RNA–Protein interactions for RNA: YOL124C

TRM11, Transcript of Catalytic subunit of adoMet-dependent tRNA methyltransferase complex, yeast

Gene TRM11, Length 1,302 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM11	YOL124C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
TRM11	YOL124C	VMA4	P22203	233 aa	Known RBP	4.97	□□□□□ -1.61
TRM11	YOL124C	ICL1	P28240	557 aa	Predicted RBP	4.97	□□□□□ -1.61
TRM11	YOL124C	YIR014W	P40570	242 aa		4.97	□□□□□ -1.61
TRM11	YOL124C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
TRM11	YOL124C	WRS1	Q12109	432 aa	Known RBP	4.97	□□□□□ -1.61
TRM11	YOL124C	TUB2	P02557	457 aa	Known RBP	4.96	□□□□□ -1.62
TRM11	YOL124C	SNF3	P10870	884 aa		4.96	□□□□□ -1.62
TRM11	YOL124C	OPI1	P21957	404 aa		4.96	□□□□□ -1.62
TRM11	YOL124C	AAP1	P37898	856 aa	Known RBP	4.96	□□□□□ -1.62
TRM11	YOL124C	NMD3	P38861	518 aa	Known RBP	4.96	□□□□□ -1.62
TRM11	YOL124C	PRP42	Q03776	544 aa	Known RBP	4.96	□□□□□ -1.62
TRM11	YOL124C	ACK1	Q07622	623 aa	Predicted RBP	4.96	□□□□□ -1.62
TRM11	YOL124C	RIM20	Q12033	661 aa		4.96	□□□□□ -1.62
TRM11	YOL124C	LAM4	P38800	1345 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	VAS1	P07806	1104 aa	Known RBP	4.95	□□□□□ -1.62
TRM11	YOL124C	SPS1	P08458	490 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	MSH3	P25336	1018 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	CTS1	P29029	562 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	SHM2	P37291	469 aa	Known RBP	4.95	□□□□□ -1.62
TRM11	YOL124C	BRN1	P38170	754 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	YHL050C	P38721	697 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	YHR219W	P38900	624 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	YFH7	P43591	353 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	PIB2	P53191	635 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	TOS4	Q06266	489 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	RSC58	Q07979	502 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	RRI2	Q12348	645 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	FRT1	Q99332	602 aa		4.95	□□□□□ -1.62
TRM11	YOL124C	YLR278C	Q05854	1341 aa		4.94	□□□□□ -1.62
TRM11	YOL124C	QNS1	P38795	714 aa	Known RBP	4.94	□□□□□ -1.62
TRM11	YOL124C	YIR042C	P40586	236 aa		4.94	□□□□□ -1.62
TRM11	YOL124C	IOC3	P43596	787 aa		4.94	□□□□□ -1.62
TRM11	YOL124C	YJL045W	P47052	634 aa		4.94	□□□□□ -1.62
TRM11	YOL124C	VPS53	P47061	822 aa		4.94	□□□□□ -1.62
TRM11	YOL124C	RKM2	Q03942	479 aa		4.94	□□□□□ -1.62
TRM11	YOL124C	INM2	Q05533	292 aa		4.94	□□□□□ -1.62
TRM11	YOL124C	NUT2	Q06213	157 aa		4.94	□□□□□ -1.62
TRM11	YOL124C	RRG1	Q12167	365 aa	Predicted RBP	4.94	□□□□□ -1.62
TRM11	YOL124C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	RIP-Chip
TRM11	YOL124C	PTK1	P36002	662 aa	Predicted RBP	4.93	□□□□□ -1.62
TRM11	YOL124C	GRX7	P38068	203 aa		4.93	□□□□□ -1.62
TRM11	YOL124C	PBY1	P38254	753 aa		4.93	□□□□□ -1.62
TRM11	YOL124C	HNT2	P49775	206 aa		4.93	□□□□□ -1.62
TRM11	YOL124C	SQS1	P53866	767 aa	Known RBP	4.93	□□□□□ -1.62
TRM11	YOL124C	CRF1	Q04930	467 aa		4.93	□□□□□ -1.62
TRM11	YOL124C	GPI13	Q07830	1017 aa		4.93	□□□□□ -1.62
TRM11	YOL124C	TAH18	Q12181	623 aa		4.93	□□□□□ -1.62
TRM11	YOL124C	PNS1	Q12412	539 aa		4.93	□□□□□ -1.62
TRM11	YOL124C	TOP1	P04786	769 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	MSM1	P22438	575 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	YSC84	P32793	468 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	AFG2	P32794	780 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	RPT3	P33298	428 aa	Known RBP	4.92	□□□□□ -1.62
TRM11	YOL124C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
TRM11	YOL124C	TAT2	P38967	592 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	STM1	P39015	273 aa	Known RBP	4.92	□□□□□ -1.62
TRM11	YOL124C	HXT13	P39924	564 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	YMR147W	P40218	223 aa	Known RBP	4.92	□□□□□ -1.62
TRM11	YOL124C	IRC8	P47046	822 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	HXT17	P53631	564 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	PEX13	P80667	386 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	YDR132C	Q03900	495 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	SGD1	Q06132	899 aa		4.92	□□□□□ -1.62
TRM11	YOL124C	TPM1	P17536	199 aa	Known RBP	4.91	□□□□□ -1.62
TRM11	YOL124C	RPS7A	P26786	190 aa	Known RBP	4.91	□□□□□ -1.62
TRM11	YOL124C	SLD2	P34252	453 aa		4.91	□□□□□ -1.62
TRM11	YOL124C	SQT1	P35184	431 aa		4.91	□□□□□ -1.62
TRM11	YOL124C	CCZ1	P38273	704 aa		4.91	□□□□□ -1.62
TRM11	YOL124C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	RIP-Chip
TRM11	YOL124C	RSM26	P47141	266 aa		4.91	□□□□□ -1.62
TRM11	YOL124C	ENP2	P48234	707 aa	Known RBP	4.91	□□□□□ -1.62
TRM11	YOL124C	YGR117C	P53270	476 aa		4.91	□□□□□ -1.62
TRM11	YOL124C	YNR063W	P53749	607 aa		4.91	□□□□□ -1.62
TRM11	YOL124C	TIM50	Q02776	476 aa		4.91	□□□□□ -1.62
TRM11	YOL124C	RMD1	Q03441	430 aa		4.91	□□□□□ -1.62
TRM11	YOL124C	FPR4	Q06205	392 aa	Predicted RBP	4.91	□□□□□ -1.62
TRM11	YOL124C	PPM2	Q08282	695 aa		4.91	□□□□□ -1.62
TRM11	YOL124C	SSF2	Q12153	453 aa	Predicted RBP	4.91	□□□□□ -1.62
TRM11	YOL124C	ADD66	P36040	267 aa		4.9	□□□□□ -1.63
TRM11	YOL124C	STV1	P37296	890 aa		4.9	□□□□□ -1.63
TRM11	YOL124C	LAM1	P38851	1228 aa		4.9	□□□□□ -1.63
TRM11	YOL124C	SPO22	P40511	975 aa		4.9	□□□□□ -1.63
TRM11	YOL124C	GSM1	P42950	618 aa		4.9	□□□□□ -1.63
TRM11	YOL124C	SPT20	P50875	604 aa		4.9	□□□□□ -1.63
TRM11	YOL124C	MTC3	P53077	123 aa		4.9	□□□□□ -1.63
TRM11	YOL124C	MSC6	Q08818	692 aa	Known RBP	4.9	□□□□□ -1.63
TRM11	YOL124C	TAD3	Q9URQ3	322 aa		4.9	□□□□□ -1.63
TRM11	YOL124C	TOM1	Q03280	3268 aa		4.9	□□□□□ -1.63
TRM11	YOL124C	MYO1	P08964	1928 aa		4.89	□□□□□ -1.63
TRM11	YOL124C	GCD6	P32501	712 aa	Known RBP	4.89	□□□□□ -1.63
TRM11	YOL124C	PPX1	P38698	397 aa		4.89	□□□□□ -1.63
TRM11	YOL124C	CRG1	P38892	291 aa	RIP-Chip data	4.89	□□□□□ -1.63	not detected
TRM11	YOL124C	MEF2	P39677	819 aa		4.89	□□□□□ -1.63
TRM11	YOL124C	PIP2	P52960	996 aa		4.89	□□□□□ -1.63
TRM11	YOL124C	SEN54	Q02825	467 aa	Predicted RBP	4.89	□□□□□ -1.63
TRM11	YOL124C	GCN5	Q03330	439 aa		4.89	□□□□□ -1.63
TRM11	YOL124C	RNR2	P09938	399 aa	Known RBP	4.88	□□□□□ -1.63
TRM11	YOL124C	COQ1	P18900	473 aa		4.88	□□□□□ -1.63
TRM11	YOL124C	PEP3	P27801	918 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 90.9 ms