RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W NTO1Q12311 748 aa3.47□□□□□ -1.85
SNF12YNR023W PHR1P05066 565 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
SNF12YNR023W YAP1801P38856 637 aa3.47□□□□□ -1.85
SNF12YNR023W RSM24Q03976 319 aa3.47□□□□□ -1.85
SNF12YNR023W YPR196WQ06595 470 aa3.47□□□□□ -1.85
SNF12YNR023W APL1P27351 700 aa3.46□□□□□ -1.86
SNF12YNR023W SPC29P33419 253 aa3.46□□□□□ -1.86
SNF12YNR023W EMC3P36039 253 aa3.46□□□□□ -1.86
SNF12YNR023W ECM21P38167 1117 aaKnown RBP3.46□□□□□ -1.86
SNF12YNR023W YJR142WP47173 342 aa3.46□□□□□ -1.86
SNF12YNR023W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
SNF12YNR023W ROT1Q03691 256 aa3.46□□□□□ -1.86
SNF12YNR023W SIZ1Q04195 904 aa3.46□□□□□ -1.86
SNF12YNR023W MPH2P0CD99 609 aa3.45□□□□□ -1.86
SNF12YNR023W SRM1P21827 482 aa3.45□□□□□ -1.86
SNF12YNR023W STE11P23561 717 aa3.45□□□□□ -1.86
SNF12YNR023W ERT1P38140 529 aa3.45□□□□□ -1.86
SNF12YNR023W DSS1P39112 969 aa3.45□□□□□ -1.86
SNF12YNR023W YGR283CP53336 341 aaPredicted RBP3.45□□□□□ -1.86
SNF12YNR023W ATP25Q03153 612 aa3.45□□□□□ -1.86
SNF12YNR023W TMA10Q06177 86 aa3.45□□□□□ -1.86
SNF12YNR023W ENV7Q12003 364 aa3.45□□□□□ -1.86
SNF12YNR023W CYC1P00044 109 aaPredicted RBP3.44□□□□□ -1.86
SNF12YNR023W RPL8AP17076 256 aaKnown RBP3.44□□□□□ -1.86
SNF12YNR023W NPP2P39997 493 aa3.44□□□□□ -1.86
SNF12YNR023W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SNF12YNR023W SFB2P53953 876 aa3.44□□□□□ -1.86
SNF12YNR023W DNM1P54861 757 aa3.44□□□□□ -1.86
SNF12YNR023W TFB2Q02939 513 aa3.44□□□□□ -1.86
SNF12YNR023W VPS30Q02948 557 aa3.44□□□□□ -1.86
SNF12YNR023W MSC2Q03455 724 aa3.44□□□□□ -1.86
SNF12YNR023W YDR514CQ04408 483 aa3.44□□□□□ -1.86
SNF12YNR023W REH1Q06709 432 aa3.44□□□□□ -1.86
SNF12YNR023W RFA1P22336 621 aaKnown RBP3.44□□□□□ -1.86
SNF12YNR023W VBA3P25594 458 aa3.44□□□□□ -1.86
SNF12YNR023W YEL1P34225 687 aa3.44□□□□□ -1.86
SNF12YNR023W CHS7P38843 316 aa3.44□□□□□ -1.86
SNF12YNR023W GYP8P43570 497 aa3.44□□□□□ -1.86
SNF12YNR023W ADR1P07248 1323 aa3.44□□□□□ -1.86
SNF12YNR023W HSF1P10961 833 aa3.43□□□□□ -1.86
SNF12YNR023W MEF1P25039 761 aa3.43□□□□□ -1.86
SNF12YNR023W STO1P34160 861 aaKnown RBP3.43□□□□□ -1.86
SNF12YNR023W MTC2P34246 357 aa3.43□□□□□ -1.86
SNF12YNR023W CRP1P38845 465 aaKnown RBP3.43□□□□□ -1.86
SNF12YNR023W NOG2P53742 486 aaKnown RBP3.43□□□□□ -1.86
SNF12YNR023W YNL193WP53870 558 aa3.43□□□□□ -1.86
SNF12YNR023W RXT3Q07458 294 aa3.43□□□□□ -1.86
SNF12YNR023W XYL2Q07993 356 aa3.43□□□□□ -1.86
SNF12YNR023W MET7Q08645 548 aa3.43□□□□□ -1.86
SNF12YNR023W RIB2Q12362 591 aaKnown RBP3.43□□□□□ -1.86
SNF12YNR023W CDC9P04819 755 aa3.42□□□□□ -1.86
SNF12YNR023W NOT3P06102 836 aaKnown RBP3.42□□□□□ -1.86
SNF12YNR023W CAF16P43569 289 aa3.42□□□□□ -1.86
SNF12YNR023W HLJ1P48353 224 aa3.42□□□□□ -1.86
SNF12YNR023W PSP2P50109 593 aaKnown RBP3.42□□□□□ -1.86
SNF12YNR023W UBA2P52488 636 aa3.42□□□□□ -1.86
SNF12YNR023W RAI1P53063 387 aaKnown RBP3.42□□□□□ -1.86
SNF12YNR023W COG8Q04632 607 aa3.42□□□□□ -1.86
SNF12YNR023W RSC3Q06639 885 aa3.42□□□□□ -1.86
SNF12YNR023W RPP2AP05319 106 aaKnown RBP3.41□□□□□ -1.86
SNF12YNR023W SRD1P09007 221 aa3.41□□□□□ -1.86
SNF12YNR023W TSR4P25040 408 aa3.41□□□□□ -1.86
SNF12YNR023W STE13P33894 931 aa3.41□□□□□ -1.86
SNF12YNR023W ATG19P35193 415 aa3.41□□□□□ -1.86
SNF12YNR023W UBP12P39538 1254 aa3.41□□□□□ -1.86
SNF12YNR023W ZRG8P40021 1076 aa3.41□□□□□ -1.86
SNF12YNR023W PMT3P47190 753 aa3.41□□□□□ -1.86
SNF12YNR023W YGR012WP53206 393 aa3.41□□□□□ -1.86
SNF12YNR023W YNR029CP53729 429 aaKnown RBP3.41□□□□□ -1.86
SNF12YNR023W ACK1Q07622 623 aaPredicted RBP3.41□□□□□ -1.86
SNF12YNR023W CMP2P14747 604 aa3.41□□□□□ -1.86
SNF12YNR023W URA1P28272 314 aaPredicted RBP3.41□□□□□ -1.86
SNF12YNR023W GRX4P32642 244 aa3.41□□□□□ -1.86
SNF12YNR023W TYE7P33122 291 aaPredicted RBP3.41□□□□□ -1.86
SNF12YNR023W ZDS1P50111 915 aaKnown RBP3.41□□□□□ -1.86
SNF12YNR023W PBP1P53297 722 aaKnown RBP3.41□□□□□ -1.86
SNF12YNR023W CDA1Q06702 301 aa3.41□□□□□ -1.86
SNF12YNR023W YLR001CQ07895 862 aa3.41□□□□□ -1.86
SNF12YNR023W RPS9AO13516 197 aaKnown RBP3.4□□□□□ -1.87
SNF12YNR023W ENA1P13587 1091 aa3.4□□□□□ -1.87
SNF12YNR023W DAL7P21826 554 aa3.4□□□□□ -1.87
SNF12YNR023W SRP101P32916 621 aa3.4□□□□□ -1.87
SNF12YNR023W MND2P40577 368 aa3.4□□□□□ -1.87
SNF12YNR023W TY4A-JP47023 414 aa3.4□□□□□ -1.87
SNF12YNR023W PHO23P50947 330 aa3.4□□□□□ -1.87
SNF12YNR023W TAD1P53065 400 aa3.4□□□□□ -1.87
SNF12YNR023W SDA1P53313 767 aaKnown RBP3.4□□□□□ -1.87
SNF12YNR023W SNP1Q00916 300 aaPredicted RBP3.4□□□□□ -1.87
SNF12YNR023W ENA2Q01896 1091 aa3.4□□□□□ -1.87
SNF12YNR023W YKR011CQ02209 353 aa3.4□□□□□ -1.87
SNF12YNR023W DUS4Q06063 367 aa3.4□□□□□ -1.87
SNF12YNR023W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
SNF12YNR023W ENA5Q12691 1091 aa3.4□□□□□ -1.87
SNF12YNR023W GAL10P04397 699 aa3.39□□□□□ -1.87
SNF12YNR023W SSB1P11484 613 aaKnown RBP3.39□□□□□ -1.87
SNF12YNR023W CDC20P26309 610 aa3.39□□□□□ -1.87
SNF12YNR023W CYS3P31373 394 aaKnown RBP3.39□□□□□ -1.87
SNF12YNR023W LST4P34239 828 aa3.39□□□□□ -1.87
SNF12YNR023W MCD4P36051 919 aa3.39□□□□□ -1.87
SNF12YNR023W RPN10P38886 268 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms