RNA–Protein interactions for RNA: YLR249W

YEF3, Transcript of Gamma subunit of translational elongation factor eEF1B, yeast

Gene YEF3, Length 3,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF3	YLR249W	RGA1	P39083	1007 aa		2.6	□□□□□ -1.99
YEF3	YLR249W	IES5	P40060	125 aa		2.6	□□□□□ -1.99
YEF3	YLR249W	BUD6	P41697	788 aa		2.6	□□□□□ -1.99
YEF3	YLR249W	ACF4	P47129	309 aa		2.6	□□□□□ -1.99
YEF3	YLR249W	YGL138C	P53122	345 aa		2.6	□□□□□ -1.99
YEF3	YLR249W	FDC1	Q03034	503 aa		2.6	□□□□□ -1.99
YEF3	YLR249W	ERO1	Q03103	563 aa		2.6	□□□□□ -1.99
YEF3	YLR249W	FCP1	Q03254	732 aa		2.6	□□□□□ -1.99
YEF3	YLR249W	TSR2	Q06672	205 aa	Known RBP	2.6	□□□□□ -1.99
YEF3	YLR249W	MCD1	Q12158	566 aa		2.6	□□□□□ -1.99
YEF3	YLR249W	SEC39	Q12745	709 aa		2.6	□□□□□ -1.99
YEF3	YLR249W	FOB1	O13329	566 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	TRP2	P00899	507 aa	Known RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	MPH2	P0CD99	609 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	SSB1	P11484	613 aa	Known RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	STE6	P12866	1290 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
YEF3	YLR249W	COQ1	P18900	473 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	CKA2	P19454	339 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	CLB3	P24870	427 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	SWI4	P25302	1093 aa	Known RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	AAD3	P25612	363 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	URA1	P28272	314 aa	Predicted RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	TPS2	P31688	896 aa	Known RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	PLC1	P32383	869 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	HIR1	P32479	840 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	CSE1	P33307	960 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	ABZ1	P37254	787 aa	Predicted RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	HSM3	P38348	480 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	CIN4	P39110	191 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	SSB2	P40150	613 aa	Known RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	MET18	P40469	1032 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	YFL066C	P43538	392 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	RAD33	Q04231	177 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	ERB1	Q04660	807 aa	Known RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	NEW1	Q08972	1196 aa	Known RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	DCS2	Q12123	353 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	GET3	Q12154	354 aa	Known RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	RAD61	Q99359	647 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	HOM3	P10869	527 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	SPO11	P23179	398 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	MGM1	P32266	881 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	SMY1	P32364	656 aa	Known RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	PET112	P33893	541 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	RFC5	P38251	354 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	VPS8	P39702	1274 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	BUD16	P39988	312 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	ROG3	P43602	733 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	IML2	P47031	731 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	CSN12	P47130	423 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	CAF130	P53280	1122 aa	Predicted RBP	2.59	□□□□□ -1.99
YEF3	YLR249W	VPS75	P53853	264 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	APP1	P53933	587 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	MUB1	Q03162	620 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	TFB3	Q03290	321 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	SRC1	Q03707	834 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	SAS4	Q04003	481 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	UFO1	Q04511	668 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	YCG1	Q06680	1035 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	HMI1	Q12039	706 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	TIP41	Q12199	356 aa		2.59	□□□□□ -1.99
YEF3	YLR249W	JIP3	O13555	125 aa		2.59	□□□□□ -2
YEF3	YLR249W	PKC1	P24583	1151 aa		2.59	□□□□□ -2
YEF3	YLR249W	LCB1	P25045	558 aa	Known RBP	2.59	□□□□□ -2
YEF3	YLR249W	MRC1	P25588	1096 aa		2.59	□□□□□ -2
YEF3	YLR249W	DAL80	P26343	269 aa		2.59	□□□□□ -2
YEF3	YLR249W	NUD1	P32336	851 aa		2.59	□□□□□ -2
YEF3	YLR249W	SRP40	P32583	406 aa	Predicted RBP	2.59	□□□□□ -2
YEF3	YLR249W	MAC1	P35192	417 aa		2.59	□□□□□ -2
YEF3	YLR249W	MIA40	P36046	403 aa		2.59	□□□□□ -2
YEF3	YLR249W	GRX7	P38068	203 aa		2.59	□□□□□ -2
YEF3	YLR249W	MAK5	P38112	773 aa	Predicted RBP	2.59	□□□□□ -2
YEF3	YLR249W	YBL086C	P38177	466 aa		2.59	□□□□□ -2
YEF3	YLR249W	RPN10	P38886	268 aa	Known RBP	2.59	□□□□□ -2
YEF3	YLR249W	SMC2	P38989	1170 aa	Known RBP	2.59	□□□□□ -2
YEF3	YLR249W	CCT3	P39077	534 aa	Known RBP	2.59	□□□□□ -2
YEF3	YLR249W	YER130C	P39959	443 aa		2.59	□□□□□ -2
YEF3	YLR249W	DCP2	P53550	970 aa	Known RBP	2.59	□□□□□ -2
YEF3	YLR249W	BET4	Q00618	327 aa		2.59	□□□□□ -2
YEF3	YLR249W	UBP2	Q01476	1272 aa		2.59	□□□□□ -2
YEF3	YLR249W	GIC2	Q06648	383 aa		2.59	□□□□□ -2
YEF3	YLR249W	THI3	Q07471	609 aa		2.59	□□□□□ -2
YEF3	YLR249W	PMS1	P14242	873 aa		2.58	□□□□□ -2
YEF3	YLR249W	HCA4	P20448	770 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	TRX2	P22803	104 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	RSC6	P25632	483 aa		2.58	□□□□□ -2
YEF3	YLR249W	DPB3	P27344	201 aa		2.58	□□□□□ -2
YEF3	YLR249W	HXT1	P32465	570 aa		2.58	□□□□□ -2
YEF3	YLR249W	HIR2	P32480	875 aa		2.58	□□□□□ -2
YEF3	YLR249W	YME2	P32843	850 aa		2.58	□□□□□ -2
YEF3	YLR249W	DID4	P36108	232 aa		2.58	□□□□□ -2
YEF3	YLR249W	BOI1	P38041	980 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	PSY4	P38193	441 aa		2.58	□□□□□ -2
YEF3	YLR249W	KIC1	P38692	1080 aa		2.58	□□□□□ -2
YEF3	YLR249W	YHL050C	P38721	697 aa		2.58	□□□□□ -2
YEF3	YLR249W	SPL2	P38839	148 aa		2.58	□□□□□ -2
YEF3	YLR249W	MXR1	P40029	184 aa		2.58	□□□□□ -2
YEF3	YLR249W	YFH7	P43591	353 aa		2.58	□□□□□ -2
YEF3	YLR249W	FYV8	P46949	817 aa	Known RBP	2.58	□□□□□ -2
YEF3	YLR249W	RPA14	P50106	137 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 80.2 ms