RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W QNS1P38795 714 aaKnown RBP2.07□□□□□ -2.08
TRM3YDL112W KEL1P38853 1164 aaKnown RBP2.07□□□□□ -2.08
TRM3YDL112W LYS14P40971 790 aa2.07□□□□□ -2.08
TRM3YDL112W TPO2P53283 614 aa2.07□□□□□ -2.08
TRM3YDL112W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
TRM3YDL112W HRK1Q08732 759 aaKnown RBP2.07□□□□□ -2.08
TRM3YDL112W UBR2Q07963 1872 aa2.07□□□□□ -2.08
TRM3YDL112W OMA1P36163 345 aa2.07□□□□□ -2.08
TRM3YDL112W PNT1P38969 423 aa2.07□□□□□ -2.08
TRM3YDL112W IOC3P43596 787 aa2.07□□□□□ -2.08
TRM3YDL112W MSH6Q03834 1242 aa2.07□□□□□ -2.08
TRM3YDL112W RSA3Q05942 220 aaKnown RBP2.07□□□□□ -2.08
TRM3YDL112W FLC1Q08967 793 aa2.07□□□□□ -2.08
TRM3YDL112W GAL11P19659 1081 aa2.07□□□□□ -2.08
TRM3YDL112W RPS7AP26786 190 aaKnown RBP2.07□□□□□ -2.08
TRM3YDL112W SFP1P32432 683 aa2.07□□□□□ -2.08
TRM3YDL112W GCD7P32502 381 aaPredicted RBP2.07□□□□□ -2.08
TRM3YDL112W PAH1P32567 862 aa2.07□□□□□ -2.08
TRM3YDL112W NUP133P36161 1157 aa2.07□□□□□ -2.08
TRM3YDL112W TIF4631P39935 952 aaKnown RBP2.07□□□□□ -2.08
TRM3YDL112W CFT2Q12102 859 aaPredicted RBP2.07□□□□□ -2.08
TRM3YDL112W YDR215CQ12240 137 aa2.07□□□□□ -2.08
TRM3YDL112W SNU66Q12420 587 aaPredicted RBP2.07□□□□□ -2.08
TRM3YDL112W RIF1P29539 1916 aa2.07□□□□□ -2.08
TRM3YDL112W FBP1P09201 348 aa2.06□□□□□ -2.08
TRM3YDL112W STE5P32917 917 aa2.06□□□□□ -2.08
TRM3YDL112W YVH1Q02256 364 aaKnown RBP2.06□□□□□ -2.08
TRM3YDL112W YPL034WQ03083 165 aa2.06□□□□□ -2.08
TRM3YDL112W SGD1Q06132 899 aa2.06□□□□□ -2.08
TRM3YDL112W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
TRM3YDL112W HEM1P09950 548 aaPredicted RBP2.06□□□□□ -2.08
TRM3YDL112W PHO8P11491 566 aa2.06□□□□□ -2.08
TRM3YDL112W TOP3P13099 656 aa2.06□□□□□ -2.08
TRM3YDL112W PFK2P16862 959 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
TRM3YDL112W MPP10P47083 593 aaKnown RBP2.06□□□□□ -2.08
TRM3YDL112W GCV2P49095 1034 aa2.06□□□□□ -2.08
TRM3YDL112W SSY1Q03770 852 aa2.06□□□□□ -2.08
TRM3YDL112W PUS7Q08647 676 aaKnown RBP2.06□□□□□ -2.08
TRM3YDL112W MDM20Q12387 796 aaKnown RBP2.06□□□□□ -2.08
TRM3YDL112W POL12P38121 705 aaPredicted RBP2.06□□□□□ -2.08
TRM3YDL112W PUS2P53167 370 aa2.06□□□□□ -2.08
TRM3YDL112W LAM4P38800 1345 aa2.06□□□□□ -2.08
TRM3YDL112W ADP1P25371 1049 aa2.05□□□□□ -2.08
TRM3YDL112W MNR2P35724 969 aa2.05□□□□□ -2.08
TRM3YDL112W SPF1P39986 1215 aaKnown RBP2.05□□□□□ -2.08
TRM3YDL112W PSF2P40359 213 aa2.05□□□□□ -2.08
TRM3YDL112W SHR5P41912 237 aa2.05□□□□□ -2.08
TRM3YDL112W VPS62P53285 467 aa2.05□□□□□ -2.08
TRM3YDL112W SKG3Q06315 1026 aa2.05□□□□□ -2.08
TRM3YDL112W NBA1Q08229 501 aaKnown RBP2.05□□□□□ -2.08
TRM3YDL112W PMA1P05030 918 aaKnown RBP2.05□□□□□ -2.08
TRM3YDL112W YCK2P23292 546 aaKnown RBP2.05□□□□□ -2.08
TRM3YDL112W BRN1P38170 754 aa2.05□□□□□ -2.08
TRM3YDL112W HSV2P50079 448 aaPredicted RBP2.05□□□□□ -2.08
TRM3YDL112W SFB2P53953 876 aa2.05□□□□□ -2.08
TRM3YDL112W RMD1Q03441 430 aa2.05□□□□□ -2.08
TRM3YDL112W SVS1Q12254 260 aa2.05□□□□□ -2.08
TRM3YDL112W GCD1P09032 578 aaPredicted RBP2.05□□□□□ -2.08
TRM3YDL112W VMA4P22203 233 aaKnown RBP2.05□□□□□ -2.08
TRM3YDL112W TSR4P25040 408 aa2.05□□□□□ -2.08
TRM3YDL112W RGT1P32862 1170 aa2.05□□□□□ -2.08
TRM3YDL112W SRP101P32916 621 aa2.05□□□□□ -2.08
TRM3YDL112W DUT1P33317 147 aa2.05□□□□□ -2.08
TRM3YDL112W YKR018CP36114 725 aa2.05□□□□□ -2.08
TRM3YDL112W KAE1P36132 386 aa2.05□□□□□ -2.08
TRM3YDL112W HNT2P49775 206 aa2.05□□□□□ -2.08
TRM3YDL112W SOL4P53315 255 aa2.05□□□□□ -2.08
TRM3YDL112W CIT1P00890 479 aa2.05□□□□□ -2.08
TRM3YDL112W RAD18P10862 487 aa2.05□□□□□ -2.08
TRM3YDL112W POA1P38218 177 aa2.05□□□□□ -2.08
TRM3YDL112W ACA1P39970 489 aa2.05□□□□□ -2.08
TRM3YDL112W VPS27P40343 622 aaKnown RBP2.05□□□□□ -2.08
TRM3YDL112W GCV1P48015 400 aa2.05□□□□□ -2.08
TRM3YDL112W SIW14P53965 281 aa2.05□□□□□ -2.08
TRM3YDL112W YDL144CQ07589 356 aa2.05□□□□□ -2.08
TRM3YDL112W MET7Q08645 548 aa2.05□□□□□ -2.08
TRM3YDL112W YIG1Q08956 461 aa2.05□□□□□ -2.08
TRM3YDL112W YPL066WQ12194 479 aa2.05□□□□□ -2.08
TRM3YDL112W TRP3P00937 484 aa2.04□□□□□ -2.08
TRM3YDL112W AMN1P38285 549 aaPredicted RBP2.04□□□□□ -2.08
TRM3YDL112W YBR238CP38330 731 aaKnown RBP2.04□□□□□ -2.08
TRM3YDL112W OSH3P38713 996 aaKnown RBP2.04□□□□□ -2.08
TRM3YDL112W ERP6P53198 216 aa2.04□□□□□ -2.08
TRM3YDL112W FKS1P38631 1876 aaKnown RBP2.04□□□□□ -2.08
TRM3YDL112W POL3P15436 1097 aa2.04□□□□□ -2.08
TRM3YDL112W SEC18P18759 758 aaKnown RBP2.04□□□□□ -2.08
TRM3YDL112W PRE10P21242 288 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
TRM3YDL112W CAD1P24813 409 aaKnown RBP2.04□□□□□ -2.08
TRM3YDL112W RAD24P32641 659 aa2.04□□□□□ -2.08
TRM3YDL112W SMY2P32909 740 aaKnown RBP2.04□□□□□ -2.08
TRM3YDL112W CST26P38226 397 aa2.04□□□□□ -2.08
TRM3YDL112W MNN1P39106 762 aa2.04□□□□□ -2.08
TRM3YDL112W FUN12P39730 1002 aaKnown RBP2.04□□□□□ -2.08
TRM3YDL112W RSP5P39940 809 aaKnown RBP2.04□□□□□ -2.08
TRM3YDL112W DOT6P40059 670 aaKnown RBP2.04□□□□□ -2.08
TRM3YDL112W CDC45Q08032 650 aa2.04□□□□□ -2.08
TRM3YDL112W DBP5P20449 482 aaKnown RBP2.04□□□□□ -2.08
TRM3YDL112W DOM34P33309 386 aa2.04□□□□□ -2.08
TRM3YDL112W LEM3P42838 414 aa2.04□□□□□ -2.08
TRM3YDL112W TNA1P53322 534 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 99.2 ms