RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS34	YLR240W	TY1B-ER2	Q03619	1755 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	TY1B-MR1	Q04214	1755 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	TY1B-MR2	Q04670	1755 aa	Known RBP	2.69	□□□□□ -1.98
VPS34	YLR240W	TY1B-LR1	Q12088	1755 aa	Known RBP	2.69	□□□□□ -1.98
VPS34	YLR240W	TY1B-NL1	Q12112	1755 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	TY1B-GR1	Q12141	1755 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	TY1B-BL	Q12490	1755 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	SRP101	P32916	621 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	YRO2	P38079	344 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	UBP5	P39944	805 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	CCM1	P48237	864 aa	Predicted RBP	2.69	□□□□□ -1.98
VPS34	YLR240W	VPS62	P53285	467 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	HMI1	Q12039	706 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	HBN1	Q96VH4	193 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	SPP41	P38904	1435 aa		2.69	□□□□□ -1.98
VPS34	YLR240W	RPO21	P04050	1733 aa	Known RBP	2.69	□□□□□ -1.98
VPS34	YLR240W	VTH1	P40438	1549 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	VTH2	P40890	1549 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	PAN1	P32521	1480 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	PET10	P36139	283 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	ERT1	P38140	529 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	TOK1	P40310	691 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	SPT20	P50875	604 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	RXT3	Q07458	294 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	ADY3	Q07732	790 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	GPB1	Q08886	897 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	ULS1	Q08562	1619 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	RPP2A	P05319	106 aa	Known RBP	2.68	□□□□□ -1.98
VPS34	YLR240W	HSF1	P10961	833 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	ENA1	P13587	1091 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	MSD1	P15179	658 aa	Known RBP	2.68	□□□□□ -1.98
VPS34	YLR240W	TOD6	P34219	525 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	POA1	P38218	177 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	GGA2	P38817	585 aa	Known RBP	2.68	□□□□□ -1.98
VPS34	YLR240W	HUL4	P40985	892 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	GTF1	P53260	183 aa	Predicted RBP	2.68	□□□□□ -1.98
VPS34	YLR240W	ORC1	P54784	914 aa	Predicted RBP	2.68	□□□□□ -1.98
VPS34	YLR240W	ENA2	Q01896	1091 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	RPN4	Q03465	531 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	YPR196W	Q06595	470 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	YDL124W	Q07551	312 aa	Known RBP	2.68	□□□□□ -1.98
VPS34	YLR240W	TPO1	Q07824	586 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	PPM2	Q08282	695 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	ENA5	Q12691	1091 aa		2.68	□□□□□ -1.98
VPS34	YLR240W	RPA190	P10964	1664 aa	Known RBP	2.67	□□□□□ -1.98
VPS34	YLR240W	CAN1	P04817	590 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	SPE1	P08432	466 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	GAL11	P19659	1081 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
VPS34	YLR240W	CDC20	P26309	610 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	YBR284W	P38150	797 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	RSP5	P39940	809 aa	Known RBP	2.67	□□□□□ -1.98
VPS34	YLR240W	MET12	P46151	657 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	PSP2	P50109	593 aa	Known RBP	2.67	□□□□□ -1.98
VPS34	YLR240W	YAP6	Q03935	383 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	ACK1	Q07622	623 aa	Predicted RBP	2.67	□□□□□ -1.98
VPS34	YLR240W	NOP12	Q08208	459 aa	Known RBP	2.67	□□□□□ -1.98
VPS34	YLR240W	PDR10	P51533	1564 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	PDR15	Q04182	1529 aa	Known RBP	2.67	□□□□□ -1.98
VPS34	YLR240W	TOP3	P13099	656 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	EMC1	P25574	760 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	SRP40	P32583	406 aa	Predicted RBP	2.67	□□□□□ -1.98
VPS34	YLR240W	REC104	P33323	182 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	ATG19	P35193	415 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	RAI1	P53063	387 aa	Known RBP	2.67	□□□□□ -1.98
VPS34	YLR240W	YOR131C	Q12486	218 aa		2.67	□□□□□ -1.98
VPS34	YLR240W	CAT8	P39113	1433 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	TSC11	P40061	1430 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	GEA2	P39993	1459 aa	Known RBP	2.66	□□□□□ -1.98
VPS34	YLR240W	BET3	P36149	193 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	UBP6	P43593	499 aa	Known RBP	2.66	□□□□□ -1.98
VPS34	YLR240W	GCV2	P49095	1034 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	YPR071W	Q12346	211 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	SNT2	P53127	1403 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	IRC20	Q06554	1556 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	YLR358C	O13565	187 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	YKL091C	P33324	310 aa	Known RBP	2.66	□□□□□ -1.98
VPS34	YLR240W	FLR1	P38124	548 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
VPS34	YLR240W	BUD6	P41697	788 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	RTA1	P53047	317 aa		2.66	□□□□□ -1.98
VPS34	YLR240W	HIS5	P07172	385 aa		2.65	□□□□□ -1.98
VPS34	YLR240W	CHZ1	P40019	153 aa	Predicted RBP	2.65	□□□□□ -1.98
VPS34	YLR240W	URM1	P40554	99 aa	Predicted RBP	2.65	□□□□□ -1.98
VPS34	YLR240W	CLU1	Q03690	1277 aa	Known RBP	2.65	□□□□□ -1.98
VPS34	YLR240W	ENV7	Q12003	364 aa		2.65	□□□□□ -1.98
VPS34	YLR240W	TRM732	Q03496	1420 aa		2.65	□□□□□ -1.99
VPS34	YLR240W	IKI3	Q06706	1349 aa	Known RBP	2.65	□□□□□ -1.99
VPS34	YLR240W	NOT3	P06102	836 aa	Known RBP	2.65	□□□□□ -1.99
VPS34	YLR240W	TOM70	P07213	617 aa	Known RBP	2.65	□□□□□ -1.99
VPS34	YLR240W	STE11	P23561	717 aa		2.65	□□□□□ -1.99
VPS34	YLR240W	STE13	P33894	931 aa		2.65	□□□□□ -1.99
VPS34	YLR240W	YLR224W	Q05947	369 aa		2.65	□□□□□ -1.99
VPS34	YLR240W	ESC8	Q08119	714 aa		2.65	□□□□□ -1.99
VPS34	YLR240W	YBT1	P32386	1661 aa		2.64	□□□□□ -1.99
VPS34	YLR240W	MPH2	P0CD99	609 aa		2.64	□□□□□ -1.99
VPS34	YLR240W	LST4	P34239	828 aa		2.64	□□□□□ -1.99
VPS34	YLR240W	CHA4	P43634	648 aa		2.64	□□□□□ -1.99
VPS34	YLR240W	FPR4	Q06205	392 aa	Predicted RBP	2.64	□□□□□ -1.99
VPS34	YLR240W	URA1	P28272	314 aa	Predicted RBP	2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms