97
YCK3YER123W ASM4Q05166 528 aa2.77□□□□□ -1.97
YCK3YER123W SLK19Q08581 821 aaKnown RBP2.77□□□□□ -1.97
YCK3YER123W ERG11P10614 530 aa2.76□□□□□ -1.97
YCK3YER123W PPH3P32345 308 aa2.76□□□□□ -1.97
YCK3YER123W KRI1P42846 591 aaKnown RBP2.76□□□□□ -1.97
YCK3YER123W POL32P47110 350 aa2.76□□□□□ -1.97
YCK3YER123W HDA1P53973 706 aa2.76□□□□□ -1.97
YCK3YER123W ADE8P04161 214 aa2.75□□□□□ -1.97
YCK3YER123W ABD1P32783 436 aaPredicted RBP2.75□□□□□ -1.97
YCK3YER123W HRB1P38922 454 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
YCK3YER123W ARG2P40360 574 aa2.75□□□□□ -1.97
YCK3YER123W HOS4P40480 1083 aa2.75□□□□□ -1.97
YCK3YER123W CTR1P49573 406 aa2.75□□□□□ -1.97
YCK3YER123W DNA2P38859 1522 aa2.75□□□□□ -1.97
YCK3YER123W HIR1P32479 840 aa2.74□□□□□ -1.97
YCK3YER123W PET112P33893 541 aa2.74□□□□□ -1.97
YCK3YER123W REV7P38927 245 aa2.74□□□□□ -1.97
YCK3YER123W PZF1P39933 429 aa2.74□□□□□ -1.97
YCK3YER123W UBC9P50623 157 aaPredicted RBP2.74□□□□□ -1.97
YCK3YER123W ATG11Q12527 1178 aa2.74□□□□□ -1.97
YCK3YER123W RPS9AO13516 197 aaKnown RBP2.74□□□□□ -1.97
YCK3YER123W YLR415CO13578 112 aa2.74□□□□□ -1.97
YCK3YER123W NOP1P15646 327 aaKnown RBP2.74□□□□□ -1.97
YCK3YER123W URA1P28272 314 aaPredicted RBP2.74□□□□□ -1.97
YCK3YER123W AFR1P33304 620 aa2.74□□□□□ -1.97
YCK3YER123W SLD2P34252 453 aa2.74□□□□□ -1.97
YCK3YER123W MUS81Q04149 632 aaPredicted RBP2.74□□□□□ -1.97
YCK3YER123W YDR306CQ06640 478 aa2.74□□□□□ -1.97
YCK3YER123W SPC29P33419 253 aa2.73□□□□□ -1.97
YCK3YER123W YPL068CQ02749 293 aa2.73□□□□□ -1.97
YCK3YER123W VPS16Q03308 798 aa2.73□□□□□ -1.97
YCK3YER123W TAF7Q05021 590 aa2.73□□□□□ -1.97
YCK3YER123W TGL5Q12043 749 aa2.73□□□□□ -1.97
YCK3YER123W NUP1P20676 1076 aa2.72□□□□□ -1.97
YCK3YER123W SBA1P28707 216 aaKnown RBP2.72□□□□□ -1.97
YCK3YER123W YRO2P38079 344 aa2.72□□□□□ -1.97
YCK3YER123W UBS1P38290 277 aa2.72□□□□□ -1.97
YCK3YER123W CCM1P48237 864 aaPredicted RBP2.72□□□□□ -1.97
YCK3YER123W SEN54Q02825 467 aaPredicted RBP2.72□□□□□ -1.97
YCK3YER123W SIR3P06701 978 aa2.71□□□□□ -1.98
YCK3YER123W PYC1P11154 1178 aaKnown RBP2.71□□□□□ -1.98
YCK3YER123W ATE1P16639 503 aa2.71□□□□□ -1.98
YCK3YER123W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
YCK3YER123W DUS1P53759 423 aaKnown RBP2.71□□□□□ -1.98
YCK3YER123W GIS2P53849 153 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
YCK3YER123W AGP1P25376 633 aa2.7□□□□□ -1.98
YCK3YER123W AAR2P32357 355 aaPredicted RBP2.7□□□□□ -1.98
YCK3YER123W MNR2P35724 969 aa2.7□□□□□ -1.98
YCK3YER123W MUP3P38734 546 aa2.7□□□□□ -1.98
YCK3YER123W SAK1P38990 1142 aa2.7□□□□□ -1.98
YCK3YER123W BAP3P41815 604 aa2.7□□□□□ -1.98
YCK3YER123W GEP3Q08622 556 aa2.7□□□□□ -1.98
YCK3YER123W YKL033W-AQ86ZR7 236 aa2.7□□□□□ -1.98
YCK3YER123W CCR4P31384 837 aaKnown RBP2.7□□□□□ -1.98
YCK3YER123W SIT1P39980 628 aa2.7□□□□□ -1.98
YCK3YER123W PFA3P42836 336 aa2.7□□□□□ -1.98
YCK3YER123W SPA2P23201 1466 aaKnown RBP2.69□□□□□ -1.98
YCK3YER123W PHR1P05066 565 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
YCK3YER123W APN1P22936 367 aa2.68□□□□□ -1.98
YCK3YER123W SIC1P38634 284 aa2.68□□□□□ -1.98
YCK3YER123W ATG4P53867 494 aa2.68□□□□□ -1.98
YCK3YER123W HAL9Q12180 1030 aa2.68□□□□□ -1.98
YCK3YER123W RPA135P22138 1203 aaKnown RBP2.67□□□□□ -1.98
YCK3YER123W CCT3P39077 534 aaKnown RBP2.67□□□□□ -1.98
YCK3YER123W SSY5P47002 699 aa2.67□□□□□ -1.98
YCK3YER123W TPO2P53283 614 aa2.67□□□□□ -1.98
YCK3YER123W STP1Q00947 519 aa2.67□□□□□ -1.98
YCK3YER123W FMP30Q02883 468 aa2.66□□□□□ -1.98
YCK3YER123W CYS3P31373 394 aaKnown RBP2.66□□□□□ -1.98
YCK3YER123W VBA5P36172 582 aa2.66□□□□□ -1.98
YCK3YER123W YBR259WP38338 688 aa2.66□□□□□ -1.98
YCK3YER123W FAA4P47912 694 aaKnown RBP2.66□□□□□ -1.98
YCK3YER123W PAN2P53010 1115 aaPredicted RBP2.66□□□□□ -1.98
YCK3YER123W BUL2Q03758 920 aaKnown RBP2.66□□□□□ -1.98
YCK3YER123W LCD1Q04377 747 aa2.66□□□□□ -1.98
YCK3YER123W REC104P33323 182 aa2.65□□□□□ -1.99
YCK3YER123W ERT1P38140 529 aa2.65□□□□□ -1.99
YCK3YER123W SFB3P38810 929 aa2.65□□□□□ -1.99
YCK3YER123W TOK1P40310 691 aa2.65□□□□□ -1.99
YCK3YER123W YML020WQ03722 664 aa2.65□□□□□ -1.99
YCK3YER123W SHE9Q04172 456 aa2.65□□□□□ -1.99
YCK3YER123W GAD1Q04792 585 aa2.65□□□□□ -1.99
YCK3YER123W RRP15Q06511 250 aaPredicted RBP2.65□□□□□ -1.99
YCK3YER123W FAL1Q12099 399 aaKnown RBP2.65□□□□□ -1.99
YCK3YER123W ULP2P40537 1034 aaPredicted RBP2.64□□□□□ -1.99
YCK3YER123W IRC8P47046 822 aa2.64□□□□□ -1.99
YCK3YER123W TEX1P53851 422 aaKnown RBP2.64□□□□□ -1.99
YCK3YER123W RSC3Q06639 885 aa2.64□□□□□ -1.99
YCK3YER123W NEW1Q08972 1196 aaKnown RBP2.64□□□□□ -1.99
YCK3YER123W MLH3Q12083 715 aa2.64□□□□□ -1.99
YCK3YER123W ASF1P32447 279 aa2.63□□□□□ -1.99
YCK3YER123W FHN1P53279 174 aa2.63□□□□□ -1.99
YCK3YER123W GDE1Q02979 1223 aa2.63□□□□□ -1.99
YCK3YER123W NOP8Q08287 484 aaPredicted RBP2.63□□□□□ -1.99
YCK3YER123W YOR022CQ12204 715 aa2.63□□□□□ -1.99
YCK3YER123W ADE5,7P07244 802 aaKnown RBP2.62□□□□□ -1.99
YCK3YER123W HEM3P28789 327 aa2.62□□□□□ -1.99
YCK3YER123W CCT4P39078 528 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms