RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	YPL062W	Q02781	134 aa		7.02	□□□□□ -1.29
TRP1	YDR007W	RSM24	Q03976	319 aa		7.02	□□□□□ -1.29
TRP1	YDR007W	YOR022C	Q12204	715 aa		7.02	□□□□□ -1.29
TRP1	YDR007W	YDR215C	Q12240	137 aa		7.02	□□□□□ -1.29
TRP1	YDR007W	HSF1	P10961	833 aa		7.01	□□□□□ -1.29
TRP1	YDR007W	TRX2	P22803	104 aa	Known RBP	7.01	□□□□□ -1.29
TRP1	YDR007W	DPB3	P27344	201 aa		7.01	□□□□□ -1.29
TRP1	YDR007W	COQ2	P32378	372 aa		7.01	□□□□□ -1.29
TRP1	YDR007W	RPD3	P32561	433 aa		7.01	□□□□□ -1.29
TRP1	YDR007W	SRP101	P32916	621 aa		7.01	□□□□□ -1.29
TRP1	YDR007W	NIC96	P34077	839 aa		7.01	□□□□□ -1.29
TRP1	YDR007W	MNN4	P36044	1178 aa		7.01	□□□□□ -1.29
TRP1	YDR007W	TRZ1	P36159	838 aa	Predicted RBP	7.01	□□□□□ -1.29
TRP1	YDR007W	BIT2	P38346	545 aa		7.01	□□□□□ -1.29
TRP1	YDR007W	MET14	Q02196	202 aa		7.01	□□□□□ -1.29
TRP1	YDR007W	YMR187C	Q03236	431 aa		7.01	□□□□□ -1.29
TRP1	YDR007W	RPN7	Q06103	429 aa	Known RBP	7.01	□□□□□ -1.29
TRP1	YDR007W	CHS2	P14180	963 aa		7	□□□□□ -1.29
TRP1	YDR007W	YKR051W	P36142	418 aa		7	□□□□□ -1.29
TRP1	YDR007W	ABZ1	P37254	787 aa	Predicted RBP	7	□□□□□ -1.29
TRP1	YDR007W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	7	□□□□□ -1.29	not detected
TRP1	YDR007W	EMP65	P40085	556 aa		7	□□□□□ -1.29
TRP1	YDR007W	BNA2	P47125	453 aa		7	□□□□□ -1.29
TRP1	YDR007W	SPC105	P53148	917 aa		7	□□□□□ -1.29
TRP1	YDR007W	PTA1	Q01329	785 aa	Predicted RBP	7	□□□□□ -1.29
TRP1	YDR007W	MSC2	Q03455	724 aa		7	□□□□□ -1.29
TRP1	YDR007W	SSY1	Q03770	852 aa		7	□□□□□ -1.29
TRP1	YDR007W	PHM6	Q05637	104 aa		7	□□□□□ -1.29
TRP1	YDR007W	YPL277C	Q08989	487 aa		7	□□□□□ -1.29
TRP1	YDR007W	GAL1	P04385	528 aa		6.99	□□□□□ -1.29
TRP1	YDR007W	YCK2	P23292	546 aa	Known RBP	6.99	□□□□□ -1.29
TRP1	YDR007W	YIL108W	P40483	696 aa	Known RBP	6.99	□□□□□ -1.29
TRP1	YDR007W	SLD3	P53135	668 aa		6.99	□□□□□ -1.29
TRP1	YDR007W	YGR012W	P53206	393 aa		6.99	□□□□□ -1.29
TRP1	YDR007W	UBX4	P54730	416 aa		6.99	□□□□□ -1.29
TRP1	YDR007W	SKY1	Q03656	742 aa		6.99	□□□□□ -1.29
TRP1	YDR007W	YHM2	Q04013	314 aa		6.99	□□□□□ -1.29
TRP1	YDR007W	HAL9	Q12180	1030 aa		6.99	□□□□□ -1.29
TRP1	YDR007W	HSL1	P34244	1518 aa		6.99	□□□□□ -1.29
TRP1	YDR007W	PIF1	P07271	859 aa		6.98	□□□□□ -1.29
TRP1	YDR007W	PTP2	P29461	750 aa		6.98	□□□□□ -1.29
TRP1	YDR007W	HEM12	P32347	362 aa	Predicted RBP	6.98	□□□□□ -1.29
TRP1	YDR007W	HXT6	P39003	570 aa	Known RBP	6.98	□□□□□ -1.29
TRP1	YDR007W	HXT7	P39004	570 aa		6.98	□□□□□ -1.29
TRP1	YDR007W	BFA1	P47113	574 aa		6.98	□□□□□ -1.29
TRP1	YDR007W	FOL2	P51601	243 aa	Known RBP	6.98	□□□□□ -1.29
TRP1	YDR007W	ZIP2	P53061	704 aa		6.98	□□□□□ -1.29
TRP1	YDR007W	YGR021W	P53212	290 aa		6.98	□□□□□ -1.29
TRP1	YDR007W	SSL1	Q04673	461 aa	Predicted RBP	6.98	□□□□□ -1.29
TRP1	YDR007W	THI21	Q08975	551 aa		6.98	□□□□□ -1.29
TRP1	YDR007W	Q0142	Q9ZZW4	58 aa		6.98	□□□□□ -1.29
TRP1	YDR007W	PGI1	P12709	554 aa	Known RBP	6.97	□□□□□ -1.29
TRP1	YDR007W	COX11	P19516	300 aa	Known RBP	6.97	□□□□□ -1.29
TRP1	YDR007W	ADP1	P25371	1049 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	YKL133C	P36066	463 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	FLR1	P38124	548 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	POA1	P38218	177 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	RIM4	P38741	713 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	ZRG8	P40021	1076 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	ENV11	P53246	860 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	SIZ1	Q04195	904 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	CDA1	Q06702	301 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	YPR027C	Q12079	277 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	RIB2	Q12362	591 aa	Known RBP	6.97	□□□□□ -1.29
TRP1	YDR007W	YLR149C	Q99296	730 aa		6.97	□□□□□ -1.29
TRP1	YDR007W	SPT6	P23615	1451 aa	Known RBP	6.97	□□□□□ -1.29
TRP1	YDR007W	RPS21A	P0C0V8	87 aa	Known RBP	6.96	□□□□□ -1.3
TRP1	YDR007W	YKR018C	P36114	725 aa		6.96	□□□□□ -1.3
TRP1	YDR007W	MAL31	P38156	614 aa		6.96	□□□□□ -1.3
TRP1	YDR007W	PSP2	P50109	593 aa	Known RBP	6.96	□□□□□ -1.3
TRP1	YDR007W	HFI1	Q12060	488 aa		6.96	□□□□□ -1.3
TRP1	YDR007W	RRP6	Q12149	733 aa	Known RBP	6.96	□□□□□ -1.3
TRP1	YDR007W	RPS21B	Q3E754	87 aa	Known RBP	6.96	□□□□□ -1.3
TRP1	YDR007W	KCC4	P25389	1037 aa		6.95	□□□□□ -1.3
TRP1	YDR007W	PGM1	P33401	570 aa	Known RBP	6.95	□□□□□ -1.3
TRP1	YDR007W	TCB2	P48231	1178 aa		6.95	□□□□□ -1.3
TRP1	YDR007W	TAN1	P53072	289 aa	Predicted RBP	6.95	□□□□□ -1.3
TRP1	YDR007W	DUS1	P53759	423 aa	Known RBP	6.95	□□□□□ -1.3
TRP1	YDR007W	MLC2	Q06580	163 aa		6.95	□□□□□ -1.3
TRP1	YDR007W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.95	□□□□□ -1.3	not detected
TRP1	YDR007W	PHM7	Q12252	991 aa		6.95	□□□□□ -1.3
TRP1	YDR007W	SEC65	P29478	273 aa		6.94	□□□□□ -1.3
TRP1	YDR007W	YKU70	P32807	602 aa		6.94	□□□□□ -1.3
TRP1	YDR007W	OAF3	P36023	863 aa		6.94	□□□□□ -1.3
TRP1	YDR007W	KAE1	P36132	386 aa		6.94	□□□□□ -1.3
TRP1	YDR007W	PCL10	P53124	433 aa		6.94	□□□□□ -1.3
TRP1	YDR007W	PEX15	Q08215	383 aa		6.94	□□□□□ -1.3
TRP1	YDR007W	YLR122C	Q12312	125 aa		6.94	□□□□□ -1.3
TRP1	YDR007W	YPR053C	Q6Q5F3	151 aa		6.94	□□□□□ -1.3
TRP1	YDR007W	APM4	Q99186	491 aa		6.94	□□□□□ -1.3
TRP1	YDR007W	SWR1	Q05471	1514 aa		6.94	□□□□□ -1.3
TRP1	YDR007W	CMP2	P14747	604 aa		6.93	□□□□□ -1.3
TRP1	YDR007W	IES5	P40060	125 aa		6.93	□□□□□ -1.3
TRP1	YDR007W	RSC8	P43609	557 aa	Known RBP	6.93	□□□□□ -1.3
TRP1	YDR007W	YPL034W	Q03083	165 aa		6.93	□□□□□ -1.3
TRP1	YDR007W	DCS2	Q12123	353 aa		6.93	□□□□□ -1.3
TRP1	YDR007W	CHD1	P32657	1468 aa		6.92	□□□□□ -1.3
TRP1	YDR007W	GCD1	P09032	578 aa	Predicted RBP	6.92	□□□□□ -1.3
TRP1	YDR007W	FBP1	P09201	348 aa		6.92	□□□□□ -1.3
TRP1	YDR007W	PFK1	P16861	987 aa	Known RBP	6.92	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms