RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 RAI1P53063 387 aaKnown RBP2.17□□□□□ -2.06
snR48snR48 ERP5P38819 212 aa2.16□□□□□ -2.06
snR48snR48 SDP1P40479 209 aa2.16□□□□□ -2.06
snR48snR48 MAF1P41910 395 aa2.16□□□□□ -2.06
snR48snR48 TEL2P53038 688 aa2.16□□□□□ -2.06
snR48snR48 IRC13Q08630 104 aa2.16□□□□□ -2.06
snR48snR48 MCD1Q12158 566 aa2.16□□□□□ -2.06
snR48snR48 PRE9P23638 258 aaKnown RBP2.15□□□□□ -2.07
snR48snR48 FMP52P40008 231 aa2.15□□□□□ -2.07
snR48snR48 STP1Q00947 519 aa2.15□□□□□ -2.07
snR48snR48 RPP1P38786 293 aa2.14□□□□□ -2.07
snR48snR48 SFB2P53953 876 aa2.14□□□□□ -2.07
snR48snR48 SLK19Q08581 821 aaKnown RBP2.14□□□□□ -2.07
snR48snR48 SWM1Q12379 170 aa2.14□□□□□ -2.07
snR48snR48 NUP1P20676 1076 aa2.13□□□□□ -2.07
snR48snR48 APN1P22936 367 aa2.13□□□□□ -2.07
snR48snR48 RER2P35196 286 aa2.13□□□□□ -2.07
snR48snR48 BDH2P39713 417 aa2.13□□□□□ -2.07
snR48snR48 NDC80P40460 691 aa2.13□□□□□ -2.07
snR48snR48 MRL1Q06815 381 aa2.13□□□□□ -2.07
snR48snR48 YBL113CQ7M4S9 792 aa2.13□□□□□ -2.07
snR48snR48 UBS1P38290 277 aa2.12□□□□□ -2.07
snR48snR48 GGA2P38817 585 aaKnown RBP2.12□□□□□ -2.07
snR48snR48 CTF8P38877 133 aa2.12□□□□□ -2.07
snR48snR48 SCW10Q04951 389 aa2.12□□□□□ -2.07
snR48snR48 PHR1P05066 565 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
snR48snR48 MBR1P23493 339 aa2.11□□□□□ -2.07
snR48snR48 ULP2P40537 1034 aaPredicted RBP2.11□□□□□ -2.07
snR48snR48 YIR042CP40586 236 aa2.11□□□□□ -2.07
snR48snR48 MRPS18P42847 217 aa2.11□□□□□ -2.07
snR48snR48 HSV2P50079 448 aaPredicted RBP2.11□□□□□ -2.07
snR48snR48 SSL1Q04673 461 aaPredicted RBP2.11□□□□□ -2.07
snR48snR48 PRP4P20053 465 aaKnown RBP2.1□□□□□ -2.07
snR48snR48 YAP1802P53309 568 aa2.1□□□□□ -2.07
snR48snR48 YOR111WQ99210 232 aa2.1□□□□□ -2.07
snR48snR48 SDS24P38314 527 aa2.09□□□□□ -2.07
snR48snR48 GCR1P07261 785 aa2.08□□□□□ -2.08
snR48snR48 MET4P32389 672 aa2.08□□□□□ -2.08
snR48snR48 GLG1P36143 616 aa2.08□□□□□ -2.08
snR48snR48 BCD1P38772 366 aa2.08□□□□□ -2.08
snR48snR48 PSA1P41940 361 aaKnown RBP2.08□□□□□ -2.08
snR48snR48 EAF1Q06337 982 aa2.08□□□□□ -2.08
snR48snR48 MLH3Q12083 715 aa2.08□□□□□ -2.08
snR48snR48 HAT1Q12341 374 aa2.08□□□□□ -2.08
snR48snR48 LAT1P12695 482 aaKnown RBP2.07□□□□□ -2.08
snR48snR48 ECM32P32644 1121 aaKnown RBP2.07□□□□□ -2.08
snR48snR48 HIS7P33734 552 aaKnown RBP2.07□□□□□ -2.08
snR48snR48 GCS1P35197 352 aa2.07□□□□□ -2.08
snR48snR48 PXL1P36166 706 aa2.07□□□□□ -2.08
snR48snR48 MUP3P38734 546 aa2.07□□□□□ -2.08
snR48snR48 ENP2P48234 707 aaKnown RBP2.07□□□□□ -2.08
snR48snR48 GYP7P48365 746 aa2.07□□□□□ -2.08
snR48snR48 UBC9P50623 157 aaPredicted RBP2.07□□□□□ -2.08
snR48snR48 CDC3P32457 520 aaKnown RBP2.06□□□□□ -2.08
snR48snR48 STE13P33894 931 aa2.06□□□□□ -2.08
snR48snR48 YHL050CP38721 697 aa2.06□□□□□ -2.08
snR48snR48 YHR219WP38900 624 aa2.06□□□□□ -2.08
snR48snR48 ARG2P40360 574 aa2.06□□□□□ -2.08
snR48snR48 UBC11P52492 156 aa2.06□□□□□ -2.08
snR48snR48 YGR122WP53272 402 aa2.06□□□□□ -2.08
snR48snR48 ASM4Q05166 528 aa2.06□□□□□ -2.08
snR48snR48 YPL066WQ12194 479 aa2.06□□□□□ -2.08
snR48snR48 NOT3P06102 836 aaKnown RBP2.05□□□□□ -2.08
snR48snR48 SIR3P06701 978 aa2.05□□□□□ -2.08
snR48snR48 SAH1P39954 449 aaKnown RBP2.05□□□□□ -2.08
snR48snR48 HOS4P40480 1083 aa2.05□□□□□ -2.08
snR48snR48 THI12P42883 340 aa2.05□□□□□ -2.08
snR48snR48 THI5P43534 340 aa2.05□□□□□ -2.08
snR48snR48 THI11P47183 340 aa2.05□□□□□ -2.08
snR48snR48 CTR1P49573 406 aa2.05□□□□□ -2.08
snR48snR48 THI13Q07748 340 aa2.05□□□□□ -2.08
snR48snR48 MPH2P0CD99 609 aa2.04□□□□□ -2.08
snR48snR48 HIR1P32479 840 aa2.04□□□□□ -2.08
snR48snR48 RPT1P33299 467 aaKnown RBP2.04□□□□□ -2.08
snR48snR48 YBR238CP38330 731 aaKnown RBP2.04□□□□□ -2.08
snR48snR48 YKE2P52553 114 aa2.04□□□□□ -2.08
snR48snR48 NMA2P53204 395 aa2.04□□□□□ -2.08
snR48snR48 ASI2P53895 289 aa2.04□□□□□ -2.08
snR48snR48 NDD1Q08887 554 aa2.04□□□□□ -2.08
snR48snR48 CDC12P32468 407 aaKnown RBP2.03□□□□□ -2.08
snR48snR48 YKR078WP36158 585 aaKnown RBP2.03□□□□□ -2.08
snR48snR48 CCT5P40413 562 aaKnown RBP2.03□□□□□ -2.08
snR48snR48 ZAP1P47043 880 aa2.03□□□□□ -2.08
snR48snR48 RKM4Q12504 494 aa2.03□□□□□ -2.08
snR48snR48 RAD2P07276 1031 aa2.02□□□□□ -2.09
snR48snR48 SSA1P10591 642 aaKnown RBP2.02□□□□□ -2.09
snR48snR48 LSC1P53598 329 aaKnown RBP2.02□□□□□ -2.09
snR48snR48 YPR196WQ06595 470 aa2.02□□□□□ -2.09
snR48snR48 SPC29P33419 253 aa2.01□□□□□ -2.09
snR48snR48 YIL108WP40483 696 aaKnown RBP2.01□□□□□ -2.09
snR48snR48 VHR1P40522 640 aa2.01□□□□□ -2.09
snR48snR48 YTH1Q06102 208 aaPredicted RBP2.01□□□□□ -2.09
snR48snR48 PYC1P11154 1178 aaKnown RBP2□□□□□ -2.09
snR48snR48 PEX6P33760 1030 aa2□□□□□ -2.09
snR48snR48 YOX1P34161 385 aa2□□□□□ -2.09
snR48snR48 TSL1P38427 1098 aaKnown RBP2□□□□□ -2.09
snR48snR48 YHR078WP38799 552 aa2□□□□□ -2.09
snR48snR48 FMP30Q02883 468 aa2□□□□□ -2.09
snR48snR48 ATG11Q12527 1178 aa2□□□□□ -2.09
snR48snR48 RAD27P26793 382 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms