RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 MecomP14404 1042 aa13.08□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Nlrp1aQ2LKU9 1182 aa13.08□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Ppp4r3aQ6P2K6 820 aa13.08□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Kdm4aQ8BW72 1064 aa13.08□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Rcan3Q9JKK0 239 aa13.08□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Cdhr2E9Q7P9 1308 aa13.08□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Kif4P33174 1231 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Neurod6P48986 337 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 RubcnlQ3TD16 648 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Skida1Q80YR3 822 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Atf7Q8R0S1 413 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Stx6Q9JKK1 255 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Psma5Q9Z2U1 241 aaKnown RBP13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Ugt1a5B2RT14 529 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 AK157302I3ITR1 129 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Rnf20Q5DTM8 973 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Dhx38Q80X98 1228 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Isca1Q9D924 129 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 PhaxQ9JJT9 385 aaKnown RBP13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 AtrnQ9WU60 1428 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Col4a1P02463 1669 aa13.07□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Prl3d3A0A0M6L0J6 224 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Rbbp8nlA2ABX0 614 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Pkp1P97350 728 aaKnown RBP13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Wdr93Q402B2 695 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Sp8Q8BMJ8 486 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Gripap1Q8VD04 806 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Ehd4Q9EQP2 541 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Mrc1Q61830 1456 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Syce3B5KM66 88 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Sult6b1P0CC03 303 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Lrrc43Q3V0L5 667 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Bms1Q6PGF5 1284 aaKnown RBP13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Polr3dQ91WD1 398 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 StrbpQ91WM1 672 aaKnown RBP13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Cwc25Q9DBF7 416 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Stard3nlQ9DCI3 235 aa13.06□□□□□ -0.32
Ldb3-202ENSMUST00000022328 AppP12023 770 aa13.05□□□□□ -0.32
Ldb3-202ENSMUST00000022328 F2rP30558 430 aa13.05□□□□□ -0.32
Ldb3-202ENSMUST00000022328 AbraQ8BUZ1 375 aa13.05□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Hmg20bQ9Z104 317 aa13.05□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Ank1Q02357 1862 aa13.05□□□□□ -0.32
Ldb3-202ENSMUST00000022328 NfkbibQ60778 359 aa13.05□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Mrpl50Q8VDT9 159 aaKnown RBP13.05□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Bmp2kQ91Z96 1138 aa13.05□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Cers3Q1A3B0 383 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Atg9aQ68FE2 551 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Nek11Q8C0Q4 628 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Tmc2Q8R4P4 888 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 LratQ9JI60 231 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Ltb4r2Q9JJL9 360 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Prl3d2F6R3P9 224 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Eef2kO08796 724 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Anp32cQ64G17 123 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Nol12Q8BG17 217 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Mylk2Q8VCR8 613 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Pard3Q99NH2 1333 aa13.04□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Myd88P22366 296 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 MsnP26041 577 aaKnown RBP13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Rbm27Q5SFM8 1060 aaKnown RBP13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Vps54Q5SPW0 977 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Fam102bQ8BQS4 339 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Rps6kb1Q8BSK8 525 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Fam13bQ8K2H3 851 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Grpel1Q99LP6 217 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Fbxl16A2RT62 479 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 MycnP03966 462 aaKnown RBP13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Tbc1d31Q6NXY1 996 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 E4f1Q8CCE9 783 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Smc4Q8CG47 1286 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Acsbg1Q99PU5 721 aa13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Noa1Q9JJG9 693 aaKnown RBP13.03□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Kif3aP28741 701 aa13.02□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Gm12185Q5NCB2 835 aa13.02□□□□□ -0.32
Ldb3-202ENSMUST00000022328 DpydQ8CHR6 1025 aa13.02□□□□□ -0.32
Ldb3-202ENSMUST00000022328 Rnf216P58283 853 aa13.02□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Fam213aQ9CYH2 218 aa13.02□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Sos2Q02384 1333 aa13.02□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Crb1Q8VHS2 1405 aa13.02□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Tubb6Q922F4 447 aa13.01□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Aox1O54754 1333 aa13.01□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Eya2O08575 532 aa13.01□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ube2hP62257 183 aa13.01□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Fam117bQ3U3E2 584 aa13.01□□□□□ -0.33
Ldb3-202ENSMUST00000022328 ZyxQ62523 564 aa13.01□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Rnf214Q8BFU3 668 aaKnown RBP13.01□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Inpp5bQ8K337 993 aa13.01□□□□□ -0.33
Ldb3-202ENSMUST00000022328 NaspQ99MD9 773 aaKnown RBP13.01□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Rrs1Q9CYH6 365 aaKnown RBP13.01□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Brwd3A2AHJ4 1799 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Shank3Q4ACU6 1730 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 PappaQ8R4K8 1624 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Gm45140A0A0N4SUM8 220 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 FanccP50652 591 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Usp48Q3V0C5 1052 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ddx46Q569Z5 1032 aaKnown RBP13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Tceanc2Q8R2M0 207 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Ciao1Q99KN2 339 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Abca3Q8R420 1704 aa13□□□□□ -0.33
Ldb3-202ENSMUST00000022328 Repin1Q5U4E2 545 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms