RNA–Protein interactions for RNA: YLR120C

YPS1, Transcript of Aspartic protease, yeast

Gene YPS1, Length 1,710 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS1	YLR120C	ESBP6	P53918	673 aa		13.68	□□□□□ -0.22
YPS1	YLR120C	URH1	Q04179	340 aa		13.68	□□□□□ -0.22
YPS1	YLR120C	YKR018C	P36114	725 aa		13.67	□□□□□ -0.22
YPS1	YLR120C	ERC1	P38767	581 aa		13.67	□□□□□ -0.22
YPS1	YLR120C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	13.67	□□□□□ -0.22	RIP-Chip
YPS1	YLR120C	DIG1	Q03063	452 aa	Known RBP	13.67	□□□□□ -0.22
YPS1	YLR120C	YML082W	Q04533	649 aa	Known RBP	13.67	□□□□□ -0.22
YPS1	YLR120C	ISA1	Q07821	250 aa	Predicted RBP	13.67	□□□□□ -0.22
YPS1	YLR120C	CDC48	P25694	835 aa	Known RBP	13.67	□□□□□ -0.22
YPS1	YLR120C	UTR4	P32626	227 aa		13.67	□□□□□ -0.22
YPS1	YLR120C	ZRT2	Q12436	422 aa		13.67	□□□□□ -0.22
YPS1	YLR120C	MSH1	P25846	959 aa		13.66	□□□□□ -0.22
YPS1	YLR120C	RAD54	P32863	898 aa		13.66	□□□□□ -0.22
YPS1	YLR120C	TDA3	P38758	523 aa		13.66	□□□□□ -0.22
YPS1	YLR120C	DON1	Q05610	365 aa		13.66	□□□□□ -0.22
YPS1	YLR120C	NCR1	Q12200	1170 aa		13.66	□□□□□ -0.22
YPS1	YLR120C	ECM32	P32644	1121 aa	Known RBP	13.65	□□□□□ -0.22
YPS1	YLR120C	SYH1	Q02875	849 aa	Known RBP	13.65	□□□□□ -0.22
YPS1	YLR120C	YMR018W	Q04364	514 aa		13.65	□□□□□ -0.22
YPS1	YLR120C	TYW1	Q08960	810 aa	Known RBP	13.65	□□□□□ -0.22
YPS1	YLR120C	GCG1	P32656	232 aa	Known RBP	13.64	□□□□□ -0.23
YPS1	YLR120C	YKL050C	P35736	922 aa		13.64	□□□□□ -0.23
YPS1	YLR120C	VPS41	P38959	992 aa		13.64	□□□□□ -0.23
YPS1	YLR120C	CTK3	P46963	296 aa	Predicted RBP	13.64	□□□□□ -0.23
YPS1	YLR120C	RPC17	P47076	161 aa		13.64	□□□□□ -0.23
YPS1	YLR120C	RRT6	P53117	311 aa	Predicted RBP	13.64	□□□□□ -0.23
YPS1	YLR120C	TAM41	P53230	385 aa		13.64	□□□□□ -0.23
YPS1	YLR120C	RAD1	P06777	1100 aa		13.64	□□□□□ -0.23
YPS1	YLR120C	VMA2	P16140	517 aa	Known RBP	13.64	□□□□□ -0.23
YPS1	YLR120C	NAM7	P30771	971 aa	Known RBP	13.64	□□□□□ -0.23
YPS1	YLR120C	MUD1	P32605	298 aa	Known RBP	13.64	□□□□□ -0.23
YPS1	YLR120C	VPS35	P34110	944 aa		13.64	□□□□□ -0.23
YPS1	YLR120C	PTC4	P38089	393 aa		13.64	□□□□□ -0.23
YPS1	YLR120C	UBP15	P50101	1230 aa		13.64	□□□□□ -0.23
YPS1	YLR120C	JJJ1	P53863	590 aa		13.64	□□□□□ -0.23
YPS1	YLR120C	OMS1	Q06668	471 aa		13.64	□□□□□ -0.23
YPS1	YLR120C	NOC3	Q07896	663 aa	Predicted RBP	13.64	□□□□□ -0.23
YPS1	YLR120C	RUD3	Q12234	484 aa	Known RBP	13.64	□□□□□ -0.23
YPS1	YLR120C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	13.63	□□□□□ -0.23	not detected
YPS1	YLR120C	KIP1	P28742	1111 aa		13.63	□□□□□ -0.23
YPS1	YLR120C	BLI1	P35727	113 aa		13.63	□□□□□ -0.23
YPS1	YLR120C	OLA1	P38219	394 aa	Known RBP	13.63	□□□□□ -0.23
YPS1	YLR120C	RCK2	P38623	610 aa		13.63	□□□□□ -0.23
YPS1	YLR120C	RAD26	P40352	1085 aa		13.63	□□□□□ -0.23
YPS1	YLR120C	AVT1	P47082	602 aa		13.63	□□□□□ -0.23
YPS1	YLR120C	VTC3	Q02725	835 aa		13.63	□□□□□ -0.23
YPS1	YLR120C	APL5	Q08951	932 aa	Known RBP	13.63	□□□□□ -0.23
YPS1	YLR120C	SLX4	Q12098	748 aa		13.63	□□□□□ -0.23
YPS1	YLR120C	TRZ1	P36159	838 aa	Predicted RBP	13.62	□□□□□ -0.23
YPS1	YLR120C	VPS53	P47061	822 aa		13.62	□□□□□ -0.23
YPS1	YLR120C	MRS2	Q01926	470 aa		13.62	□□□□□ -0.23
YPS1	YLR120C	ECI1	Q05871	280 aa		13.62	□□□□□ -0.23
YPS1	YLR120C	SMC5	Q08204	1093 aa		13.62	□□□□□ -0.23
YPS1	YLR120C	YDL206W	Q12424	762 aa		13.62	□□□□□ -0.23
YPS1	YLR120C	SNF1	P06782	633 aa	Known RBP	13.61	□□□□□ -0.23
YPS1	YLR120C	TKL1	P23254	680 aa	Known RBP	13.61	□□□□□ -0.23
YPS1	YLR120C	REG2	P38232	338 aa		13.61	□□□□□ -0.23
YPS1	YLR120C	RGD1	P38339	666 aa		13.61	□□□□□ -0.23
YPS1	YLR120C	PSY2	P40164	858 aa		13.61	□□□□□ -0.23
YPS1	YLR120C	ENV11	P53246	860 aa		13.61	□□□□□ -0.23
YPS1	YLR120C	COT1	P32798	439 aa		13.61	□□□□□ -0.23
YPS1	YLR120C	BCH2	P36122	765 aa		13.61	□□□□□ -0.23
YPS1	YLR120C	GPB2	P39717	880 aa		13.61	□□□□□ -0.23
YPS1	YLR120C	HMF1	P40037	129 aa	Known RBP	13.61	□□□□□ -0.23
YPS1	YLR120C	RNT1	Q02555	471 aa		13.61	□□□□□ -0.23
YPS1	YLR120C	ERP3	Q12403	225 aa		13.61	□□□□□ -0.23
YPS1	YLR120C	SPT2	P06843	333 aa	Predicted RBP	13.6	□□□□□ -0.23
YPS1	YLR120C	CDC33	P07260	213 aa	Known RBP	13.6	□□□□□ -0.23
YPS1	YLR120C	LAS1	P36146	502 aa	Predicted RBP	13.6	□□□□□ -0.23
YPS1	YLR120C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	13.6	□□□□□ -0.23	not detected
YPS1	YLR120C	EXO5	P38289	585 aa		13.6	□□□□□ -0.23
YPS1	YLR120C	ROD1	Q02805	837 aa		13.6	□□□□□ -0.23
YPS1	YLR120C	SFH1	Q06168	426 aa		13.6	□□□□□ -0.23
YPS1	YLR120C	CDC53	Q12018	815 aa	Known RBP	13.6	□□□□□ -0.23
YPS1	YLR120C	TVP38	P36164	337 aa		13.59	□□□□□ -0.23
YPS1	YLR120C	YGR125W	P53273	1036 aa		13.59	□□□□□ -0.23
YPS1	YLR120C	SPO21	Q12411	609 aa		13.59	□□□□□ -0.23
YPS1	YLR120C	CDC19	P00549	500 aa	Known RBP	13.59	□□□□□ -0.23
YPS1	YLR120C	SEC21	P32074	935 aa	Known RBP	13.59	□□□□□ -0.23
YPS1	YLR120C	UBC6	P33296	250 aa	Predicted RBP	13.59	□□□□□ -0.23
YPS1	YLR120C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	13.59	□□□□□ -0.23	not detected
YPS1	YLR120C	SPP381	P38282	291 aa	Predicted RBP	13.59	□□□□□ -0.23
YPS1	YLR120C	HIS2	P38635	335 aa		13.59	□□□□□ -0.23
YPS1	YLR120C	YAF9	P53930	226 aa		13.59	□□□□□ -0.23
YPS1	YLR120C	DEP1	P31385	405 aa		13.58	□□□□□ -0.24
YPS1	YLR120C	CDC11	P32458	415 aa		13.58	□□□□□ -0.24
YPS1	YLR120C	LCP5	P40079	357 aa	Predicted RBP	13.58	□□□□□ -0.24
YPS1	YLR120C	CLA4	P48562	842 aa		13.58	□□□□□ -0.24
YPS1	YLR120C	RTT102	P53330	157 aa		13.58	□□□□□ -0.24
YPS1	YLR120C	RIO1	Q12196	484 aa	Known RBP	13.58	□□□□□ -0.24
YPS1	YLR120C	VMA1	P17255	1071 aa	Known RBP	13.57	□□□□□ -0.24
YPS1	YLR120C	SPC72	P39723	622 aa		13.57	□□□□□ -0.24
YPS1	YLR120C	NET1	P47035	1189 aa		13.57	□□□□□ -0.24
YPS1	YLR120C	VPS70	P47161	811 aa		13.57	□□□□□ -0.24
YPS1	YLR120C	BRO1	P48582	844 aa		13.57	□□□□□ -0.24
YPS1	YLR120C	HSH155	P49955	971 aa	Known RBP	13.57	□□□□□ -0.24
YPS1	YLR120C	EEB1	Q02891	456 aa		13.57	□□□□□ -0.24
YPS1	YLR120C	SLD5	Q03406	294 aa		13.57	□□□□□ -0.24
YPS1	YLR120C	STE23	Q06010	1027 aa		13.57	□□□□□ -0.24
YPS1	YLR120C	DUS4	Q06063	367 aa		13.57	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms