RNA–Protein interactions for RNA: YPL180W

TCO89, Transcript of Subunit of TORC1 (Tor1p or Tor2p-Kog1p-Lst8p-Tco89p), yeast

Gene TCO89, Length 2,400 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCO89	YPL180W	YPL225W	Q08971	146 aa	Known RBP	4.25	□□□□□ -1.73
TCO89	YPL180W	PIN2	Q12057	282 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	TRM3	Q07527	1436 aa		4.25	□□□□□ -1.73
TCO89	YPL180W	PUT4	P15380	627 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	LCB1	P25045	558 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	RPC53	P25441	422 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	MRP4	P32902	394 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	ALG3	P38179	458 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	CCZ1	P38273	704 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	RTC3	P38804	111 aa	Predicted RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	LOC1	P43586	204 aa	Predicted RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	JJJ2	P46997	583 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	MDV1	P47025	714 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	ERV25	P54837	211 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	TRS130	Q03660	1102 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	SMF3	Q12078	473 aa	Predicted RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	YOR131C	Q12486	218 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	YLR419W	Q06698	1435 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	CIT1	P00890	479 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	IDI1	P15496	288 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	OM45	P16547	393 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	SPO16	P17122	198 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	MRPL8	P22353	238 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	SSE1	P32589	693 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	MRS6	P32864	603 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	MSG5	P38590	489 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	NOP16	P40007	231 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	TGL3	P40308	642 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	AGE2	P40529	298 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	GPP1	P41277	250 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	AIP1	P46680	615 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	FYV8	P46949	817 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	ALT1	P52893	592 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	PSD2	P53037	1138 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	YGL242C	P53066	181 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	MON1	P53129	644 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	SPC105	P53148	917 aa		4.24	□□□□□ -1.73
TCO89	YPL180W	YNR029C	P53729	429 aa	Known RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	DIB1	Q06819	143 aa	Predicted RBP	4.24	□□□□□ -1.73
TCO89	YPL180W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
TCO89	YPL180W	ADH4	P10127	382 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	SFL1	P20134	766 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	PUP1	P25043	261 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	LYP1	P32487	611 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	YKL063C	P35725	167 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	RRM3	P38766	723 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	SMF2	P38778	549 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
TCO89	YPL180W	NUP82	P40368	713 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	CNN1	P43618	361 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	TOM22	P49334	152 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	ASI1	P54074	624 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	OPY2	Q06810	360 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	TLG2	Q08144	397 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	SDH5	Q08230	162 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	ABP140	Q08641	628 aa	Known RBP	4.23	□□□□□ -1.73
TCO89	YPL180W	RPO31	P04051	1460 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	MMS22	Q06164	1454 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	SUI3	P09064	285 aa	Known RBP	4.23	□□□□□ -1.73
TCO89	YPL180W	ISY1	P21374	235 aa	Predicted RBP	4.23	□□□□□ -1.73
TCO89	YPL180W	RDS1	P25611	832 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	DOA4	P32571	926 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	PEP7	P32609	515 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	SCT1	P32784	759 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	UBP11	P36026	717 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	ERP5	P38819	212 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	XKS1	P42826	600 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	GCN20	P43535	752 aa	Known RBP	4.23	□□□□□ -1.73
TCO89	YPL180W	ALB1	P47019	175 aa	Predicted RBP	4.23	□□□□□ -1.73
TCO89	YPL180W	ABM1	P47146	123 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	FYV6	P53913	173 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	TGL2	P54857	326 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	EIS1	Q05050	843 aa	Known RBP	4.23	□□□□□ -1.73
TCO89	YPL180W	MMR1	Q06324	491 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	GYP1	Q08484	637 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	RRP6	Q12149	733 aa	Known RBP	4.23	□□□□□ -1.73
TCO89	YPL180W	AHC1	Q12433	566 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	TMA17	Q12513	150 aa		4.23	□□□□□ -1.73
TCO89	YPL180W	PRP5	P21372	849 aa	Predicted RBP	4.22	□□□□□ -1.73
TCO89	YPL180W	SPB1	P25582	841 aa	Predicted RBP	4.22	□□□□□ -1.73
TCO89	YPL180W	RPN2	P32565	945 aa	Known RBP	4.22	□□□□□ -1.73
TCO89	YPL180W	HSP78	P33416	811 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	MIF2	P35201	549 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	YPT52	P36018	234 aa	Known RBP	4.22	□□□□□ -1.73
TCO89	YPL180W	DSS1	P39112	969 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	CEP3	P40969	608 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	ZIP2	P53061	704 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	YML131W	Q03102	365 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	TAF8	Q03750	510 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	PRP42	Q03776	544 aa	Known RBP	4.22	□□□□□ -1.73
TCO89	YPL180W	SPC2	Q04969	178 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	VPS36	Q06696	566 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	PPM2	Q08282	695 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	TYW1	Q08960	810 aa	Known RBP	4.22	□□□□□ -1.73
TCO89	YPL180W	MNL2	Q12205	849 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	FRT1	Q99332	602 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	SPS22	P25380	463 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	DMC1	P25453	334 aa		4.22	□□□□□ -1.73
TCO89	YPL180W	MGM101	P32787	269 aa	Known RBP	4.22	□□□□□ -1.73
TCO89	YPL180W	RPC34	P32910	317 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms