RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Rab3gap1Q80UJ7 981 aa18.86■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Ppp6r3Q922D4 844 aa18.86■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Kif2cQ922S8 721 aa18.86■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Gja10Q9WUS4 505 aa18.86■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Jdp2P97875 163 aa18.85■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Rbm26Q6NZN0 1012 aaKnown RBP18.85■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Snrpa1P57784 255 aaKnown RBP18.85■□□□□ 0.61
Ddx49-201ENSMUST00000008004 EappQ5BU09 281 aa18.85■□□□□ 0.61
Ddx49-201ENSMUST00000008004 1810065E05RikQ5NC41 235 aa18.85■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Popdc2Q9ES82 367 aa18.85■□□□□ 0.61
Ddx49-201ENSMUST00000008004 EspnlQ3UYR4 1005 aa18.84■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Brf1Q8CFK2 676 aa18.84■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Stk3Q9JI10 497 aa18.84■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Anapc15-psA0A140T8L6 141 aa18.83■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Atp8a2P98200 1148 aa18.83■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Nucb1Q02819 459 aaKnown RBP18.83■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Erc2Q6PH08 957 aa18.83■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Fam84aQ9D650 292 aa18.83■□□□□ 0.61
Ddx49-201ENSMUST00000008004 Slc39a11Q8BWY7 342 aa18.83■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Sf3b3Q921M3 1217 aaKnown RBP18.83■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Sh3bp5Q9Z131 463 aa18.83■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Golgb1E9PVZ8 3238 aa18.82■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Gsdma2Q32M21 443 aa18.82■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Nphp3Q7TNH6 1325 aa18.82■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Tbc1d4Q8BYJ6 1307 aa18.82■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Eva1cP58659 440 aa18.82■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Il1rapl2Q9ERS6 686 aa18.82■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Lgr5Q9Z1P4 907 aa18.82■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Brpf1B2RRD7 1212 aa18.81■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Plekhf1Q3TB82 279 aa18.81■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Cfap44E9Q5M6 1843 aa18.81■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Kif23E9Q5G3 953 aa18.8■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Slc4a1P04919 929 aa18.8■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Vps54Q5SPW0 977 aa18.8■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Noc3lQ8VI84 807 aaKnown RBP18.8■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Plekho1Q9JIY0 408 aa18.8■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Asap2Q7SIG6 958 aa18.8■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Tmc1Q8R4P5 757 aa18.8■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Znfx1Q8R151 1909 aaKnown RBP18.8■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Togaram1Q6A070 1776 aaKnown RBP18.8■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Ccne2Q9Z238 404 aa18.79■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Pde8bE9Q4S1 865 aa18.79■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Plbd2Q3TCN2 594 aa18.79■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Znf496Q5SXI5 585 aa18.79■□□□□ 0.6
Ddx49-201ENSMUST00000008004 GorabQ8BRM2 368 aa18.79■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Sned1Q70E20 1403 aa18.78■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Kdm3aQ6PCM1 1323 aa18.78■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Aknad1E9Q8N6 675 aa18.78■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Chrna2Q91X60 512 aa18.78■□□□□ 0.6
Ddx49-201ENSMUST00000008004 1700029H14RikE9PY36 240 aa18.77■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Atp2b3Q0VF55 1220 aa18.77■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Ube4aE9Q735 1028 aa18.77■□□□□ 0.6
Ddx49-201ENSMUST00000008004 Nol8Q3UHX0 1147 aaKnown RBP18.77■□□□□ 0.6
Ddx49-201ENSMUST00000008004 CpvlQ9D3S9 478 aa18.77■□□□□ 0.6
Ddx49-201ENSMUST00000008004 TsksO54887 585 aa18.76■□□□□ 0.59
Ddx49-201ENSMUST00000008004 ZyxQ62523 564 aa18.76■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Atxn2lQ7TQH0 1049 aaKnown RBP18.76■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Tmem143Q8VD26 458 aa18.76■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Hsp90b1P08113 802 aaKnown RBP18.76■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Ezh2Q61188 746 aaKnown RBP18.76■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Tmem266Q8BZB3 538 aa18.76■□□□□ 0.59
Ddx49-201ENSMUST00000008004 EvplQ9D952 2035 aa18.75■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Rbbp8nlA2ABX0 614 aa18.75■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Gm7347D3YYI9 267 aa18.75■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Speer4aF8VPX6 267 aa18.75■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Prom2Q3UUY6 835 aa18.75■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Ppip5k2Q6ZQB6 1129 aa18.75■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Sptlc3Q8BG54 563 aa18.75■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Col23a1Q8K4G2 532 aa18.75■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Rbm5Q91YE7 815 aaKnown RBP18.74■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Col4a5Q63ZW6 1691 aa18.74■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Sept1P42209 366 aa18.74■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Sde2Q8K1J5 448 aaKnown RBP18.74■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Plcd4Q8K3R3 807 aa18.74■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Krt25Q8VCW2 446 aa18.74■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Tfip11Q9ERA6 838 aaKnown RBP18.74■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Kcnq5Q9JK45 933 aa18.74■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Scn11aQ9R053 1765 aa18.74■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Col3a1P08121 1464 aa18.73■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Rps8P62242 208 aaKnown RBP18.73■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Ddx46Q569Z5 1032 aaKnown RBP18.73■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Mctp2Q5RJH2 878 aa18.73■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Fbxo3Q9DC63 480 aa18.73■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Ift57Q8BXG3 429 aa18.73■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Rhot2Q8JZN7 620 aa18.73■□□□□ 0.59
Ddx49-201ENSMUST00000008004 McamQ8R2Y2 648 aaKnown RBP18.73■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Adarb2Q9JI20 745 aa18.73■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Nup98Q6PFD9 1816 aaKnown RBP18.72■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Ccdc85cE9Q6B2 420 aa18.72■□□□□ 0.59
Ddx49-201ENSMUST00000008004 GabrdP22933 449 aa18.72■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Ltv1Q6NSQ7 470 aaKnown RBP18.72■□□□□ 0.59
Ddx49-201ENSMUST00000008004 HlfQ8BW74 295 aa18.72■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Strip1Q8C079 837 aa18.72■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Map3k15A2AQW0 1331 aa18.72■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Celf1P28659 486 aaKnown RBP18.71■□□□□ 0.59
Ddx49-201ENSMUST00000008004 IntuQ059U7 942 aa18.71■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Golim4Q8BXA1 655 aa18.71■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Naa16Q9DBB4 864 aa18.71■□□□□ 0.59
Ddx49-201ENSMUST00000008004 Sh3tc1G3X9F6 1346 aa18.71■□□□□ 0.59
Ddx49-201ENSMUST00000008004 StrcQ8VIM6 1809 aa18.71■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms