RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeast

Gene YPT52, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT52	YKR014C	TAF8	Q03750	510 aa		4.84	□□□□□ -1.63
YPT52	YKR014C	BUL2	Q03758	920 aa	Known RBP	4.84	□□□□□ -1.63
YPT52	YKR014C	NPC2	Q12408	173 aa		4.84	□□□□□ -1.63
YPT52	YKR014C	DCG1	P32460	244 aa		4.83	□□□□□ -1.64
YPT52	YKR014C	TRM2	P33753	639 aa		4.83	□□□□□ -1.64
YPT52	YKR014C	ERT1	P38140	529 aa		4.83	□□□□□ -1.64
YPT52	YKR014C	CHZ1	P40019	153 aa	Predicted RBP	4.83	□□□□□ -1.64
YPT52	YKR014C	YIL108W	P40483	696 aa	Known RBP	4.83	□□□□□ -1.64
YPT52	YKR014C	NCS6	P53088	359 aa		4.83	□□□□□ -1.64
YPT52	YKR014C	PUS2	P53167	370 aa		4.83	□□□□□ -1.64
YPT52	YKR014C	DAM1	P53267	343 aa		4.83	□□□□□ -1.64
YPT52	YKR014C	YKR011C	Q02209	353 aa		4.83	□□□□□ -1.64
YPT52	YKR014C	WHI4	Q07655	649 aa	Known RBP	4.83	□□□□□ -1.64
YPT52	YKR014C	GUP2	Q08929	609 aa		4.83	□□□□□ -1.64
YPT52	YKR014C	KCS1	Q12494	1050 aa		4.83	□□□□□ -1.64
YPT52	YKR014C	CAN1	P04817	590 aa		4.82	□□□□□ -1.64
YPT52	YKR014C	PFK1	P16861	987 aa	Known RBP	4.82	□□□□□ -1.64
YPT52	YKR014C	CAD1	P24813	409 aa	Known RBP	4.82	□□□□□ -1.64
YPT52	YKR014C	URA1	P28272	314 aa	Predicted RBP	4.82	□□□□□ -1.64
YPT52	YKR014C	NOG2	P53742	486 aa	Known RBP	4.82	□□□□□ -1.64
YPT52	YKR014C	UPC2	Q12151	913 aa		4.82	□□□□□ -1.64
YPT52	YKR014C	PMA1	P05030	918 aa	Known RBP	4.81	□□□□□ -1.64
YPT52	YKR014C	TOP3	P13099	656 aa		4.81	□□□□□ -1.64
YPT52	YKR014C	YKL091C	P33324	310 aa	Known RBP	4.81	□□□□□ -1.64
YPT52	YKR014C	EXG2	P52911	562 aa		4.81	□□□□□ -1.64
YPT52	YKR014C	SSL1	Q04673	461 aa	Predicted RBP	4.81	□□□□□ -1.64
YPT52	YKR014C	AIM39	Q08223	395 aa		4.81	□□□□□ -1.64
YPT52	YKR014C	ENB1	Q08299	606 aa		4.81	□□□□□ -1.64
YPT52	YKR014C	NTO1	Q12311	748 aa		4.81	□□□□□ -1.64
YPT52	YKR014C	PMI40	P29952	429 aa	Known RBP	4.8	□□□□□ -1.64
YPT52	YKR014C	RPD3	P32561	433 aa		4.8	□□□□□ -1.64
YPT52	YKR014C	ALG2	P43636	503 aa		4.8	□□□□□ -1.64
YPT52	YKR014C	YDR514C	Q04408	483 aa		4.8	□□□□□ -1.64
YPT52	YKR014C	ENV7	Q12003	364 aa		4.8	□□□□□ -1.64
YPT52	YKR014C	CYS3	P31373	394 aa	Known RBP	4.79	□□□□□ -1.64
YPT52	YKR014C	EMC3	P36039	253 aa		4.79	□□□□□ -1.64
YPT52	YKR014C	OCA5	P38738	679 aa		4.79	□□□□□ -1.64
YPT52	YKR014C	SDP1	P40479	209 aa		4.79	□□□□□ -1.64
YPT52	YKR014C	PHO23	P50947	330 aa		4.79	□□□□□ -1.64
YPT52	YKR014C	SWM1	Q12379	170 aa		4.79	□□□□□ -1.64
YPT52	YKR014C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
YPT52	YKR014C	FBP1	P09201	348 aa		4.78	□□□□□ -1.64
YPT52	YKR014C	DAL7	P21826	554 aa		4.78	□□□□□ -1.64
YPT52	YKR014C	KAR4	P25583	335 aa		4.78	□□□□□ -1.64
YPT52	YKR014C	SAP190	P36123	1033 aa		4.78	□□□□□ -1.64
YPT52	YKR014C	BET3	P36149	193 aa		4.78	□□□□□ -1.64
YPT52	YKR014C	OSW7	P43611	510 aa		4.78	□□□□□ -1.64
YPT52	YKR014C	HDA1	P53973	706 aa		4.78	□□□□□ -1.64
YPT52	YKR014C	REH1	Q06709	432 aa		4.78	□□□□□ -1.64
YPT52	YKR014C	DEF1	P35732	738 aa	Known RBP	4.77	□□□□□ -1.65
YPT52	YKR014C	MSE1	P48525	536 aa		4.77	□□□□□ -1.65
YPT52	YKR014C	YGR283C	P53336	341 aa	Predicted RBP	4.77	□□□□□ -1.65
YPT52	YKR014C	RPN4	Q03465	531 aa		4.77	□□□□□ -1.65
YPT52	YKR014C	PEX19	Q07418	342 aa		4.77	□□□□□ -1.65
YPT52	YKR014C	PNS1	Q12412	539 aa		4.77	□□□□□ -1.65
YPT52	YKR014C	PRC1	P00729	532 aa		4.76	□□□□□ -1.65
YPT52	YKR014C	NGG1	P32494	702 aa		4.76	□□□□□ -1.65
YPT52	YKR014C	STE14	P32584	239 aa		4.76	□□□□□ -1.65
YPT52	YKR014C	CTF8	P38877	133 aa		4.76	□□□□□ -1.65
YPT52	YKR014C	AIM21	P40563	679 aa		4.76	□□□□□ -1.65
YPT52	YKR014C	RTA1	P53047	317 aa		4.76	□□□□□ -1.65
YPT52	YKR014C	HRR25	P29295	494 aa	Known RBP	4.75	□□□□□ -1.65
YPT52	YKR014C	YHR078W	P38799	552 aa		4.75	□□□□□ -1.65
YPT52	YKR014C	HSV2	P50079	448 aa	Predicted RBP	4.75	□□□□□ -1.65
YPT52	YKR014C	ZDS1	P50111	915 aa	Known RBP	4.75	□□□□□ -1.65
YPT52	YKR014C	TAD1	P53065	400 aa		4.75	□□□□□ -1.65
YPT52	YKR014C	PUS9	Q12069	462 aa		4.75	□□□□□ -1.65
YPT52	YKR014C	RAD53	P22216	821 aa		4.74	□□□□□ -1.65
YPT52	YKR014C	SPC29	P33419	253 aa		4.74	□□□□□ -1.65
YPT52	YKR014C	PZF1	P39933	429 aa		4.74	□□□□□ -1.65
YPT52	YKR014C	SHR5	P41912	237 aa		4.74	□□□□□ -1.65
YPT52	YKR014C	GYP8	P43570	497 aa		4.74	□□□□□ -1.65
YPT52	YKR014C	DUS1	P53759	423 aa	Known RBP	4.74	□□□□□ -1.65
YPT52	YKR014C	ATP25	Q03153	612 aa		4.74	□□□□□ -1.65
YPT52	YKR014C	RSC3	Q06639	885 aa		4.74	□□□□□ -1.65
YPT52	YKR014C	TRP4	P07285	380 aa	Predicted RBP	4.73	□□□□□ -1.65
YPT52	YKR014C	SEC21	P32074	935 aa	Known RBP	4.73	□□□□□ -1.65
YPT52	YKR014C	EFT1	P32324	842 aa	Known RBP	4.73	□□□□□ -1.65
YPT52	YKR014C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
YPT52	YKR014C	SET5	P38890	526 aa	Known RBP	4.73	□□□□□ -1.65
YPT52	YKR014C	MSS4	P38994	779 aa		4.73	□□□□□ -1.65
YPT52	YKR014C	MET7	Q08645	548 aa		4.73	□□□□□ -1.65
YPT52	YKR014C	YLR125W	Q12138	136 aa		4.73	□□□□□ -1.65
YPT52	YKR014C	HAL9	Q12180	1030 aa		4.73	□□□□□ -1.65
YPT52	YKR014C	YOR022C	Q12204	715 aa		4.73	□□□□□ -1.65
YPT52	YKR014C	TRM11	Q12463	433 aa		4.73	□□□□□ -1.65
YPT52	YKR014C	KTR4	P38131	464 aa		4.72	□□□□□ -1.65
YPT52	YKR014C	GDH3	P39708	457 aa		4.72	□□□□□ -1.65
YPT52	YKR014C	SUN4	P53616	420 aa		4.72	□□□□□ -1.65
YPT52	YKR014C	PKH1	Q03407	766 aa		4.72	□□□□□ -1.65
YPT52	YKR014C	DIF1	O13577	133 aa		4.71	□□□□□ -1.66
YPT52	YKR014C	PHO8	P11491	566 aa		4.71	□□□□□ -1.66
YPT52	YKR014C	GSY1	P23337	708 aa		4.71	□□□□□ -1.66
YPT52	YKR014C	TIM23	P32897	222 aa		4.71	□□□□□ -1.66
YPT52	YKR014C	CTF13	P35203	478 aa		4.71	□□□□□ -1.66
YPT52	YKR014C	NUP82	P40368	713 aa		4.71	□□□□□ -1.66
YPT52	YKR014C	VHR1	P40522	640 aa		4.71	□□□□□ -1.66
YPT52	YKR014C	RLP7	P40693	322 aa	Known RBP	4.71	□□□□□ -1.66
YPT52	YKR014C	SSY5	P47002	699 aa		4.71	□□□□□ -1.66
YPT52	YKR014C	LRS4	Q04087	347 aa	Known RBP	4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 137.5 ms