RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	PRP22	P24384	1145 aa	Known RBP	10.65	□□□□□ -0.7
SAM1	YLR180W	MRPL10	P36520	322 aa		10.65	□□□□□ -0.7
SAM1	YLR180W	YML083C	Q04526	418 aa		10.65	□□□□□ -0.7
SAM1	YLR180W	TRP2	P00899	507 aa	Known RBP	10.64	□□□□□ -0.71
SAM1	YLR180W	SPE1	P08432	466 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	GPA1	P08539	472 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	SRD1	P09007	221 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	CUP1-1	P0CX80	61 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	CUP1-2	P0CX81	61 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	RGP1	P16664	663 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	HCM1	P25364	564 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	RAD27	P26793	382 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	SEG2	P34250	1132 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	PTC4	P38089	393 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	YER130C	P39959	443 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	CUE3	P53137	624 aa	Known RBP	10.64	□□□□□ -0.71
SAM1	YLR180W	MFB1	Q04922	465 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	NBL1	Q3E7Y6	73 aa		10.64	□□□□□ -0.71
SAM1	YLR180W	RPL40A	P0CH08	128 aa	Known RBP	10.63	□□□□□ -0.71
SAM1	YLR180W	RPL40B	P0CH09	128 aa	Known RBP	10.63	□□□□□ -0.71
SAM1	YLR180W	HMG2	P12684	1045 aa		10.63	□□□□□ -0.71
SAM1	YLR180W	HEL1	P36113	551 aa		10.63	□□□□□ -0.71
SAM1	YLR180W	PCM1	P38628	557 aa	Known RBP	10.63	□□□□□ -0.71
SAM1	YLR180W	RRM3	P38766	723 aa		10.63	□□□□□ -0.71
SAM1	YLR180W	TIP41	Q12199	356 aa		10.63	□□□□□ -0.71
SAM1	YLR180W	TRS33	Q99394	268 aa		10.63	□□□□□ -0.71
SAM1	YLR180W	DPH2	P32461	534 aa		10.62	□□□□□ -0.71
SAM1	YLR180W	RPT1	P33299	467 aa	Known RBP	10.62	□□□□□ -0.71
SAM1	YLR180W	MPE1	P35728	441 aa	Known RBP	10.62	□□□□□ -0.71
SAM1	YLR180W	MIC60	P36112	540 aa		10.62	□□□□□ -0.71
SAM1	YLR180W	AVT1	P47082	602 aa		10.62	□□□□□ -0.71
SAM1	YLR180W	RTC4	P53850	401 aa		10.62	□□□□□ -0.71
SAM1	YLR180W	SDH5	Q08230	162 aa		10.62	□□□□□ -0.71
SAM1	YLR180W	PLP2	Q12017	286 aa		10.62	□□□□□ -0.71
SAM1	YLR180W	IRA2	P19158	3079 aa		10.61	□□□□□ -0.71
SAM1	YLR180W	TCP1	P12612	559 aa	Known RBP	10.61	□□□□□ -0.71
SAM1	YLR180W	THR4	P16120	514 aa	Known RBP	10.61	□□□□□ -0.71
SAM1	YLR180W	ATE1	P16639	503 aa		10.61	□□□□□ -0.71
SAM1	YLR180W	VPS1	P21576	704 aa	Known RBP	10.61	□□□□□ -0.71
SAM1	YLR180W	URA1	P28272	314 aa	Predicted RBP	10.61	□□□□□ -0.71
SAM1	YLR180W	EBP2	P36049	427 aa	Known RBP	10.61	□□□□□ -0.71
SAM1	YLR180W	RPN3	P40016	523 aa	Known RBP	10.61	□□□□□ -0.71
SAM1	YLR180W	ATG32	P40458	529 aa		10.61	□□□□□ -0.71
SAM1	YLR180W	ISM1	P48526	1002 aa		10.61	□□□□□ -0.71
SAM1	YLR180W	MNP1	P53163	194 aa	Predicted RBP	10.61	□□□□□ -0.71
SAM1	YLR180W	YLH47	Q06493	454 aa		10.61	□□□□□ -0.71
SAM1	YLR180W	OSW2	Q12202	724 aa		10.61	□□□□□ -0.71
SAM1	YLR180W	SEN1	Q00416	2231 aa	Known RBP	10.61	□□□□□ -0.71
SAM1	YLR180W	COX4	P04037	155 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	HAP2	P06774	265 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	HIS5	P07172	385 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	TOM70	P07213	617 aa	Known RBP	10.6	□□□□□ -0.71
SAM1	YLR180W	ATP1	P07251	545 aa	Known RBP	10.6	□□□□□ -0.71
SAM1	YLR180W	CIT2	P08679	460 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	MAS1	P10507	462 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	ALG1	P16661	449 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	BMH1	P29311	267 aa	Known RBP	10.6	□□□□□ -0.71
SAM1	YLR180W	RAD54	P32863	898 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	SKG6	P32900	734 aa	Predicted RBP	10.6	□□□□□ -0.71
SAM1	YLR180W	MNR2	P35724	969 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	MRX3	P38172	270 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	ULP2	P40537	1034 aa	Predicted RBP	10.6	□□□□□ -0.71
SAM1	YLR180W	NUT1	P53114	1132 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	RTT102	P53330	157 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	PGA2	P53903	129 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	RCR2	Q03446	210 aa	Known RBP	10.6	□□□□□ -0.71
SAM1	YLR180W	TRS120	Q04183	1289 aa		10.6	□□□□□ -0.71
SAM1	YLR180W	DNL4	Q08387	944 aa	Predicted RBP	10.6	□□□□□ -0.71
SAM1	YLR180W	SLK19	Q08581	821 aa	Known RBP	10.6	□□□□□ -0.71
SAM1	YLR180W	SGF29	P25554	259 aa		10.59	□□□□□ -0.71
SAM1	YLR180W	KTR4	P38131	464 aa		10.59	□□□□□ -0.71
SAM1	YLR180W	YNL146W	P53906	100 aa		10.59	□□□□□ -0.71
SAM1	YLR180W	NCS2	P53923	493 aa	Predicted RBP	10.59	□□□□□ -0.71
SAM1	YLR180W	IES4	Q08561	116 aa		10.59	□□□□□ -0.71
SAM1	YLR180W	YOR296W	Q08748	1289 aa		10.59	□□□□□ -0.71
SAM1	YLR180W	PGS1	P25578	521 aa		10.58	□□□□□ -0.72
SAM1	YLR180W	VPH1	P32563	840 aa	Known RBP	10.58	□□□□□ -0.72
SAM1	YLR180W	HMT1	P38074	348 aa		10.58	□□□□□ -0.72
SAM1	YLR180W	VID24	P38263	362 aa		10.58	□□□□□ -0.72
SAM1	YLR180W	LSB6	P42951	607 aa		10.58	□□□□□ -0.72
SAM1	YLR180W	LEE1	Q02799	301 aa	Known RBP	10.58	□□□□□ -0.72
SAM1	YLR180W	NSE5	Q03718	556 aa		10.58	□□□□□ -0.72
SAM1	YLR180W	GSY2	P27472	705 aa		10.57	□□□□□ -0.72
SAM1	YLR180W	COT1	P32798	439 aa		10.57	□□□□□ -0.72
SAM1	YLR180W	TFG2	P41896	400 aa	Predicted RBP	10.57	□□□□□ -0.72
SAM1	YLR180W	DAK2	P43550	591 aa		10.57	□□□□□ -0.72
SAM1	YLR180W	YGR130C	P53278	816 aa		10.57	□□□□□ -0.72
SAM1	YLR180W	YDR090C	Q03193	310 aa		10.57	□□□□□ -0.72
SAM1	YLR180W	NSE1	Q07913	336 aa		10.57	□□□□□ -0.72
SAM1	YLR180W	REC8	Q12188	680 aa		10.57	□□□□□ -0.72
SAM1	YLR180W	PTC5	Q12511	572 aa		10.57	□□□□□ -0.72
SAM1	YLR180W	ZPS1	Q12512	249 aa		10.57	□□□□□ -0.72
SAM1	YLR180W	SMC6	Q12749	1114 aa		10.57	□□□□□ -0.72
SAM1	YLR180W	PDE1	P22434	369 aa		10.56	□□□□□ -0.72
SAM1	YLR180W	PEX34	P25584	144 aa		10.56	□□□□□ -0.72
SAM1	YLR180W	STT3	P39007	718 aa	Known RBP	10.56	□□□□□ -0.72
SAM1	YLR180W	YER186C	P40101	306 aa		10.56	□□□□□ -0.72
SAM1	YLR180W	CUL3	P53202	744 aa		10.56	□□□□□ -0.72
SAM1	YLR180W	SFB2	P53953	876 aa		10.56	□□□□□ -0.72
SAM1	YLR180W	ALG11	P53954	548 aa	Known RBP	10.56	□□□□□ -0.72

Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms