RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeast

Gene VMA9, Length 222 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA9	YCL005W-A	NCS6	P53088	359 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	AIM14	P53109	570 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	PRP43	P53131	767 aa	Known RBP	2.71	□□□□□ -1.98
VMA9	YCL005W-A	DAM1	P53267	343 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	NOG2	P53742	486 aa	Known RBP	2.71	□□□□□ -1.98
VMA9	YCL005W-A	DUS1	P53759	423 aa	Known RBP	2.71	□□□□□ -1.98
VMA9	YCL005W-A	UGO1	Q03327	502 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	CRR1	Q05790	422 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	RXT3	Q07458	294 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	NPC2	Q12408	173 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	LAS17	Q12446	633 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	YBR182C-A	Q8TGU6	64 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	Q0142	Q9ZZW4	58 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	CHD1	P32657	1468 aa		2.71	□□□□□ -1.98
VMA9	YCL005W-A	IKI3	Q06706	1349 aa	Known RBP	2.7	□□□□□ -1.98
VMA9	YCL005W-A	PRC1	P00729	532 aa		2.7	□□□□□ -1.98
VMA9	YCL005W-A	HMG1	P12683	1054 aa		2.7	□□□□□ -1.98
VMA9	YCL005W-A	SEC21	P32074	935 aa	Known RBP	2.7	□□□□□ -1.98
VMA9	YCL005W-A	IME2	P32581	645 aa		2.7	□□□□□ -1.98
VMA9	YCL005W-A	PRS1	P32895	427 aa	Known RBP	2.7	□□□□□ -1.98
VMA9	YCL005W-A	NIT1	P40447	199 aa		2.7	□□□□□ -1.98
VMA9	YCL005W-A	URM1	P40554	99 aa	Predicted RBP	2.7	□□□□□ -1.98
VMA9	YCL005W-A	CHA4	P43634	648 aa		2.7	□□□□□ -1.98
VMA9	YCL005W-A	TAF1	P46677	1066 aa		2.7	□□□□□ -1.98
VMA9	YCL005W-A	SMC3	P47037	1230 aa		2.7	□□□□□ -1.98
VMA9	YCL005W-A	PSP2	P50109	593 aa	Known RBP	2.7	□□□□□ -1.98
VMA9	YCL005W-A	UBC9	P50623	157 aa	Predicted RBP	2.7	□□□□□ -1.98
VMA9	YCL005W-A	MET13	P53128	600 aa		2.7	□□□□□ -1.98
VMA9	YCL005W-A	PUS2	P53167	370 aa		2.7	□□□□□ -1.98
VMA9	YCL005W-A	CWC22	P53333	577 aa	Known RBP	2.7	□□□□□ -1.98
VMA9	YCL005W-A	YNL193W	P53870	558 aa		2.7	□□□□□ -1.98
VMA9	YCL005W-A	DIF1	O13577	133 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	TUB3	P09734	445 aa	Known RBP	2.69	□□□□□ -1.98
VMA9	YCL005W-A	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
VMA9	YCL005W-A	GSY1	P23337	708 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	SED4	P25365	1065 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	PCL2	P25693	308 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	STO1	P34160	861 aa	Known RBP	2.69	□□□□□ -1.98
VMA9	YCL005W-A	SAP190	P36123	1033 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	YKR051W	P36142	418 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	FLR1	P38124	548 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	YHR078W	P38799	552 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	CTF8	P38877	133 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	SDP1	P40479	209 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	RLP7	P40693	322 aa	Known RBP	2.69	□□□□□ -1.98
VMA9	YCL005W-A	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
VMA9	YCL005W-A	PBP1	P53297	722 aa	Known RBP	2.69	□□□□□ -1.98
VMA9	YCL005W-A	REH1	Q06709	432 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	THI21	Q08975	551 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	GPR1	Q12361	961 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	YLR149C	Q99296	730 aa		2.69	□□□□□ -1.98
VMA9	YCL005W-A	SFL1	P20134	766 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
VMA9	YCL005W-A	KAR4	P25583	335 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	SPC110	P32380	944 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	HOG1	P32485	435 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	RPS0A	P32905	252 aa	Known RBP	2.68	□□□□□ -1.98
VMA9	YCL005W-A	SET5	P38890	526 aa	Known RBP	2.68	□□□□□ -1.98
VMA9	YCL005W-A	SAK1	P38990	1142 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	SHR5	P41912	237 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	CAF16	P43569	289 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	SSY5	P47002	699 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	MRPS35	P53292	345 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	DOS2	P54858	310 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	SNP1	Q00916	300 aa	Predicted RBP	2.68	□□□□□ -1.98
VMA9	YCL005W-A	VPS30	Q02948	557 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	COG8	Q04632	607 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	ATG33	Q06485	197 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	NOP12	Q08208	459 aa	Known RBP	2.68	□□□□□ -1.98
VMA9	YCL005W-A	TRM13	Q12383	476 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	YGR161W-C	Q3E744	92 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	MMS22	Q06164	1454 aa		2.68	□□□□□ -1.98
VMA9	YCL005W-A	CTS1	P29029	562 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	LTV1	P34078	463 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	VPS24	P36095	224 aa	Known RBP	2.67	□□□□□ -1.98
VMA9	YCL005W-A	PCM1	P38628	557 aa	Known RBP	2.67	□□□□□ -1.98
VMA9	YCL005W-A	TCD1	P38756	429 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	CRP1	P38845	465 aa	Known RBP	2.67	□□□□□ -1.98
VMA9	YCL005W-A	VHR1	P40522	640 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	PFA3	P42836	336 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	PHO23	P50947	330 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	EXG2	P52911	562 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	ZIP2	P53061	704 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	TAN1	P53072	289 aa	Predicted RBP	2.67	□□□□□ -1.98
VMA9	YCL005W-A	MCM6	P53091	1017 aa	Known RBP	2.67	□□□□□ -1.98
VMA9	YCL005W-A	GPG1	P53130	126 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	NNF2	P53253	936 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	YNR029C	P53729	429 aa	Known RBP	2.67	□□□□□ -1.98
VMA9	YCL005W-A	ARP4	P80428	489 aa		2.67	□□□□□ -1.98
VMA9	YCL005W-A	LEE1	Q02799	301 aa	Known RBP	2.67	□□□□□ -1.98
VMA9	YCL005W-A	CLU1	Q03690	1277 aa	Known RBP	2.67	□□□□□ -1.98
VMA9	YCL005W-A	MUS81	Q04149	632 aa	Predicted RBP	2.67	□□□□□ -1.98
VMA9	YCL005W-A	CAD1	P24813	409 aa	Known RBP	2.66	□□□□□ -1.98
VMA9	YCL005W-A	SFP1	P32432	683 aa		2.66	□□□□□ -1.98
VMA9	YCL005W-A	UBP5	P39944	805 aa		2.66	□□□□□ -1.98
VMA9	YCL005W-A	TPM2	P40414	161 aa		2.66	□□□□□ -1.98
VMA9	YCL005W-A	HLJ1	P48353	224 aa		2.66	□□□□□ -1.98
VMA9	YCL005W-A	BUL1	P48524	976 aa		2.66	□□□□□ -1.98
VMA9	YCL005W-A	PIL1	P53252	339 aa	Known RBP	2.66	□□□□□ -1.98
VMA9	YCL005W-A	SDA1	P53313	767 aa	Known RBP	2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms