RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W YLR407WQ06070 228 aa2.37□□□□□ -2.03
SEC16YPL085W NCR1Q12200 1170 aa2.37□□□□□ -2.03
SEC16YPL085W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03 RIP-Chip
SEC16YPL085W SFL1P20134 766 aa2.37□□□□□ -2.03
SEC16YPL085W PGM1P33401 570 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W LIN1P38852 340 aaPredicted RBP2.37□□□□□ -2.03
SEC16YPL085W YTA12P40341 825 aa2.37□□□□□ -2.03
SEC16YPL085W ALT2P52892 507 aa2.37□□□□□ -2.03
SEC16YPL085W VIP1Q06685 1146 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W YLR413WQ06689 675 aa2.37□□□□□ -2.03
SEC16YPL085W NOC3Q07896 663 aaPredicted RBP2.37□□□□□ -2.03
SEC16YPL085W ARP7Q12406 477 aa2.37□□□□□ -2.03
SEC16YPL085W SBP1P10080 294 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W IME2P32581 645 aa2.37□□□□□ -2.03
SEC16YPL085W LOS1P33418 1100 aaPredicted RBP2.37□□□□□ -2.03
SEC16YPL085W ECM2P38241 364 aaKnown RBP2.37□□□□□ -2.03
SEC16YPL085W IST3P40565 148 aaPredicted RBP2.37□□□□□ -2.03
SEC16YPL085W CNN1P43618 361 aa2.37□□□□□ -2.03
SEC16YPL085W IML2P47031 731 aa2.37□□□□□ -2.03
SEC16YPL085W DPL1Q05567 589 aa2.37□□□□□ -2.03
SEC16YPL085W CDC37P06101 506 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W ADE3P07245 946 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W ARG82P07250 355 aa2.36□□□□□ -2.03
SEC16YPL085W TRK1P12685 1235 aa2.36□□□□□ -2.03
SEC16YPL085W NPR3P38742 1146 aa2.36□□□□□ -2.03
SEC16YPL085W BRL1P38770 471 aa2.36□□□□□ -2.03
SEC16YPL085W SFB3P38810 929 aa2.36□□□□□ -2.03
SEC16YPL085W CCT4P39078 528 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W VMA10P48836 114 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W GPI8P49018 411 aa2.36□□□□□ -2.03
SEC16YPL085W YGL138CP53122 345 aa2.36□□□□□ -2.03
SEC16YPL085W YGL081WP53156 320 aa2.36□□□□□ -2.03
SEC16YPL085W SPC24Q04477 213 aa2.36□□□□□ -2.03
SEC16YPL085W NUR1Q12066 484 aa2.36□□□□□ -2.03
SEC16YPL085W GIS3Q12418 502 aa2.36□□□□□ -2.03
SEC16YPL085W ADH4P10127 382 aa2.36□□□□□ -2.03
SEC16YPL085W GPA2P10823 449 aa2.36□□□□□ -2.03
SEC16YPL085W SRM1P21827 482 aa2.36□□□□□ -2.03
SEC16YPL085W LCB1P25045 558 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W TOA1P32773 286 aa2.36□□□□□ -2.03
SEC16YPL085W SPC42P36094 363 aa2.36□□□□□ -2.03
SEC16YPL085W RPN10P38886 268 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W VID27P40157 782 aa2.36□□□□□ -2.03
SEC16YPL085W NPA3P47122 385 aa2.36□□□□□ -2.03
SEC16YPL085W YNR061CP53747 219 aa2.36□□□□□ -2.03
SEC16YPL085W CUS1Q02554 436 aaPredicted RBP2.36□□□□□ -2.03
SEC16YPL085W TLG1Q03322 224 aa2.36□□□□□ -2.03
SEC16YPL085W DBP10Q12389 995 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W RRP36Q12481 300 aaPredicted RBP2.36□□□□□ -2.03
SEC16YPL085W CYC8P14922 966 aa2.36□□□□□ -2.03
SEC16YPL085W NPP1P25353 742 aa2.36□□□□□ -2.03
SEC16YPL085W STV1P37296 890 aa2.36□□□□□ -2.03
SEC16YPL085W MMS4P38257 691 aa2.36□□□□□ -2.03
SEC16YPL085W PAN5P38787 379 aa2.36□□□□□ -2.03
SEC16YPL085W RVS167P39743 482 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W TOM22P49334 152 aa2.36□□□□□ -2.03
SEC16YPL085W SLT2Q00772 484 aa2.36□□□□□ -2.03
SEC16YPL085W SPH1Q06160 661 aa2.36□□□□□ -2.03
SEC16YPL085W OMS1Q06668 471 aa2.36□□□□□ -2.03
SEC16YPL085W WHI4Q07655 649 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W SLK19Q08581 821 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W GET3Q12154 354 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W HIS4P00815 799 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W CMP2P14747 604 aa2.36□□□□□ -2.03
SEC16YPL085W RPO26P20435 155 aa2.36□□□□□ -2.03
SEC16YPL085W FAR1P21268 830 aa2.36□□□□□ -2.03
SEC16YPL085W RPN2P32565 945 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W ANP1P32629 500 aa2.36□□□□□ -2.03
SEC16YPL085W RPS0AP32905 252 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W YBL036CP38197 257 aa2.36□□□□□ -2.03
SEC16YPL085W YHR054CP38780 354 aa2.36□□□□□ -2.03
SEC16YPL085W RCF1Q03713 159 aa2.36□□□□□ -2.03
SEC16YPL085W ATG9Q12142 997 aa2.36□□□□□ -2.03
SEC16YPL085W OSW2Q12202 724 aa2.36□□□□□ -2.03
SEC16YPL085W SFM1Q12314 213 aa2.36□□□□□ -2.03
SEC16YPL085W VCX1Q99385 411 aa2.36□□□□□ -2.03
SEC16YPL085W COX6P00427 148 aa2.36□□□□□ -2.03
SEC16YPL085W FUB1P25659 250 aa2.36□□□□□ -2.03
SEC16YPL085W HIS7P33734 552 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W NIT1P40447 199 aa2.36□□□□□ -2.03
SEC16YPL085W FOX2Q02207 900 aaKnown RBP2.36□□□□□ -2.03
SEC16YPL085W NDE2Q07500 545 aa2.36□□□□□ -2.03
SEC16YPL085W ATG20Q07528 640 aa2.36□□□□□ -2.03
SEC16YPL085W PMA1P05030 918 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W PEP5P12868 1029 aa2.35□□□□□ -2.03
SEC16YPL085W KEX2P13134 814 aa2.35□□□□□ -2.03
SEC16YPL085W SPO16P17122 198 aa2.35□□□□□ -2.03
SEC16YPL085W DAP2P18962 818 aa2.35□□□□□ -2.03
SEC16YPL085W SWI4P25302 1093 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W YDJ1P25491 409 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W PBN1P25580 416 aa2.35□□□□□ -2.03
SEC16YPL085W RAD5P32849 1169 aaPredicted RBP2.35□□□□□ -2.03
SEC16YPL085W SPR3P41901 512 aa2.35□□□□□ -2.03
SEC16YPL085W SPO74P45819 413 aa2.35□□□□□ -2.03
SEC16YPL085W RSC2Q06488 889 aa2.35□□□□□ -2.03
SEC16YPL085W NOP6Q07623 225 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W TLG2Q08144 397 aa2.35□□□□□ -2.03
SEC16YPL085W CDC53Q12018 815 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W RKM4Q12504 494 aa2.35□□□□□ -2.03
SEC16YPL085W PCD1Q12524 340 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms