RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	YMR084W	A2P2R3	262 aa		5.14	□□□□□ -1.59
UBC8	YEL012W	BET3	P36149	193 aa		5.14	□□□□□ -1.59
UBC8	YEL012W	ATG14	P38270	344 aa		5.14	□□□□□ -1.59
UBC8	YEL012W	ERP6	P53198	216 aa		5.14	□□□□□ -1.59
UBC8	YEL012W	BRE5	P53741	515 aa	Known RBP	5.14	□□□□□ -1.59
UBC8	YEL012W	INM2	Q05533	292 aa		5.14	□□□□□ -1.59
UBC8	YEL012W	EAF1	Q06337	982 aa		5.14	□□□□□ -1.59
UBC8	YEL012W	YDL144C	Q07589	356 aa		5.14	□□□□□ -1.59
UBC8	YEL012W	YPL260W	Q08977	551 aa		5.14	□□□□□ -1.59
UBC8	YEL012W	HIP1	P06775	603 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	PHO8	P11491	566 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	GAL11	P19659	1081 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	DBP2	P24783	546 aa	Known RBP	5.13	□□□□□ -1.59
UBC8	YEL012W	CDC60	P26637	1090 aa	Known RBP	5.13	□□□□□ -1.59
UBC8	YEL012W	SFA1	P32771	386 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	SMY2	P32909	740 aa	Known RBP	5.13	□□□□□ -1.59
UBC8	YEL012W	MDL2	P33311	773 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	YBL028C	P38202	106 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	MCX1	P38323	520 aa	Predicted RBP	5.13	□□□□□ -1.59
UBC8	YEL012W	HSE1	P38753	452 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	GPB2	P39717	880 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	AFG3	P39925	761 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	NUG1	P40010	520 aa	Known RBP	5.13	□□□□□ -1.59
UBC8	YEL012W	ALR2	P43553	858 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
UBC8	YEL012W	NET1	P47035	1189 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	YNR014W	P53719	212 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	CFT2	Q12102	859 aa	Predicted RBP	5.13	□□□□□ -1.59
UBC8	YEL012W	PSF3	Q12146	194 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	SPO21	Q12411	609 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	YDR034W-B	Q6Q5X2	51 aa		5.13	□□□□□ -1.59
UBC8	YEL012W	FAB1	P34756	2278 aa		5.12	□□□□□ -1.59
UBC8	YEL012W	AI3	P03877	415 aa		5.12	□□□□□ -1.59
UBC8	YEL012W	SEC18	P18759	758 aa	Known RBP	5.12	□□□□□ -1.59
UBC8	YEL012W	ARE1	P25628	610 aa		5.12	□□□□□ -1.59
UBC8	YEL012W	OCT1	P35999	772 aa		5.12	□□□□□ -1.59
UBC8	YEL012W	NNK1	P36003	928 aa		5.12	□□□□□ -1.59
UBC8	YEL012W	MCD4	P36051	919 aa		5.12	□□□□□ -1.59
UBC8	YEL012W	GGA2	P38817	585 aa	Known RBP	5.12	□□□□□ -1.59
UBC8	YEL012W	NMD3	P38861	518 aa	Known RBP	5.12	□□□□□ -1.59
UBC8	YEL012W	YJL045W	P47052	634 aa		5.12	□□□□□ -1.59
UBC8	YEL012W	ALT1	P52893	592 aa		5.12	□□□□□ -1.59
UBC8	YEL012W	EAR1	Q03212	550 aa		5.12	□□□□□ -1.59
UBC8	YEL012W	TDA6	Q06466	467 aa		5.12	□□□□□ -1.59
UBC8	YEL012W	ECM29	P38737	1868 aa		5.11	□□□□□ -1.59
UBC8	YEL012W	RPL11A	P0C0W9	174 aa	Known RBP	5.11	□□□□□ -1.59
UBC8	YEL012W	KRS1	P15180	591 aa	Known RBP	5.11	□□□□□ -1.59
UBC8	YEL012W	PRP9	P19736	530 aa	Known RBP	5.11	□□□□□ -1.59
UBC8	YEL012W	NFS1	P25374	497 aa		5.11	□□□□□ -1.59
UBC8	YEL012W	UIP5	P36137	443 aa		5.11	□□□□□ -1.59
UBC8	YEL012W	YNL193W	P53870	558 aa		5.11	□□□□□ -1.59
UBC8	YEL012W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
UBC8	YEL012W	SPP382	Q06411	708 aa	Predicted RBP	5.11	□□□□□ -1.59
UBC8	YEL012W	ECM30	Q06673	1274 aa		5.11	□□□□□ -1.59
UBC8	YEL012W	YLR125W	Q12138	136 aa		5.11	□□□□□ -1.59
UBC8	YEL012W	RPL11B	Q3E757	174 aa	Predicted RBP	5.11	□□□□□ -1.59
UBC8	YEL012W	HBN1	Q96VH4	193 aa		5.11	□□□□□ -1.59
UBC8	YEL012W	MET6	P05694	767 aa	Known RBP	5.1	□□□□□ -1.59
UBC8	YEL012W	FPR3	P38911	411 aa	Known RBP	5.1	□□□□□ -1.59
UBC8	YEL012W	SNF7	P39929	240 aa	Known RBP	5.1	□□□□□ -1.59
UBC8	YEL012W	MXR1	P40029	184 aa		5.1	□□□□□ -1.59
UBC8	YEL012W	YFL054C	P43549	646 aa		5.1	□□□□□ -1.59
UBC8	YEL012W	MAL11	P53048	616 aa		5.1	□□□□□ -1.59
UBC8	YEL012W	CSI1	Q04368	295 aa		5.1	□□□□□ -1.59
UBC8	YEL012W	RPN7	Q06103	429 aa	Known RBP	5.1	□□□□□ -1.59
UBC8	YEL012W	PUS7	Q08647	676 aa	Known RBP	5.1	□□□□□ -1.59
UBC8	YEL012W	SUT2	Q12286	268 aa		5.1	□□□□□ -1.59
UBC8	YEL012W	AHC1	Q12433	566 aa		5.1	□□□□□ -1.59
UBC8	YEL012W	RPS4A	P0CX35	261 aa	Known RBP	5.09	□□□□□ -1.59
UBC8	YEL012W	RPS4B	P0CX36	261 aa	Known RBP	5.09	□□□□□ -1.59
UBC8	YEL012W	TOP3	P13099	656 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	SNF5	P18480	905 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	YCK2	P23292	546 aa	Known RBP	5.09	□□□□□ -1.59
UBC8	YEL012W	BCS1	P32839	456 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	YKL151C	P36059	337 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	MNN1	P39106	762 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	RPN3	P40016	523 aa	Known RBP	5.09	□□□□□ -1.59
UBC8	YEL012W	PRY1	P47032	299 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	YPL034W	Q03083	165 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	YDL124W	Q07551	312 aa	Known RBP	5.09	□□□□□ -1.59
UBC8	YEL012W	ICL2	Q12031	575 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	TY3A-G	Q12173	290 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	YDR215C	Q12240	137 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	RRI2	Q12348	645 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	YPR053C	Q6Q5F3	151 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	TY3A-I	Q99219	290 aa		5.09	□□□□□ -1.59
UBC8	YEL012W	SUI2	P20459	304 aa	Known RBP	5.08	□□□□□ -1.6
UBC8	YEL012W	RSC6	P25632	483 aa		5.08	□□□□□ -1.6
UBC8	YEL012W	AFR1	P33304	620 aa		5.08	□□□□□ -1.6
UBC8	YEL012W	SLA2	P33338	968 aa		5.08	□□□□□ -1.6
UBC8	YEL012W	CCC2	P38995	1004 aa		5.08	□□□□□ -1.6
UBC8	YEL012W	LYS14	P40971	790 aa		5.08	□□□□□ -1.6
UBC8	YEL012W	HUL4	P40985	892 aa		5.08	□□□□□ -1.6
UBC8	YEL012W	CCT8	P47079	568 aa	Known RBP	5.08	□□□□□ -1.6
UBC8	YEL012W	ARI1	P53111	347 aa	Known RBP	5.08	□□□□□ -1.6
UBC8	YEL012W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
UBC8	YEL012W	BUL2	Q03758	920 aa	Known RBP	5.08	□□□□□ -1.6
UBC8	YEL012W	TPP1	Q03796	238 aa		5.08	□□□□□ -1.6
UBC8	YEL012W	RCL1	Q08096	367 aa	Predicted RBP	5.08	□□□□□ -1.6
UBC8	YEL012W	HRK1	Q08732	759 aa	Known RBP	5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 150.6 ms