RNA–Protein interactions for RNA: YKR039W

GAP1, Transcript of General amino acid permease, yeast

Gene GAP1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAP1	YKR039W	YUR1	P26725	428 aa		10.67	□□□□□ -0.7
GAP1	YKR039W	RGT1	P32862	1170 aa		10.67	□□□□□ -0.7
GAP1	YKR039W	JNM1	P36224	373 aa		10.67	□□□□□ -0.7
GAP1	YKR039W	RPS0B	P46654	252 aa	Known RBP	10.67	□□□□□ -0.7
GAP1	YKR039W	ATG1	P53104	897 aa		10.67	□□□□□ -0.7
GAP1	YKR039W	RTT102	P53330	157 aa		10.67	□□□□□ -0.7
GAP1	YKR039W	BOP3	P53958	396 aa		10.67	□□□□□ -0.7
GAP1	YKR039W	CSR1	Q06705	408 aa	Known RBP	10.67	□□□□□ -0.7
GAP1	YKR039W	SRB4	P32569	687 aa		10.66	□□□□□ -0.7
GAP1	YKR039W	MOT2	P34909	587 aa	Known RBP	10.66	□□□□□ -0.7
GAP1	YKR039W	EAF5	P39995	279 aa		10.66	□□□□□ -0.7
GAP1	YKR039W	OSW2	Q12202	724 aa		10.66	□□□□□ -0.7
GAP1	YKR039W	MUD1	P32605	298 aa	Known RBP	10.65	□□□□□ -0.7
GAP1	YKR039W	MMM1	P41800	426 aa		10.65	□□□□□ -0.7
GAP1	YKR039W	VTC3	Q02725	835 aa		10.65	□□□□□ -0.7
GAP1	YKR039W	TSR1	Q07381	788 aa	Known RBP	10.65	□□□□□ -0.7
GAP1	YKR039W	IES4	Q08561	116 aa		10.65	□□□□□ -0.7
GAP1	YKR039W	CDC53	Q12018	815 aa	Known RBP	10.65	□□□□□ -0.7
GAP1	YKR039W	DAS2	Q12084	232 aa		10.65	□□□□□ -0.7
GAP1	YKR039W	IRE1	P32361	1115 aa		10.65	□□□□□ -0.71
GAP1	YKR039W	MXR1	P40029	184 aa		10.65	□□□□□ -0.71
GAP1	YKR039W	SOV1	Q04748	898 aa		10.65	□□□□□ -0.71
GAP1	YKR039W	STE11	P23561	717 aa		10.64	□□□□□ -0.71
GAP1	YKR039W	RME1	P32338	300 aa	Known RBP	10.64	□□□□□ -0.71
GAP1	YKR039W	HXT1	P32465	570 aa		10.64	□□□□□ -0.71
GAP1	YKR039W	REI1	P38344	393 aa	Predicted RBP	10.64	□□□□□ -0.71
GAP1	YKR039W	YMR124W	P39523	943 aa	Known RBP	10.64	□□□□□ -0.71
GAP1	YKR039W	YLR001C	Q07895	862 aa		10.64	□□□□□ -0.71
GAP1	YKR039W	CKI1	P20485	582 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	DPB3	P27344	201 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	HXT8	P40886	569 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	PSP2	P50109	593 aa	Known RBP	10.63	□□□□□ -0.71
GAP1	YKR039W	ESBP6	P53918	673 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	10.63	□□□□□ -0.71	not detected
GAP1	YKR039W	UTP14	Q04500	899 aa	Known RBP	10.63	□□□□□ -0.71
GAP1	YKR039W	MET7	Q08645	548 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	10.63	□□□□□ -0.71	not detected
GAP1	YKR039W	EFT1	P32324	842 aa	Known RBP	10.63	□□□□□ -0.71
GAP1	YKR039W	YEL043W	P32618	956 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	TIM23	P32897	222 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	TCD1	P38756	429 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	HSH155	P49955	971 aa	Known RBP	10.63	□□□□□ -0.71
GAP1	YKR039W	SCS3	P53012	380 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	YNL146W	P53906	100 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	NGL3	Q03210	505 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	YLR225C	Q05948	407 aa	Known RBP	10.63	□□□□□ -0.71
GAP1	YKR039W	SLX4	Q12098	748 aa		10.63	□□□□□ -0.71
GAP1	YKR039W	VMA1	P17255	1071 aa	Known RBP	10.62	□□□□□ -0.71
GAP1	YKR039W	KIP1	P28742	1111 aa		10.62	□□□□□ -0.71
GAP1	YKR039W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	10.62	□□□□□ -0.71	not detected
GAP1	YKR039W	BUD16	P39988	312 aa		10.62	□□□□□ -0.71
GAP1	YKR039W	SHE10	P53075	577 aa		10.62	□□□□□ -0.71
GAP1	YKR039W	YML082W	Q04533	649 aa	Known RBP	10.62	□□□□□ -0.71
GAP1	YKR039W	NOP14	Q99207	810 aa	Known RBP	10.62	□□□□□ -0.71
GAP1	YKR039W	TRP2	P00899	507 aa	Known RBP	10.61	□□□□□ -0.71
GAP1	YKR039W	KIN82	P25341	720 aa		10.61	□□□□□ -0.71
GAP1	YKR039W	RAD54	P32863	898 aa		10.61	□□□□□ -0.71
GAP1	YKR039W	ETP1	P38748	585 aa	Known RBP	10.61	□□□□□ -0.71
GAP1	YKR039W	SET5	P38890	526 aa	Known RBP	10.61	□□□□□ -0.71
GAP1	YKR039W	NPP2	P39997	493 aa		10.61	□□□□□ -0.71
GAP1	YKR039W	MAL13	P53338	473 aa		10.61	□□□□□ -0.71
GAP1	YKR039W	YDR090C	Q03193	310 aa		10.61	□□□□□ -0.71
GAP1	YKR039W	YDL206W	Q12424	762 aa		10.61	□□□□□ -0.71
GAP1	YKR039W	TIF6	Q12522	245 aa	Known RBP	10.61	□□□□□ -0.71
GAP1	YKR039W	POX1	P13711	748 aa		10.61	□□□□□ -0.71
GAP1	YKR039W	KIC1	P38692	1080 aa		10.61	□□□□□ -0.71
GAP1	YKR039W	ACF4	P47129	309 aa		10.61	□□□□□ -0.71
GAP1	YKR039W	DPH2	P32461	534 aa		10.6	□□□□□ -0.71
GAP1	YKR039W	FLR1	P38124	548 aa		10.6	□□□□□ -0.71
GAP1	YKR039W	PRP31	P49704	494 aa	Predicted RBP	10.6	□□□□□ -0.71
GAP1	YKR039W	ORC5	P50874	479 aa		10.6	□□□□□ -0.71
GAP1	YKR039W	CUL3	P53202	744 aa		10.6	□□□□□ -0.71
GAP1	YKR039W	YGR021W	P53212	290 aa		10.6	□□□□□ -0.71
GAP1	YKR039W	SIL1	Q08199	421 aa		10.6	□□□□□ -0.71
GAP1	YKR039W	HIF1	Q12373	385 aa		10.6	□□□□□ -0.71
GAP1	YKR039W	RRP1	P35178	278 aa	Predicted RBP	10.59	□□□□□ -0.71
GAP1	YKR039W	GUA1	P38625	525 aa	Known RBP	10.59	□□□□□ -0.71
GAP1	YKR039W	SMF1	P38925	575 aa		10.59	□□□□□ -0.71
GAP1	YKR039W	ENV11	P53246	860 aa		10.59	□□□□□ -0.71
GAP1	YKR039W	SNF1	P06782	633 aa	Known RBP	10.58	□□□□□ -0.72
GAP1	YKR039W	MAS2	P11914	482 aa		10.58	□□□□□ -0.72
GAP1	YKR039W	SMY2	P32909	740 aa	Known RBP	10.58	□□□□□ -0.72
GAP1	YKR039W	TCB2	P48231	1178 aa		10.58	□□□□□ -0.72
GAP1	YKR039W	ASN1	P49089	572 aa	Known RBP	10.58	□□□□□ -0.72
GAP1	YKR039W	BTN2	P53286	410 aa		10.58	□□□□□ -0.72
GAP1	YKR039W	TBF1	Q02457	562 aa		10.58	□□□□□ -0.72
GAP1	YKR039W	HFI1	Q12060	488 aa		10.58	□□□□□ -0.72
GAP1	YKR039W	CDC33	P07260	213 aa	Known RBP	10.58	□□□□□ -0.72
GAP1	YKR039W	SWI3	P32591	825 aa		10.58	□□□□□ -0.72
GAP1	YKR039W	BYE1	P36106	594 aa		10.58	□□□□□ -0.72
GAP1	YKR039W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	10.58	□□□□□ -0.72	not detected
GAP1	YKR039W	RPA49	Q01080	415 aa	Predicted RBP	10.58	□□□□□ -0.72
GAP1	YKR039W	SYH1	Q02875	849 aa	Known RBP	10.58	□□□□□ -0.72
GAP1	YKR039W	RRB1	Q04225	511 aa	Known RBP	10.58	□□□□□ -0.72
GAP1	YKR039W	ECM7	Q06200	448 aa		10.58	□□□□□ -0.72
GAP1	YKR039W	RGA2	Q06407	1009 aa		10.58	□□□□□ -0.72
GAP1	YKR039W	TRZ1	P36159	838 aa	Predicted RBP	10.57	□□□□□ -0.72
GAP1	YKR039W	KSP1	P38691	1029 aa	Known RBP	10.57	□□□□□ -0.72
GAP1	YKR039W	JJJ3	P47138	172 aa		10.57	□□□□□ -0.72
GAP1	YKR039W	IWR1	Q07532	353 aa	Predicted RBP	10.57	□□□□□ -0.72

Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms