RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 HDGFL1Q5TGJ6 251 aa13.73□□□□□ -0.21
DDB1-224ENST00000545894 KLHL34Q8N239 644 aa13.73□□□□□ -0.21
DDB1-224ENST00000545894 RUFY3Q7L099 469 aa13.73□□□□□ -0.21
DDB1-224ENST00000545894 PIBF1Q8WXW3 757 aa13.73□□□□□ -0.21
DDB1-224ENST00000545894 FMNL2Q96PY5 1086 aa13.73□□□□□ -0.21
DDB1-224ENST00000545894 SMC3Q9UQE7 1217 aa13.73□□□□□ -0.21
DDB1-224ENST00000545894 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
DDB1-224ENST00000545894 PRAMEF22A3QJZ6 481 aa13.72□□□□□ -0.21
DDB1-224ENST00000545894 SRGAP3O43295 1099 aa13.72□□□□□ -0.21
DDB1-224ENST00000545894 ADCY5O95622 1261 aa13.72□□□□□ -0.21
DDB1-224ENST00000545894 F13A1P00488 732 aa13.72□□□□□ -0.21
DDB1-224ENST00000545894 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
DDB1-224ENST00000545894 PHAXQ9H814 394 aaKnown RBP13.72□□□□□ -0.21
DDB1-224ENST00000545894 HEG1Q9ULI3 1381 aa13.72□□□□□ -0.21
DDB1-224ENST00000545894 LOC102724428A0A0B4J2F2 783 aa13.71□□□□□ -0.21
DDB1-224ENST00000545894 HCLS1P14317 486 aaPredicted RBP13.71□□□□□ -0.21
DDB1-224ENST00000545894 SIK1P57059 783 aa13.71□□□□□ -0.21
DDB1-224ENST00000545894 DNTTIP2Q5QJE6 756 aaKnown RBP13.71□□□□□ -0.21
DDB1-224ENST00000545894 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
DDB1-224ENST00000545894 PLSCR1O15162 318 aa13.71□□□□□ -0.21
DDB1-224ENST00000545894 KCNQ4P56696 695 aa13.71□□□□□ -0.21
DDB1-224ENST00000545894 HSP90AB4PQ58FF6 505 aa13.71□□□□□ -0.21
DDB1-224ENST00000545894 MYRIPQ8NFW9 859 aa13.71□□□□□ -0.21
DDB1-224ENST00000545894 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.216e-17■■■■□ 20.4
DDB1-224ENST00000545894 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.22
DDB1-224ENST00000545894 FIBPO43427 364 aa13.7□□□□□ -0.22
DDB1-224ENST00000545894 GIGYF1O75420 1035 aaPredicted RBP13.7□□□□□ -0.22
DDB1-224ENST00000545894 NOLC1Q14978 699 aaKnown RBP eCLIP13.7□□□□□ -0.226e-10■■■■□ 21.4
DDB1-224ENST00000545894 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
DDB1-224ENST00000545894 PROM2Q8N271 834 aa13.7□□□□□ -0.22
DDB1-224ENST00000545894 PRIMPOLQ96LW4 560 aa13.7□□□□□ -0.22
DDB1-224ENST00000545894 USP42Q9H9J4 1324 aaKnown RBP13.7□□□□□ -0.22
DDB1-224ENST00000545894 ZNF830Q96NB3 372 aaPredicted RBP13.7□□□□□ -0.22
DDB1-224ENST00000545894 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
DDB1-224ENST00000545894 UBR2Q8IWV8 1755 aa13.7□□□□□ -0.22
DDB1-224ENST00000545894 TTC41PQ6P2S7 1318 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 KDM4AO75164 1064 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 CASTP20810 708 aaKnown RBP13.69□□□□□ -0.22
DDB1-224ENST00000545894 ATP6V1AP38606 617 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 EN1Q05925 392 aaPredicted RBP13.69□□□□□ -0.22
DDB1-224ENST00000545894 SF3B2Q13435 895 aaKnown RBP13.69□□□□□ -0.22
DDB1-224ENST00000545894 ITPK1Q13572 414 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 CCDC125Q86Z20 511 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 MPNDQ8N594 471 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 RUFY2Q8WXA3 655 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 GLRX3O76003 335 aaKnown RBP13.69□□□□□ -0.22
DDB1-224ENST00000545894 SNRPA1P09661 255 aaKnown RBP13.69□□□□□ -0.22
DDB1-224ENST00000545894 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
DDB1-224ENST00000545894 HMGN5P82970 282 aaKnown RBP13.69□□□□□ -0.22
DDB1-224ENST00000545894 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 DEFB132Q7Z7B7 95 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 DNAJC10Q8IXB1 793 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 CAMKK2Q96RR4 588 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 FUCA2Q9BTY2 467 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 DIAPH3Q9NSV4 1193 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 LRRC4BQ9NT99 713 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 USP16Q9Y5T5 823 aa13.69□□□□□ -0.22
DDB1-224ENST00000545894 VPS53Q5VIR6 699 aa13.68□□□□□ -0.22
DDB1-224ENST00000545894 ZSCAN31Q96LW9 406 aaPredicted RBP13.68□□□□□ -0.22
DDB1-224ENST00000545894 TTC12Q9H892 705 aaPredicted RBP13.68□□□□□ -0.22
DDB1-224ENST00000545894 CCNL1Q9UK58 526 aaPredicted RBP13.68□□□□□ -0.22
DDB1-224ENST00000545894 LARGE1O95461 756 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 GJB2P29033 226 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 EZH2Q15910 746 aaKnown RBP13.67□□□□□ -0.22
DDB1-224ENST00000545894 TXNRD1Q16881 649 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 BEND3Q5T5X7 828 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 CCDC83Q8IWF9 413 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 DNAAF4Q8WXU2 420 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 SH2B1Q9NRF2 756 aaPredicted RBP13.67□□□□□ -0.22
DDB1-224ENST00000545894 PDRG1Q9NUG6 133 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 MTMR6Q9Y217 621 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 TCHHQ07283 1943 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 CPA1P15085 419 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 BAG6P46379 1132 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 CHMP4AQ9BY43 222 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 TM6SF1Q9BZW5 370 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 SPTLC3Q9NUV7 552 aa13.67□□□□□ -0.22
DDB1-224ENST00000545894 HOXB7P09629 217 aa13.66□□□□□ -0.22
DDB1-224ENST00000545894 EIF2S2P20042 333 aaKnown RBP13.66□□□□□ -0.22
DDB1-224ENST00000545894 DNM1Q05193 864 aaKnown RBP13.66□□□□□ -0.22
DDB1-224ENST00000545894 OS9Q13438 667 aaPredicted RBP13.66□□□□□ -0.22
DDB1-224ENST00000545894 GIMAP6Q6P9H5 292 aa13.66□□□□□ -0.22
DDB1-224ENST00000545894 JAKMIP1Q96N16 626 aaKnown RBP13.66□□□□□ -0.22
DDB1-224ENST00000545894 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
DDB1-224ENST00000545894 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
DDB1-224ENST00000545894 CLASRPQ8N2M8 674 aaKnown RBP13.66□□□□□ -0.22
DDB1-224ENST00000545894 LINC00116Q8NCU8 138 aa13.66□□□□□ -0.22
DDB1-224ENST00000545894 KCNB2Q92953 911 aa13.66□□□□□ -0.22
DDB1-224ENST00000545894 CYP46A1Q9Y6A2 500 aa13.66□□□□□ -0.22
DDB1-224ENST00000545894 LY75O60449 1722 aa13.66□□□□□ -0.22
DDB1-224ENST00000545894 PI4KAP2A4QPH2 592 aa13.65□□□□□ -0.22
DDB1-224ENST00000545894 CYP19A1P11511 503 aaPredicted RBP13.65□□□□□ -0.22
DDB1-224ENST00000545894 GTF2F1P35269 517 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDB1-224ENST00000545894 PTH1RQ03431 593 aa13.65□□□□□ -0.22
DDB1-224ENST00000545894 PI4KAP1Q8N8J0 262 aa13.65□□□□□ -0.22
DDB1-224ENST00000545894 TEX13AQ9BXU3 409 aaPredicted RBP13.65□□□□□ -0.22
DDB1-224ENST00000545894 CHPF2Q9P2E5 772 aa13.65□□□□□ -0.22
DDB1-224ENST00000545894 TPM3P06753 285 aa13.65□□□□□ -0.22
DDB1-224ENST00000545894 ADCK5Q3MIX3 580 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms