RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C CHA4P43634 648 aa6.39□□□□□ -1.39
LSM6YDR378C YGR237CP50089 785 aa6.39□□□□□ -1.39
LSM6YDR378C UME1Q03010 460 aa6.39□□□□□ -1.39
LSM6YDR378C YDR132CQ03900 495 aa6.39□□□□□ -1.39
LSM6YDR378C GUD1Q07729 489 aa6.39□□□□□ -1.39
LSM6YDR378C GUP2Q08929 609 aa6.39□□□□□ -1.39
LSM6YDR378C THI21Q08975 551 aa6.39□□□□□ -1.39
LSM6YDR378C NUP145P49687 1317 aa6.39□□□□□ -1.39
LSM6YDR378C CDC6P09119 513 aa6.38□□□□□ -1.39
LSM6YDR378C CDC20P26309 610 aa6.38□□□□□ -1.39
LSM6YDR378C PCM1P38628 557 aaKnown RBP6.38□□□□□ -1.39
LSM6YDR378C YHR078WP38799 552 aa6.38□□□□□ -1.39
LSM6YDR378C CTF8P38877 133 aa6.38□□□□□ -1.39
LSM6YDR378C YEN1P40028 759 aa6.38□□□□□ -1.39
LSM6YDR378C AIM14P53109 570 aa6.38□□□□□ -1.39
LSM6YDR378C NPY1P53164 384 aa6.38□□□□□ -1.39
LSM6YDR378C RIM8P53179 542 aa6.38□□□□□ -1.39
LSM6YDR378C YAP6Q03935 383 aa6.38□□□□□ -1.39
LSM6YDR378C ATG33Q06485 197 aa6.38□□□□□ -1.39
LSM6YDR378C CDA2Q06703 312 aa6.38□□□□□ -1.39
LSM6YDR378C TYS1P36421 394 aaKnown RBP6.37□□□□□ -1.39
LSM6YDR378C SSY5P47002 699 aa6.37□□□□□ -1.39
LSM6YDR378C ZIP2P53061 704 aa6.37□□□□□ -1.39
LSM6YDR378C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39 RIP-Chip
LSM6YDR378C PZF1P39933 429 aa6.36□□□□□ -1.39
LSM6YDR378C AVT1P47082 602 aa6.36□□□□□ -1.39
LSM6YDR378C NCS6P53088 359 aa6.36□□□□□ -1.39
LSM6YDR378C RGA2Q06407 1009 aa6.36□□□□□ -1.39
LSM6YDR378C HMG1P12683 1054 aa6.35□□□□□ -1.39
LSM6YDR378C TOD6P34219 525 aa6.35□□□□□ -1.39
LSM6YDR378C PLB1P39105 664 aa6.35□□□□□ -1.39
LSM6YDR378C YDR338CQ05497 695 aa6.35□□□□□ -1.39
LSM6YDR378C YLR224WQ05947 369 aa6.35□□□□□ -1.39
LSM6YDR378C FAP7Q12055 197 aaPredicted RBP6.35□□□□□ -1.39
LSM6YDR378C SWM1Q12379 170 aa6.35□□□□□ -1.39
LSM6YDR378C SSB1P11484 613 aaKnown RBP6.34□□□□□ -1.39
LSM6YDR378C PRP6P19735 899 aaPredicted RBP6.34□□□□□ -1.39
LSM6YDR378C STE14P32584 239 aa6.34□□□□□ -1.39
LSM6YDR378C SAK1P38990 1142 aa6.34□□□□□ -1.39
LSM6YDR378C SSB2P40150 613 aaKnown RBP6.34□□□□□ -1.39
LSM6YDR378C BNA2P47125 453 aa6.34□□□□□ -1.39
LSM6YDR378C MTR3P48240 250 aaPredicted RBP6.34□□□□□ -1.39
LSM6YDR378C HFD1Q04458 532 aa6.34□□□□□ -1.39
LSM6YDR378C RPN7Q06103 429 aaKnown RBP6.34□□□□□ -1.39
LSM6YDR378C NPC2Q12408 173 aa6.34□□□□□ -1.39
LSM6YDR378C NGG1P32494 702 aa6.33□□□□□ -1.4
LSM6YDR378C PRP19P32523 503 aaKnown RBP6.33□□□□□ -1.4
LSM6YDR378C FLR1P38124 548 aa6.33□□□□□ -1.4
LSM6YDR378C CKB2P38930 258 aa6.33□□□□□ -1.4
LSM6YDR378C UBC9P50623 157 aaPredicted RBP6.33□□□□□ -1.4
LSM6YDR378C YLR358CO13565 187 aa6.32□□□□□ -1.4
LSM6YDR378C RNQ1P25367 405 aa6.32□□□□□ -1.4
LSM6YDR378C YJR096WP47137 282 aa6.32□□□□□ -1.4
LSM6YDR378C MTQ2Q03920 221 aaPredicted RBP6.32□□□□□ -1.4
LSM6YDR378C MIH1P23748 554 aa6.31□□□□□ -1.4
LSM6YDR378C ELM1P32801 640 aa6.31□□□□□ -1.4
LSM6YDR378C YKR051WP36142 418 aa6.31□□□□□ -1.4
LSM6YDR378C VHR1P40522 640 aa6.31□□□□□ -1.4
LSM6YDR378C NRD1P53617 575 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
LSM6YDR378C PEX19Q07418 342 aa6.31□□□□□ -1.4
LSM6YDR378C KCS1Q12494 1050 aa6.31□□□□□ -1.4
LSM6YDR378C YLR149CQ99296 730 aa6.31□□□□□ -1.4
LSM6YDR378C Q0142Q9ZZW4 58 aa6.31□□□□□ -1.4
LSM6YDR378C PRE10P21242 288 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
LSM6YDR378C CAD1P24813 409 aaKnown RBP6.3□□□□□ -1.4
LSM6YDR378C CCR4P31384 837 aaKnown RBP6.3□□□□□ -1.4
LSM6YDR378C PKH1Q03407 766 aa6.3□□□□□ -1.4
LSM6YDR378C MUS81Q04149 632 aaPredicted RBP6.3□□□□□ -1.4
LSM6YDR378C SEC21P32074 935 aaKnown RBP6.29□□□□□ -1.4
LSM6YDR378C MSS4P38994 779 aa6.29□□□□□ -1.4
LSM6YDR378C GPG1P53130 126 aa6.29□□□□□ -1.4
LSM6YDR378C YBP2P53169 641 aa6.29□□□□□ -1.4
LSM6YDR378C ASI2P53895 289 aa6.29□□□□□ -1.4
LSM6YDR378C ORC4P54791 529 aa6.29□□□□□ -1.4
LSM6YDR378C TOM20P35180 183 aa6.28□□□□□ -1.4
LSM6YDR378C YKR018CP36114 725 aa6.28□□□□□ -1.4
LSM6YDR378C TDA3P38758 523 aa6.28□□□□□ -1.4
LSM6YDR378C GPP1P41277 250 aaKnown RBP6.28□□□□□ -1.4
LSM6YDR378C PFA3P42836 336 aa6.28□□□□□ -1.4
LSM6YDR378C TMA10Q06177 86 aa6.28□□□□□ -1.4
LSM6YDR378C YTM1Q12024 460 aaPredicted RBP6.28□□□□□ -1.4
LSM6YDR378C KAR4P25583 335 aa6.27□□□□□ -1.41
LSM6YDR378C LST4P34239 828 aa6.27□□□□□ -1.41
LSM6YDR378C GZF3P42944 551 aaKnown RBP6.27□□□□□ -1.41
LSM6YDR378C BFA1P47113 574 aa6.27□□□□□ -1.41
LSM6YDR378C PCL10P53124 433 aa6.27□□□□□ -1.41
LSM6YDR378C TUB3P09734 445 aaKnown RBP6.26□□□□□ -1.41
LSM6YDR378C STE11P23561 717 aa6.26□□□□□ -1.41
LSM6YDR378C THI80P35202 319 aa6.26□□□□□ -1.41
LSM6YDR378C RET2P43621 546 aa6.26□□□□□ -1.41
LSM6YDR378C YGR153WP48238 217 aa6.26□□□□□ -1.41
LSM6YDR378C MNN10P50108 393 aaKnown RBP6.26□□□□□ -1.41
LSM6YDR378C MCM6P53091 1017 aaKnown RBP6.26□□□□□ -1.41
LSM6YDR378C TRM11Q12463 433 aa6.26□□□□□ -1.41
LSM6YDR378C YLR415CO13578 112 aa6.25□□□□□ -1.41
LSM6YDR378C MNN4P36044 1178 aa6.25□□□□□ -1.41
LSM6YDR378C MIP6P38760 659 aaKnown RBP6.25□□□□□ -1.41
LSM6YDR378C EXG2P52911 562 aa6.25□□□□□ -1.41
LSM6YDR378C GPD1Q00055 391 aaKnown RBP6.25□□□□□ -1.41
LSM6YDR378C IOC4Q04213 475 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms