RNA–Protein interactions for RNA: YPL124W

SPC29, Transcript of Inner plaque spindle pole body (SPB) component, yeast

Gene SPC29, Length 762 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC29	YPL124W	RPD3	P32561	433 aa		4.67	□□□□□ -1.66
SPC29	YPL124W	CTF13	P35203	478 aa		4.67	□□□□□ -1.66
SPC29	YPL124W	JIP5	Q06214	492 aa	Predicted RBP	4.67	□□□□□ -1.66
SPC29	YPL124W	PEX19	Q07418	342 aa		4.67	□□□□□ -1.66
SPC29	YPL124W	ACF2	Q12168	779 aa		4.67	□□□□□ -1.66
SPC29	YPL124W	ERT1	P38140	529 aa		4.66	□□□□□ -1.66
SPC29	YPL124W	IRC10	Q08118	586 aa		4.66	□□□□□ -1.66
SPC29	YPL124W	TOK1	P40310	691 aa		4.65	□□□□□ -1.67
SPC29	YPL124W	YIL108W	P40483	696 aa	Known RBP	4.65	□□□□□ -1.67
SPC29	YPL124W	PFD1	P46988	109 aa		4.65	□□□□□ -1.67
SPC29	YPL124W	CCM1	P48237	864 aa	Predicted RBP	4.65	□□□□□ -1.67
SPC29	YPL124W	MUK1	Q02866	612 aa		4.65	□□□□□ -1.67
SPC29	YPL124W	VPS30	Q02948	557 aa		4.65	□□□□□ -1.67
SPC29	YPL124W	LCD1	Q04377	747 aa		4.65	□□□□□ -1.67
SPC29	YPL124W	TRM11	Q12463	433 aa		4.65	□□□□□ -1.67
SPC29	YPL124W	STU2	P46675	888 aa		4.64	□□□□□ -1.67
SPC29	YPL124W	YKR011C	Q02209	353 aa		4.64	□□□□□ -1.67
SPC29	YPL124W	YBR184W	P38299	523 aa		4.63	□□□□□ -1.67
SPC29	YPL124W	VAC8	P39968	578 aa		4.63	□□□□□ -1.67
SPC29	YPL124W	ALD6	P54115	500 aa	Known RBP	4.63	□□□□□ -1.67
SPC29	YPL124W	PRP4	P20053	465 aa	Known RBP	4.62	□□□□□ -1.67
SPC29	YPL124W	TYE7	P33122	291 aa	Predicted RBP	4.62	□□□□□ -1.67
SPC29	YPL124W	MTH1	P35198	433 aa		4.62	□□□□□ -1.67
SPC29	YPL124W	TPO2	P53283	614 aa		4.62	□□□□□ -1.67
SPC29	YPL124W	YMR206W	Q03695	313 aa		4.62	□□□□□ -1.67
SPC29	YPL124W	TDA5	Q06417	326 aa	Known RBP	4.62	□□□□□ -1.67
SPC29	YPL124W	FMP25	Q08023	583 aa		4.62	□□□□□ -1.67
SPC29	YPL124W	FRE5	Q08908	694 aa		4.62	□□□□□ -1.67
SPC29	YPL124W	PRP9	P19736	530 aa	Known RBP	4.61	□□□□□ -1.67
SPC29	YPL124W	RFA1	P22336	621 aa	Known RBP	4.61	□□□□□ -1.67
SPC29	YPL124W	REC104	P33323	182 aa		4.61	□□□□□ -1.67
SPC29	YPL124W	UTP8	P53276	713 aa	Known RBP	4.61	□□□□□ -1.67
SPC29	YPL124W	GND2	P53319	492 aa		4.61	□□□□□ -1.67
SPC29	YPL124W	TIM44	Q01852	431 aa		4.61	□□□□□ -1.67
SPC29	YPL124W	SWM1	Q12379	170 aa		4.61	□□□□□ -1.67
SPC29	YPL124W	URA1	P28272	314 aa	Predicted RBP	4.6	□□□□□ -1.67
SPC29	YPL124W	PPS1	P38148	807 aa		4.6	□□□□□ -1.67
SPC29	YPL124W	YHR078W	P38799	552 aa		4.6	□□□□□ -1.67
SPC29	YPL124W	ELO3	P40319	345 aa		4.6	□□□□□ -1.67
SPC29	YPL124W	CEP3	P40969	608 aa		4.6	□□□□□ -1.67
SPC29	YPL124W	MRPS35	P53292	345 aa		4.6	□□□□□ -1.67
SPC29	YPL124W	DLT1	Q04216	342 aa		4.6	□□□□□ -1.67
SPC29	YPL124W	ADY4	Q05955	493 aa		4.6	□□□□□ -1.67
SPC29	YPL124W	YPR071W	Q12346	211 aa		4.6	□□□□□ -1.67
SPC29	YPL124W	MET3	P08536	511 aa		4.59	□□□□□ -1.67
SPC29	YPL124W	ATF1	P40353	525 aa		4.59	□□□□□ -1.67
SPC29	YPL124W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SPC29	YPL124W	SPC42	P36094	363 aa		4.58	□□□□□ -1.68
SPC29	YPL124W	PET10	P36139	283 aa		4.58	□□□□□ -1.68
SPC29	YPL124W	RPP1	P38786	293 aa		4.58	□□□□□ -1.68
SPC29	YPL124W	MUP1	P50276	574 aa		4.58	□□□□□ -1.68
SPC29	YPL124W	ASI2	P53895	289 aa		4.58	□□□□□ -1.68
SPC29	YPL124W	ENV7	Q12003	364 aa		4.58	□□□□□ -1.68
SPC29	YPL124W	CAF20	P12962	161 aa	Known RBP	4.57	□□□□□ -1.68
SPC29	YPL124W	CDC11	P32458	415 aa		4.57	□□□□□ -1.68
SPC29	YPL124W	SCT1	P32784	759 aa		4.57	□□□□□ -1.68
SPC29	YPL124W	SDS3	P40505	327 aa		4.57	□□□□□ -1.68
SPC29	YPL124W	FKH2	P41813	862 aa		4.57	□□□□□ -1.68
SPC29	YPL124W	ALR2	P43553	858 aa		4.57	□□□□□ -1.68
SPC29	YPL124W	HBN1	Q96VH4	193 aa		4.57	□□□□□ -1.68
SPC29	YPL124W	MPH2	P0CD99	609 aa		4.56	□□□□□ -1.68
SPC29	YPL124W	RPL8B	P29453	256 aa	Known RBP	4.56	□□□□□ -1.68
SPC29	YPL124W	YBR284W	P38150	797 aa		4.56	□□□□□ -1.68
SPC29	YPL124W	YBR053C	P38235	358 aa		4.56	□□□□□ -1.68
SPC29	YPL124W	YHL017W	P38745	532 aa		4.56	□□□□□ -1.68
SPC29	YPL124W	VHR1	P40522	640 aa		4.56	□□□□□ -1.68
SPC29	YPL124W	MSD1	P15179	658 aa	Known RBP	4.55	□□□□□ -1.68
SPC29	YPL124W	GRX1	P25373	110 aa	Known RBP	4.55	□□□□□ -1.68
SPC29	YPL124W	DAS1	P47005	663 aa		4.55	□□□□□ -1.68
SPC29	YPL124W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SPC29	YPL124W	SNU71	P53207	620 aa	Known RBP	4.55	□□□□□ -1.68
SPC29	YPL124W	DUS1	P53759	423 aa	Known RBP	4.55	□□□□□ -1.68
SPC29	YPL124W	HBT1	Q07653	1046 aa	Known RBP	4.55	□□□□□ -1.68
SPC29	YPL124W	SUT2	Q12286	268 aa		4.55	□□□□□ -1.68
SPC29	YPL124W	RPS9A	O13516	197 aa	Known RBP	4.54	□□□□□ -1.68
SPC29	YPL124W	CYS3	P31373	394 aa	Known RBP	4.54	□□□□□ -1.68
SPC29	YPL124W	CUE2	P36075	443 aa	Known RBP	4.54	□□□□□ -1.68
SPC29	YPL124W	NOG2	P53742	486 aa	Known RBP	4.54	□□□□□ -1.68
SPC29	YPL124W	MUS81	Q04149	632 aa	Predicted RBP	4.54	□□□□□ -1.68
SPC29	YPL124W	UBX5	Q06682	500 aa		4.54	□□□□□ -1.68
SPC29	YPL124W	MRH1	Q12117	320 aa	Predicted RBP	4.54	□□□□□ -1.68
SPC29	YPL124W	SSF2	Q12153	453 aa	Predicted RBP	4.54	□□□□□ -1.68
SPC29	YPL124W	HAL9	Q12180	1030 aa		4.54	□□□□□ -1.68
SPC29	YPL124W	PAM1	P37304	830 aa	Known RBP	4.53	□□□□□ -1.68
SPC29	YPL124W	BDF2	Q07442	638 aa		4.53	□□□□□ -1.68
SPC29	YPL124W	TOP3	P13099	656 aa		4.52	□□□□□ -1.69
SPC29	YPL124W	YJL163C	P46996	555 aa		4.52	□□□□□ -1.69
SPC29	YPL124W	AMA1	P50082	593 aa		4.52	□□□□□ -1.69
SPC29	YPL124W	PUS2	P53167	370 aa		4.52	□□□□□ -1.69
SPC29	YPL124W	ERP6	P53198	216 aa		4.52	□□□□□ -1.69
SPC29	YPL124W	NAN1	Q02931	896 aa	Known RBP	4.52	□□□□□ -1.69
SPC29	YPL124W	EAF1	Q06337	982 aa		4.52	□□□□□ -1.69
SPC29	YPL124W	SPO75	Q07798	868 aa		4.52	□□□□□ -1.69
SPC29	YPL124W	YLR415C	O13578	112 aa		4.51	□□□□□ -1.69
SPC29	YPL124W	EMC3	P36039	253 aa		4.51	□□□□□ -1.69
SPC29	YPL124W	GGA2	P38817	585 aa	Known RBP	4.51	□□□□□ -1.69
SPC29	YPL124W	GPR1	Q12361	961 aa		4.51	□□□□□ -1.69
SPC29	YPL124W	NDJ1	Q12366	352 aa		4.51	□□□□□ -1.69
SPC29	YPL124W	UBP6	P43593	499 aa	Known RBP	4.5	□□□□□ -1.69
SPC29	YPL124W	SSY5	P47002	699 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 81.7 ms